KEGG   PATHWAY: sgh03050
Entry
sgh03050                    Pathway                                
Name
Proteasome - Sinocyclocheilus grahami (golden-line barbel)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
sgh03050  Proteasome
sgh03050

Other DBs
GO: 0000502
Organism
Sinocyclocheilus grahami (golden-line barbel) [GN:sgh]
Gene
107570970  26S proteasome non-ATPase regulatory subunit 3-like [KO:K03033]
107573823  26S proteasome non-ATPase regulatory subunit 3-like [KO:K03033]
107576945  26S proteasome non-ATPase regulatory subunit 9-like [KO:K06693]
107550185  psmd9; 26S proteasome non-ATPase regulatory subunit 9 isoform X1 [KO:K06693]
107569449  26S proteasome non-ATPase regulatory subunit 12-like [KO:K03035]
107586340  psmd12; 26S proteasome non-ATPase regulatory subunit 12 isoform X1 [KO:K03035]
107601249  26S proteasome non-ATPase regulatory subunit 11A [KO:K03036]
107590443  26S proteasome non-ATPase regulatory subunit 11A-like [KO:K03036]
107566634  26S proteasome non-ATPase regulatory subunit 11B-like [KO:K03036]
107568948  26S proteasome non-ATPase regulatory subunit 11B [KO:K03036]
107577372  26S proteasome non-ATPase regulatory subunit 11A-like [KO:K03036]
107590178  26S proteasome non-ATPase regulatory subunit 6-like [KO:K03037]
107550942  psmd6; 26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
107584693  26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
107553010  26S proteasome non-ATPase regulatory subunit 7 [KO:K03038]
107581813  psmd13; 26S proteasome non-ATPase regulatory subunit 13 [KO:K03039]
107583134  26S proteasome non-ATPase regulatory subunit 13-like [KO:K03039]
107563735  26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
107593137  26S proteasome non-ATPase regulatory subunit 14 [KO:K03030]
107565104  26S proteasome non-ATPase regulatory subunit 8-like [KO:K03031]
107554985  26S proteasome non-ATPase regulatory subunit 8-like [KO:K03031]
107593584  shfm1; 26S proteasome complex subunit DSS1 [KO:K10881]
107564869  26S proteasome non-ATPase regulatory subunit 4-like [KO:K03029]
107596690  26S proteasome non-ATPase regulatory subunit 4-like [KO:K03029]
107599594  26S proteasome non-ATPase regulatory subunit 4-like [KO:K03029]
107565570  26S proteasome non-ATPase regulatory subunit 4-like [KO:K03029]
107575965  26S proteasome non-ATPase regulatory subunit 2-like [KO:K03028]
107600806  psmd2; 26S proteasome non-ATPase regulatory subunit 2 [KO:K03028]
107566382  26S proteasome non-ATPase regulatory subunit 1 isoform X1 [KO:K03032]
107550670  26S proteasome non-ATPase regulatory subunit 1-like [KO:K03032]
107571042  proteasomal ubiquitin receptor ADRM1-like isoform X1 [KO:K06691]
107559850  adrm1; proteasomal ubiquitin receptor ADRM1 [KO:K06691]
107549070  proteasomal ubiquitin receptor ADRM1-like [KO:K06691]
107587164  26S protease regulatory subunit 7 [KO:K03061]
107583993  26S protease regulatory subunit 7-like [KO:K03061]
107581524  26S protease regulatory subunit 4-like [KO:K03062]
107589657  26S protease regulatory subunit 4-like [KO:K03062]
107586579  26S protease regulatory subunit 4 isoform X1 [KO:K03062]
107560539  psmc5; 26S protease regulatory subunit 8 [KO:K03066]
107569174  26S protease regulatory subunit 8-like [KO:K03066]
107549540  26S protease regulatory subunit 10B [KO:K03064]
107582103  26S protease regulatory subunit 10B-like [KO:K03064]
107560088  26S protease regulatory subunit 6A-like [KO:K03065]
107554624  psmc3; 26S protease regulatory subunit 6A [KO:K03065]
107600524  psmc4; 26S protease regulatory subunit 6B [KO:K03063]
107592142  26S protease regulatory subunit 6B-like [KO:K03063]
107560248  proteasome activator complex subunit 1-like isoform X1 [KO:K06696]
107589994  proteasome activator complex subunit 1-like [KO:K06696]
107551845  proteasome activator complex subunit 2-like [KO:K06697]
107556770  proteasome activator complex subunit 2-like [KO:K06697]
107552743  proteasome activator complex subunit 3 [KO:K06698]
107582747  proteasome activator complex subunit 3-like isoform X1 [KO:K06698]
107602941  proteasome activator complex subunit 4A isoform X1 [KO:K06699]
107549400  proteasome activator complex subunit 4B-like [KO:K06699]
107584369  proteasome activator complex subunit 4B isoform X1 [KO:K06699]
107553194  LOW QUALITY PROTEIN: proteasome activator complex subunit 4A-like [KO:K06699]
107572211  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
107597861  proteasome subunit alpha type-6 isoform X1 [KO:K02730] [EC:3.4.25.1]
107586679  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
107580710  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
107578527  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
107589641  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
107580398  proteasome subunit alpha type-2-like [KO:K02726] [EC:3.4.25.1]
107592434  proteasome subunit alpha type-2-like [KO:K02726] [EC:3.4.25.1]
107556413  proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
107556948  proteasome subunit alpha type-2-like [KO:K02726] [EC:3.4.25.1]
107562288  proteasome subunit alpha type-4-like [KO:K02728] [EC:3.4.25.1]
107560014  proteasome subunit alpha type-4 [KO:K02728] [EC:3.4.25.1]
107572146  proteasome subunit alpha type-7 [KO:K02731] [EC:3.4.25.1]
107561039  proteasome subunit alpha type-7-like [KO:K02731] [EC:3.4.25.1]
107582453  proteasome subunit alpha type-5-like [KO:K02729] [EC:3.4.25.1]
107577240  psma5; proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
107575934  psma1; proteasome subunit alpha type-1 [KO:K02725] [EC:3.4.25.1]
107566829  proteasome subunit alpha type-1-like [KO:K02725] [EC:3.4.25.1]
107566830  proteasome subunit alpha type-1-like [KO:K02725] [EC:3.4.25.1]
107586649  psma3; proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
107589621  proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
107574535  proteasome subunit beta type-6-like [KO:K02738] [EC:3.4.25.1]
107573931  psmb6; proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
107566642  proteasome subunit beta type-6-B like protein isoform X1 [KO:K02738] [EC:3.4.25.1]
107565228  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107554339  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107554343  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107585378  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107584569  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107563209  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107566641  proteasome subunit beta type-7-like [KO:K02739] [EC:3.4.25.1]
107562231  psmb3; proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
107586359  proteasome subunit beta type-3-like [KO:K02735] [EC:3.4.25.1]
107592948  proteasome subunit beta type-2-like isoform X1 [KO:K02734] [EC:3.4.25.1]
107591978  proteasome subunit beta type-2-like [KO:K02734] [EC:3.4.25.1]
107591435  proteasome subunit beta type-5-like [KO:K02737] [EC:3.4.25.1]
107558100  proteasome subunit beta type-5-like [KO:K02737] [EC:3.4.25.1]
107561981  proteasome subunit beta type-1-A-like [KO:K02732] [EC:3.4.25.1]
107597712  proteasome subunit beta type-1-A [KO:K02732] [EC:3.4.25.1]
107593590  proteasome subunit beta type-4-like isoform X1 [KO:K02736] [EC:3.4.25.1]
107591614  proteasome subunit beta type-4-like [KO:K02736] [EC:3.4.25.1]
107549857  proteasome subunit beta type-9-like [KO:K02741] [EC:3.4.25.1]
107566623  proteasome subunit beta type-9-like [KO:K02741] [EC:3.4.25.1]
107574275  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
107554342  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
107549856  proteasome subunit beta type-8-like [KO:K02740] [EC:3.4.25.1]
107559243  proteasome subunit beta type-11-like [KO:K11598] [EC:3.4.25.1]
107549161  proteasome subunit beta type-11-like [KO:K11598] [EC:3.4.25.1]
107596848  proteasome inhibitor PI31 subunit-like [KO:K06700]
107584174  psmf1; proteasome inhibitor PI31 subunit [KO:K06700]
107590083  proteasome maturation protein-like [KO:K11599]
107588765  proteasome maturation protein-like isoform X1 [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
sgh04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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