Sinocyclocheilus grahami (golden-line barbel): 107548129
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Entry
107548129 CDS
T04918
Symbol
trpc6
Name
(RefSeq) short transient receptor potential channel 6
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107548129 (trpc6)
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107548129 (trpc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
DUF3150
RIN1
YVC1_C
Motif
Other DBs
NCBI-GeneID:
107548129
NCBI-ProteinID:
XP_016084166
UniProt:
A0A672S809
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MNQRRPVLEDGNQSNYHTIEKRNRSKDNLLMNEDFGEDCYGSYGHYHGENLARQALPKSR
RQAVRGAAYMFNAHPNSLTPIEERFLDAAEYGNIPVVRRMLEEIPELDVNCVDYMGQNAL
QLAVANEHLEVTELLLKKDNLSRIGDALLLAISKGYTRIVEAILSHKAFADSKRLTASPS
QAPMHDDFFAYDEDGTRFSHDVTPIILASHCHEYEIVHILLGMGACIEQPHDYFCACNTC
NYHQKYDSFSHSRSRINAYRGLASPAYLSLSNEDPVLAALELSNELASLANIEKEFKNEY
GKLSIQCKDFVVGLLDLCRSTEEVEAILNGEEDETLEVPGRPSLIRLKLAIKYEMKKFVA
HPNCQQQLLSIWYENLPGLRQQTTAIKFLVVLGVAIGLPFLAMVYWVAPCSKMGKIMRGP
FLKFVAHAASFTIFLGLLVMNAADRFDGTKLLPNMTIHDYPTQLFRMKTTPFTWMEMLII
SWVIGMIWAECKEIWSQGPREYLLELWNLLDFGMLAIFVASFISRIMAFWHASVAQCYVD
EHYTDLTNVTLPFEVGYFQLARINWLPSDPQLASEGLYAIAVVLSFSRIAYILPANESFG
PLQISLGRTVKDIFKFMVIFILVFLAFMIGMFNLFSYYRGAKQNEAFTTVEESFKTLFWA
IFGLSEVKSVIVNNGHKFIENTGYVLYGVYNVTVVIVLLNMLIAMINNSFQEIEDDADVE
WKFARSKLWFTYFEEGRTLPVPFNLVPSPKSVLGLVMGAKGLLQELFNRHKAIMKGSELS
ELGQSKTCQDKSLPSSSRYQKIMKRLVKRYIIKAQNDKECDEVNEGELKEIKQDISSLRY
ELLEEKSHNMEQLAKLVRTLEKNLSQDCLILKSN
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaggagacctgttctggaggatggaaatcaatcaaattatcacacaattgaa
aagaggaacagaagtaaagacaatctactgatgaacgaagactttggagaggactgttat
ggcagttatggacactaccatggtgagaacctggccagacaggctttacccaagagcaga
aggcaggcggtgcgaggggcagcctacatgttcaatgcccatcccaacagcctaacccca
atagaggaacgtttccttgatgccgccgagtatggaaacatacctgtggtgcgccgaatg
cttgaggagatccctgagctggacgttaactgtgtggactacatgggccagaatgcattg
cagttggcggtggcaaacgagcacttagaagtaacagaactcctgttgaagaaagacaac
ctgtcgcgtattggggatgcacttttgttggccatcagcaaaggatacaccaggattgtc
gaggccattttgagccacaaagctttcgccgactccaagagactcacagcgagccctagt
caggctccaatgcatgatgacttttttgcatacgacgaagatggcactcgcttttctcat
gatgtcactccaatcattttagcatctcattgtcacgaatatgaaatcgtgcacattctt
ctgggaatgggtgcttgcattgagcagccacatgactacttttgtgcctgcaacacctgc
aattatcatcaaaagtatgattctttctcccactcccgctcacgtatcaatgcgtacagg
ggattggccagtccagcgtacctctctctgtccaatgaggatcctgtgttggcggccctg
gagctcagtaatgagctggcttccttggccaatattgaaaaagaatttaagaatgaatat
gggaaactttctatacaatgcaaagactttgttgtggggcttctggacctgtgtcggagt
acagaggaagtggaagccattctgaatggtgaagaggacgagactttagaagtgcctgga
cgaccaagtctcattcgcttaaaactcgcaataaagtacgaaatgaaaaagtttgtggcc
catcctaactgtcaacaacagctcttatcaatatggtacgaaaatctgcccggactcagg
cagcagaccaccgccattaagttcctggtggttttaggtgttgcaatcggacttcccttt
ctagcaatggtgtattgggtggcaccatgcagcaagatgggaaagatcatgcgtggccct
ttccttaagtttgtggcacatgcggcctccttcactattttccttggccttttggtcatg
aacgctgcagaccgctttgatgggacaaagctgcttccaaatatgaccattcatgactat
ccaacgcagctgtttcgtatgaaaacaactccctttacatggatggaaatgcttataatt
tcctgggtcatagggatgatttgggcagagtgcaaggagatctggtcccaaggtccaaga
gaatatctgcttgagctttggaatttgctagactttggaatgttggccatttttgtggca
tccttcatctcaaggataatggctttctggcatgcatctgtagcacaatgctatgttgat
gagcactacactgatttaaccaatgtaactttgccttttgaggtgggatacttccagttg
gctcggattaactggctcccgtctgatcctcagttagcttctgagggcttgtacgccatt
gcagtggtcctgagcttttctcgaattgcgtacatcctgccagcgaatgagagctttgga
ccactgcagatatctttgggacgaactgtgaaggacatcttcaagttcatggttatcttc
attttagtctttctggccttcatgattggaatgttcaacctcttctcatattatcggggc
gctaagcagaatgaagctttcacaactgtagaggaaagcttcaaaacattgttttgggca
atatttggcctttctgaagtcaaatcagtaatcgtgaacaatggacacaagttcatcgag
aacactggctatgttctctatggagtttacaatgtcacagtggtcatcgtcctactcaac
atgctcattgctatgatcaacaattcctttcaggaaattgaggatgatgcagatgtggag
tggaagttcgcccggtccaagctttggttcacctactttgaggagggccggactctccct
gtgccttttaacttggttcccagtcccaaatctgttctgggtctggttatgggggctaag
ggtcttttgcaggagcttttcaacagacacaaagccattatgaaggggtctgagctcagt
gagttgggacagagcaaaacttgccaggacaaatctcttcctagctccagtcgatatcag
aaaattatgaagcgtcttgttaagcgatatatcatcaaagctcaaaatgacaaagaatgt
gatgaagtcaatgaaggtgaactgaaggagattaagcaggacatttcaagccttcgctat
gagttgctggaggaaaagtcacacaacatggagcagctggcaaagctagtgaggacactt
gaaaaaaatctctctcaggactgcttgatactaaaatctaattaa
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