Sinocyclocheilus grahami (golden-line barbel): 107548286
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Entry
107548286 CDS
T04918
Name
(RefSeq) dermatan-sulfate epimerase-like isoform X1
KO
K01794
chondroitin-glucuronate 5-epimerase [EC:
5.1.3.19
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
sgh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
107548286
Enzymes [BR:
sgh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.19 chondroitin-glucuronate 5-epimerase
107548286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4962
DUF6713
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
107548286
NCBI-ProteinID:
XP_016084403
LinkDB
All DBs
Position
Unknown
AA seq
946 aa
AA seq
DB search
MRTYTRGAPTVFFISALVSLALAGADPSGGIPFLGGNYEGTHPMLYFGQAEVEELQRAAV
GTHKALARQIREAGEAILERPEEYLPPWNPTEFSARWNEVYGNNLGLLSMFCLLYPHRAG
ALEVAKEYMERMAVQPNWMVKDAPWDEVPIAHSLVGFATAYDFLYEYLSKVQQERFLQVI
ANASRYMYEKSYHRGWGFQYLHNHQPTNCVALLTGSLVVMNQGYLQDAYLWTKQALAIME
KSMVLLRDVTDGSLYEGVAYGTYTTRSLFQYMYLVQRHFDIGHFNHPWLHKHFAFLYRTV
LPGFQRTVAIADSNYNWFYGPESQLVFLDRYVMRNGSGNWLAEVIRQNRVLEGPGQAGRG
QRWCTLHTEFLWYDASLQPTPPPDYGTSHLHYFEDWGVVTYGSALPAGRNRTFLSFKSGK
LGGRAIFDIVHQNKYKNWIKGWRNFNAGHEHPDQNSFTFSPNGVPFITEALYGPKYTSLN
NAVMFGPAVSESCFAPWEGQVTETCNSKWLKYKHGQAADCQGQVEVALEQQGMVFIRGEG
QGAYNPELKIKSFQRNLLLLHPQLLLMVDNIQLHLGSPTRSMSAFFHNTDMPFQITQVDG
VHGALIRHGNETSKMFWLDNTGSSEKATVGYRSYPRGYPYNGSNYVNVTMPLRYPSSRVA
YIFFGSGVDVQSFSVHGDSGALDIYLSTGDHTYTIYLFTDLVPTKPMAMVLMDQKKVVFE
RTAGTNEQPLEEVEEYVNVVEDNLQHVKPVFQQLERHILSRVLNSDSFHKTAERLLKSSD
QRKTPGTIEKMFSLSKKHGKGGKKASFSNSLPDIFAQIEVREKKERQRTMKRIYEEAPEE
ADGDSRAFIDYSDLRKGRKVGFVKGRKFKEVRVGTTAESDNMFNAPSYIRLFLILNIATF
FVLLAVLLTHFQRAQSLHTQRCLYCVLLIDSFVLLCLYSSCSQTQC
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttacacccgtggggcaccaacagtgttctttataagtgcactagtgtcccta
gctctggctggagccgaccccagtggaggcattccgttccttggagggaactacgaggga
actcaccccatgctgtacttcggccaggcagaggttgaggagctgcagcgggcggcggtg
gggacgcacaaggctttggcccgacagatccgggaggccggggaggccatactggagcga
ccggaggagtatctgcccccttggaaccctactgagtttagtgcccgctggaacgaagtc
tatgggaacaacttaggcctgctctctatgttctgcctgctgtacccgcaccgcgccggt
gcactggaagtagccaaggaatacatggagcgcatggctgtgcagcccaactggatggtg
aaagatgctccgtgggatgaggttcccatagctcactctctggttggctttgctacagca
tacgacttcctctatgagtatctcagtaaagttcagcaggagcgtttcctgcaggtgatt
gcgaatgcttcacgttacatgtatgagaaatcgtaccaccgcggctggggatttcagtac
ctccacaaccaccaacccaccaactgtgttgctcttctgactggcagcctcgtggtcatg
aaccaaggatacctccaggatgcgtacctctggacgaaacaggctctggccatcatggaa
aagtccatggtgcttctccgagatgtgactgatgggtctctgtatgagggtgtggcctat
ggaacttacaccactcgttcactctttcagtacatgtatctggtacagagacactttgat
atcggccacttcaatcatccctggctccacaaacacttcgcatttctctacaggacagtg
ttgcctggttttcagagaactgttgcaattgcagactccaactataactggttctatggg
ccagagagtcagttggtctttctggatcggtatgtcatgcgaaatggcagtgggaactgg
ctggctgaggtaatcagacagaatcgagttctggagggcccaggacaggcaggcaggggg
cagcgctggtgcacactgcacacagagttcctctggtatgatgccagtctgcaacccacc
ccacctcctgattatggtacatcacacctccattatttcgaagactggggagtggtgacc
tacggaagtgccctacctgctgggagaaaccgcacatttctgtcctttaagtcggggaag
cttggtggacgtgctattttcgacattgttcaccaaaacaaatacaaaaactggataaaa
gggtggcggaactttaatgcgggccatgagcacccggaccagaactcctttaccttctct
ccgaacggagtcccgtttatcacagaggcattgtatggtcccaaatacacctctctcaac
aatgcagtcatgttcgggcctgccgtgtctgagagctgctttgcaccatgggaaggccaa
gttacggagacttgtaactctaaatggcttaagtacaagcacggtcaagcagcagactgc
caaggtcaggtggaggtggctctggagcagcagggcatggtgtttattcgtggggagggt
caaggagcttacaaccctgagctgaaaattaagagttttcaaaggaacttactgctgctt
catcctcagttgctgctgatggtcgacaacattcagctgcatttaggcagcccgacacgc
agcatgagcgccttcttccacaacacagacatgccgtttcagataacccaagtcgatgga
gttcatggtgctctgatcagacacggaaatgaaacgtccaagatgttctggttggacaat
acaggcagcagtgaaaaggcaacagtgggatataggagctacccccgtggatacccctat
aatggttcaaactatgtgaatgtgactatgccactgaggtacccttccagcagagtggcc
tacatcttcttcggatccggagtggatgttcagagtttcagcgtgcatggagactcggga
gcactggacatctatctatccaccggggatcacacctacaccatctatctgttcacggat
ttggttcccaccaagcctatggccatggtgttgatggaccaaaagaaagtagtgtttgaa
aggacagcggggacaaatgagcagcccttggaggaagttgaggaatacgttaatgttgta
gaggacaatctgcagcatgtcaaaccagtctttcagcagctggagaggcacatcctttca
cgggttcttaactcggacagtttccacaaaactgctgagcgcctcctaaagtcctcggac
cagaggaagactccaggtactattgagaagatgttttccctttctaagaagcacgggaag
ggaggcaagaaggcaagcttttccaatagcctcccagacatctttgctcagattgaggtg
agggagaagaaggagaggcagaggacgatgaagcgcatctatgaggaggctccggaggag
gcagatggcgactcaagggcattcatcgattacagtgatttacgaaagggcagaaaagtg
ggatttgtaaaggggcggaaattcaaagaggtacgagtggggactacagcagagagtgac
aatatgtttaatgccccctcatacattcgccttttcctgattttgaatatagccactttc
tttgtgctgctggcggtgctgttgacgcacttccagagggcacagagtttgcatacgcag
cgttgcctctactgcgtcctcctcatagacagcttcgtcctgctctgtctgtactcctcc
tgctcgcagacacagtgctga
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