Sinocyclocheilus grahami (golden-line barbel): 107548248
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Entry
107548248 CDS
T04918
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107548248
04020 Calcium signaling pathway
107548248
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107548248
09153 Circulatory system
04260 Cardiac muscle contraction
107548248
04261 Adrenergic signaling in cardiomyocytes
107548248
04270 Vascular smooth muscle contraction
107548248
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107548248
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107548248
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
GPHH
Ca_chan_IQ
PKD_channel
FAM176
Motif
Other DBs
NCBI-GeneID:
107548248
NCBI-ProteinID:
XP_016084368
LinkDB
All DBs
Position
Unknown
AA seq
1649 aa
AA seq
DB search
MDAVPKDGASLADPSKTDTLNSTGSAGQRRAGGAKKHTQANKSALRAPRALCCLTLSNPI
RMAALALVEWKPFDIFILLAIFANCVALGVSKPFPEDDSNATNHNLMNDSIGFELPWIYF
VSLVIFGSFFVLNLVLGVLSGEFSKEREKAVCRGELQEAQEKQQMEEDMIGYMDWLIEAE
DMDEDGNKRAVVAKKKMMKKYGWYKHSEDGESDSDSEFEAFLDDDGGCCASIMARLMAIS
FCEQLYHLNLVIRKNCRVAVKSTNFYWLVLLLVFLNTAASASEHYGQPQWLTDIQDRANK
ILLALFTLEMLMKLYSFGFQIYFMALFNRFDCFVVCGGILETVLVEMDVIPPIGISVLRC
VRLIRIFKVTRHWAALSDLVSSLLNSMKAICSLLLLLFLFLIIFALLGMQLFGGKFNFDE
TQMKRSTFDTFPSALLTCFQILTGEDWNSVMYDGIMAYGGPIFPNMIVSIYFVILFVCGN
YILLNVFLAIAVDNLAGDGGKKKKEEKKEEEEEWEDDEDREEDEAGNDVDDWEENEELRA
IEGLEGIGTPMKVESFQPKEKIVPIPDGSSFFILGKKNCLRVACHNLIHHHYFTNFILIF
IIFSSFSLAAEDPIKTHSVRNVMLGYADYVFTTVFTIEIMLKMTVYGAFLHQGSFCRNAF
NLLDLLVVSVSLTSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKSVIQCVFVAIRTI
GNILIVTTLLQFMFACIGVQLFKGRFYRCTDEAKHTPEECKGTFVVFKDGDMNHPMVRER
VWENSDFTFDNVLMGMLALFTHYEQSKLFNFVMDILNMIFTTLFTVEMIIKLLALRPYHY
FIDAWNSFDALIVVGSLVDIMIAEFSGGGGHGEGKEGESAKVSITFFRLFRVMRLVKLLS
KGEGIRILLWTFVKSLQALPYVGLLIAMIFFIYGVIGMQTFGKIAIDDSTELNRNNNFQT
FFMAVLLLFRCATGEQWQQIMLAALPGHRCDPESDIEPGEEYSCGSNLAYLYFISFFALC
AFLIINLFIAVIMDNFEYLTRDWTVLGTHHLDEFKRVWSDYDPEATGRIKHLDVVTMLRR
IQPPLGFGKLCPHRVACRRLVAMNVPLHPDGTVSFNATLFALVRTSLKIKTDGPIDQQNE
ELRAIIKKIWKRTKPKLLEEVIPPPSGNEVTAGKFYASFLIQDYFKKFRKRKEKERKKKG
KDKSASLQAGLRTLQDLAPEMRLAIAMEDEEGLEGEMMEEEEFFRSDSVFSDAPPTPAMS
TPRSTPMPPHLDETTVSIELPPRVHSGSFMLEEALMDSRPASALSENTVISEQPQSLSPL
LSRWASSHSKLTPLWILNNNQRTDTTRACDYIPSPSSDGGMQNGGVTGGVITPGGVTGGV
ITPGGVTGGVITPGGVTGGVITPGGVTGGVITPGGVTGVIITLGGVTGGVTGGGEGVTGV
VITPGGVTGGVITPGGVTGGVITLGGVTGGVTGGGEGVTGGEGGVMGGGVTAMPYPTEQG
GVSKEEPQCAVSNDRILISEGLGQYAKDPKFVDFAKREIADACHMTIDEIESAATDLISR
GRAGQATGRFEEDLSDEMNCILISEGLGQYAKDPKFVDFAKREIADACHMTIDEIESAAT
DLISRGRAGQATGRFEEDLSDEMNCVISY
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atggatgcggtaccgaaagatggggccagtttggctgaccccagcaagacggacacactc
aactcaacgggttcagcagggcaaaggagagctggaggagccaagaagcacacacaagct
aacaaatcagcccttcgtgcacccagagctctgtgctgcctcactctcagcaaccctata
cgcatggcagcactggccctggtggagtggaagccttttgatatattcatattattggcc
atctttgctaactgtgttgcccttggtgtgtccaaaccatttcctgaagatgattccaat
gccaccaaccacaatctgatgaatgattctatcggctttgagctgccttggatttatttt
gtgtctctggtcatttttggatctttctttgtcctcaatcttgtgttgggtgtgttgagc
ggtgagttctctaaagagagagagaaggccgtgtgtcgcggtgagctgcaggaggcccag
gagaaacagcagatggaggaggacatgatcggttacatggactggctcatcgaagcagag
gacatggatgaggacggaaataaacgtgctgtggtggctaagaaaaagatgatgaagaaa
tatggctggtacaaacacagtgaagatggagaatcggattcagactctgagtttgaagcg
ttcctggatgatgacggaggctgctgtgcatctataatggcacgactgatggctataagc
ttctgtgagcagctgtaccacttgaatctggtcatcaggaagaactgccgtgtggctgtc
aaatccaccaatttctactggctggtgctgctgctggtgttcctcaacactgccgccagc
gcctctgaacactacggccaaccccagtggctcactgacatacaggaccgagcaaataag
atccttctggctctgtttacgctggagatgctgatgaagctctacagcttcggctttcag
atctacttcatggcgctcttcaaccgtttcgattgtttcgtggtgtgtggtgggattctg
gagacggtgctggtggagatggatgtgatcccgcccatcgggatctctgtgctgcgctgt
gtccgtctgatccgtatcttcaaagtcacaagacactgggctgcactatcagacctggtg
agctctttgctgaactctatgaaggccatttgctccctgctgctgctgctcttcctcttc
ctcatcatcttcgctctcctgggcatgcagctctttggcggaaagttcaactttgatgag
actcaaatgaaaagaagcacctttgacacttttccatctgccctgctcacctgtttccag
atcctaacaggagaggactggaactccgttatgtatgatggcatcatggcgtatggagga
ccaatatttcccaatatgattgtctctatttactttgtcattctttttgtctgtggtaac
tacatcttgttgaatgtcttcttggctatcgctgtggacaacttagccggagacggaggc
aaaaagaaaaaagaggagaaaaaagaagaggaggaggaatgggaggatgatgaagacaga
gaggaagacgaagctggaaatgatgtggacgattgggaagagaacgaagagttgagagca
attgaaggacttgagggtataggcactccaatgaaagttgaaagttttcaacccaaagag
aaaattgtaccaattcctgatggaagttcttttttcatccttggaaagaaaaactgtctc
agagtcgcctgccacaacctcattcatcatcattacttcaccaacttcatcctcatcttc
atcatattcagtagtttttcattggctgctgaagacccaatcaaaactcattctgtcagg
aacgttatgctgggctatgctgattatgtctttaccaccgtcttcactattgagatcatg
ttgaagatgactgtgtatggagctttccttcatcaaggttccttctgcagaaacgccttc
aacctgctggaccttctggtcgtcagcgtatccctcacctctttcttcttgcattcaagt
gccatttctgtggtgaagattcttcgagtattgcgagtgctcaggcctcttcgagccatc
aacagggcaaagggactcaagagcgtgattcagtgtgtgttcgtggccatccgcactatt
ggcaacatcctcatcgtcaccactctcctccagttcatgttcgcttgtattggtgtgcag
cttttcaagggccggttctacagatgtacggatgaggcgaaacatacacccgaagagtgc
aagggcacatttgtggtgttcaaagatggtgatatgaaccatccaatggtgagggagaga
gtttgggagaacagcgactttacctttgacaacgtgttgatggggatgctggcgctcttc
acccactatgagcaatccaaactcttcaactttgtgatggacatcctgaacatgatcttc
actacgctctttactgttgagatgatcatcaaacttctggctctgagaccttatcactat
tttatagatgcctggaactcttttgatgctctgatagtggtgggcagtttggtggacatc
atgatagcagagttcagtggtggaggaggccatggtgaggggaaagaaggggagagtgcc
aaagtgtccatcaccttcttccgccttttccgagttatgcgactggtcaagctgctcagt
aagggtgaaggcattcgaatcctcctttggacctttgttaaatcactacaggcattgcca
tatgttggcttactcattgccatgatctttttcatctatggcgtgattgggatgcagaca
tttgggaagatagcaatagatgacagcacagagctcaatcgaaacaacaatttccaaacc
tttttcatggctgtactgttgctcttcaggtgtgcaacaggtgaacagtggcagcagatc
atgcttgcagcactgccagggcatcgatgtgacccagagtctgacattgagccgggagag
gagtatagctgcggaagcaacctggcgtacctctatttcatcagtttctttgcgctctgt
gccttcctgatcattaacttgttcatcgctgtcatcatggataactttgagtatctgacc
agagactggactgtgctgggcactcatcacctcgatgagtttaaacgagtctggtcagat
tatgacccagaggccacgggacggattaaacatctagatgtagtcaccatgttgcgcaga
attcagcctccgctgggctttgggaaactctgtccacatcgagtagcctgtaggagattg
gttgctatgaatgtgcctctccatcctgacggcactgtgtctttcaatgccactctgttt
gctctcgtcagaacgtcactcaagattaaaacagacggccccattgaccagcagaacgag
gaactgagagctatcattaaaaagatctggaaacgcactaaacccaaacttctagaggaa
gttatacctcctccttcagggaatgaggtgactgcaggaaagttctatgccagcttcctg
attcaggactacttcaaaaaatttcgcaagcgaaaggagaaagagaggaagaagaaaggc
aaggacaagtcagcctctctccaggccgggttacgcacactgcaggatctggccccagag
atgcggctggctatagcgatggaggatgaggaagggctggagggggagatgatggaagaa
gaggagttcttcaggagtgacagtgtcttcagtgatgctcctcccacaccggccatgtcc
actcccagaagcacccctatgccgccccatctggacgagaccacagtgagcattgagctt
cctcctagagtacacagtgggagctttatgctggaggaggccctaatggactcccgcccg
gcctctgccctctccgaaaacacagtgataagtgaacagcctcagagtttgtctcccctg
ctcagcaggtgggcctccagtcacagcaaactcaccccattgtggatactgaataacaac
caaaggactgacacaaccagagcttgtgactatatcccttccccatcctcggatggagga
atgcaaaatggaggagtcacaggaggagtcatcactccgggaggagtcacaggaggagtc
atcactccgggaggagtcacaggaggagtcatcactccgggaggagtcacaggaggagtc
atcactccgggaggagtcacaggaggagtcatcactccgggaggagtcacaggagtcatc
atcactctgggaggagtcacaggaggagtcacaggtggaggtgaaggagtcacaggagtc
gtcatcactccgggaggagtcacaggaggagtcatcactccgggaggagtcacaggagga
gtcatcactctgggaggagtcacaggaggagtcacaggtggaggtgaaggagtcacagga
ggagaagggggagtgatgggaggaggagtcacagcgatgccatatcctacagagcaaggc
ggtgtcagcaaggaggagcctcagtgtgcagtctcaaatgataggatcctgatctctgaa
ggcttgggccaatatgccaaagaccccaaatttgttgactttgcaaagcgggaaattgca
gatgcctgtcacatgactattgatgaaattgagagtgctgcaactgaccttataagtcga
ggaagggcaggacaagcgaccggacgctttgaggaggatctgtctgatgagatgaactgt
atcctgatctctgaaggcttgggccaatatgccaaagaccccaaatttgttgactttgca
aagcgggaaattgcagatgcctgtcacatgactattgatgaaattgagagtgctgcaact
gaccttataagtcgaggaagggcaggacaagcgaccggacgctttgaggaggatctgtct
gatgagatgaactgtgttatatcgtactaa
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integrated database retrieval system
