Sinocyclocheilus grahami (golden-line barbel): 107549945
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Entry
107549945 CDS
T04918
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1D-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107549945
04020 Calcium signaling pathway
107549945
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107549945
09153 Circulatory system
04260 Cardiac muscle contraction
107549945
04261 Adrenergic signaling in cardiomyocytes
107549945
04270 Vascular smooth muscle contraction
107549945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107549945
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107549945
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107549945
NCBI-ProteinID:
XP_016086610
LinkDB
All DBs
Position
Unknown
AA seq
2026 aa
AA seq
DB search
MYEENRKRNGYSNEEEEGGGEAEEEEEEEEEGGGGVEGNEEETDEWEENERPKMNRTETL
NSTTSSTGTQKKKSHHVKKQVQGSNQVQRAPRALFCLKLNNPIRRAALHLVEWKPFDIFI
LLAIFANCVALGVSKPFPEDDSNATNHDLEQVEYVFLIIFTIETFLKILAYGLVMHPSSY
IRNGWNLLDFVIVIVGLFSVVLETATHKSGETTSHTPGKPGGLDVKALRAFRVLRPLRLV
SGVPSLQIVLNSIMKAMVPLLHISLLVLFVIIIYAIIGLELFIGRMHHTCYFIGTDNYAD
DDPVPCAYAGHGRQCAANGSECRGKWDGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLY
WMNDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQM
EEDLCGYMDWITQAEDIDEFDEDGNRRVTLRDLADKKRGKFGWFSHSNETHASLPASETA
SENTENIDEEHTDCCAACCAHIMKIPCCRALRRWNRCIRRNCRTAVKSVTFYWLVLILVF
LNTALSASEHYNQPDWLTDILTGEDWNVVMYDGIMAYGGPVFPGMIVCLYYVILFICGNY
ILLNVFLAIAVDNLAGGDGDNKKNEETKEGEGDGEGEGEGENGEVKVDIDDEYEEEEEPE
EGDDEEGKAQLNVADFTPSKEKVLPIPEGSAFFCLSKTNPIRVGCHTLIHHHIFTNLILV
FIILSSISLAAEDPIRAHSFRNNVLGYADYAFTSIFTVEILLKMTVHGAFLHEGSFCRNW
FNLLDLLVVSVSLVSFFLHSSAISVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKT
IGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDEAKNTPEQCKGTFVVYKDGDVSHPMVKE
RIWINSDFNFDNVLMGMMALFTVSTFEGWPALLYKAIDANAENHGPIYNYRVEISIFFIV
YIIIIAFFMMNIFVGFVIITFREQGEAEFKNCELDKNQRQCVEYALKAQPLKLYIPKNPV
QYKFWSIINSTGFEYIMFVLILLNTVTLAVQHYDQSKFFSYVMDILNMVFTGLFTVEMII
KLMALRLRHYFIDAWNSFDALIVVGSVVDIVVTEFSSSEDSSRVSITFFRLFRVMRLVKL
LSKGEGIRTLLWTFVKSLQALPYVALLIAMIFFIYAVIGMQTFGKVAMQDHTQINRNNNF
QTFLQAVLLLFRCATGEAWQEIMLASLPGKRCDPESDYEPAEEFTCGSNFAIVYFISFFM
LCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKRIWSEYDPEAKGRIKHLDVVALL
RRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDGTVTFNATLFALVRTALKIKTEGNPDQE
NEELRIIIKKIWKRIKPKILDEVIPPPAEEEVTVGKFYATFLIQDYFRKFRKRKEKVGLE
DSENGNPSALQAGLRTLQDLGPEMRLAMNEDLEEEEEGLEEEQEEDDARYKDLGPEMRLA
MNEDLEEEEEGLEEEQEEDDARYKKIVHETEGLDDYSDCIYTVVPVSFRVHLCQAGLRTL
QDLGPEMRLAMNEDLEEEEEGLEEEQEEDDARYKNENGYAGHTEPSSKSRRSSLATTPSG
APVPVSGEGILNGGLGCRSSLSKTQNGNGALEHENFRRRDSMRSSFHYQHKNGVIDQLPR
RSSYYKYPRGDSRDRFSSPLSRREEGGEYPGEQRFYGKDEDSESVISRERHGHPEDSTMF
PGHRDMYDGHSMRHPVYGNHYGNSYGEGRRTARRRLLPATPTGRKASFNIQCLRRQGSSD
DLPIPGTYHQNSPPCRARLQGCGSYDSRCSSARSSTGSTASWANTGPRRGRLLYAPLILV
EEEGAGGAGSVGIWDKKAGAIGVPASVRHPSSGWYSGPSTGGGGQPYRAYTTLRVPTQLS
PHYSEKRGSADSLVEAILISEGLGLYAKDPKFVAFAKREIADACHMTIDEMESAASDLLS
RAGSGESQGFLNHTDMGPIYSDEEPIRSHEEEELADEIVRLQMPVT
NT seq
6081 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggagaaccgaaaaaggaatgggtactccaatgaggaagaggagggtggtggc
gaagcggaagaggaggaggaggaggaggaggagggaggtggaggagtagagggcaatgag
gaagaaacagacgagtgggaggagaatgaacggccgaagatgaaccgtacggaaacgctc
aactccaccaccagctccactggaacgcagaagaagaagagtcaccatgtgaagaagcag
gtccagggctccaaccaagtccaacgcgcgcccagagctcttttctgccttaaattaaac
aaccccatccgcagggccgcccttcaccttgtagagtggaaaccatttgatatctttatt
cttctggccatcttcgctaactgtgttgctctgggggtctccaagccttttcccgaagac
gactcgaacgccaccaaccatgaccttgaacaagttgaatatgtgtttttgatcatcttc
accatcgagacgtttctgaagatccttgcgtatggccttgtcatgcacccaagctcctac
atccgcaacggctggaatttactggactttgtcatcgtcattgtagggttgttcagtgtg
gtattagagactgctactcataaatctggtgaaacaacttcccacacgccggggaaaccg
ggaggtctggatgtcaaagctctccgagccttcagagtcttacgacccctcagactggtt
tcaggagtgcccagcctgcagattgtgttaaactccatcatgaaggcaatggttcccctg
ctgcacatctctctgcttgtcctctttgtcatcatcatctatgccatcatcggattggag
ctcttcattggacgaatgcatcacacctgctattttataggcacagataattatgcagat
gatgatccagtcccgtgtgcgtatgcgggtcacggtcgccagtgtgctgccaatggctcc
gagtgcaggggaaagtgggatggaccgaacggtggcatcactaactttgataacttcttc
tttgccatgttaacagtgttccagtgcatcacaatggaaggctggacagacgtcttgtac
tggatgaatgatgcaattggttttgagctgccatgggtttactttgtaagcctggtcatc
tttggatccttctttgttctcaaccttgtgttgggtgtgttgagcggagaattctctaag
gagagagagaaggcgaaagctcgcggagatttccagaagcttcgtgagaaacagcagatg
gaggaggatctgtgtggatatatggactggatcactcaggctgaggacattgatgagttt
gatgaagacgggaacagacgtgtgaccttgcgtgacctagctgataagaagagggggaaa
ttcggctggttcagccactcaaacgaaacccacgcaagtcttccagccagtgaaacggcc
tctgagaacactgaaaacatagatgaggaacacactgattgttgtgctgcttgctgcgct
cacattatgaagatcccgtgctgtcgtgccctgcgccgctggaaccgttgcattcgtaga
aactgtcgtacagcagtgaaatctgtgacgttctattggttagtgctgatcctagtcttc
ctcaacactgctctcagtgcctctgaacattataaccaaccagactggctcactgacatc
ttaacaggtgaagactggaatgtagtaatgtatgatggtatcatggcatatggaggcccg
gttttccctggaatgatcgtttgtctttactatgtgattttgttcatttgtggtaactat
atcctactgaacgtcttcttggccatcgctgtcgacaacttagcaggaggggatggagac
aataagaagaatgaagaaacaaaagagggagagggtgacggtgaaggtgaaggtgaagga
gagaacggagaggtgaaggtggacattgacgatgagtacgaggaagaggaggagcctgaa
gagggagatgatgaagaagggaaagctcagctcaatgttgctgacttcactccttctaaa
gagaaagttctaccaatcccagagggcagtgcgttcttctgcctcagcaagaccaaccca
ataagagtgggctgccataccctgatccaccaccacatcttcactaatctcatcctggtc
ttcatcattctcagcagcatttctctggctgcggaagatcctataagagctcactccttc
aggaacaatgtgttgggttatgctgattatgctttcacttctatattcactgtggagatc
ttactgaagatgacagtgcatggtgcattcctccatgagggttccttctgtagaaactgg
tttaatttgttggatcttttggtggtcagtgtgtctctggtctccttcttcttacattcg
agtgcaatctctgtagtgaagatcctaagggtgctcagagttctgaggcctcttcgagca
atcaacagagccaaaggactcaagcatgtggtacagtgtgtgtttgtggctataaagacc
atcgggaacatcatgatcgtcaccaccctacttcagttcatgtttgcctgcatcggtgtt
cagcttttcaagggtaaattttatcgttgcacagatgaagctaaaaacactccagaacag
tgcaagggcacatttgttgtgtataaagacggagatgtgagtcatccaatggtgaaagag
aggatctggatcaacagcgacttcaacttcgataatgtactgatgggaatgatggccctg
tttacagtctccacttttgagggttggccagcgctgctctacaaagccattgatgccaat
gcagagaatcatggccccatttacaactaccgtgtggagatctctatattcttcatcgtc
tacatcatcatcatcgccttcttcatgatgaacatctttgtgggttttgtcatcatcact
tttcgtgaacaaggagaggctgagttcaagaactgtgagctggacaaaaatcagagacag
tgtgtggaatacgccctaaaggcccagccgctgaagctgtacatccccaaaaacccagtg
cagtacaagttctggtctataatcaactccacagggtttgagtacatcatgtttgtgctg
attctcctcaacactgttactctggctgtgcagcactatgaccagtcaaaattttttagt
tacgtgatggacatcctcaatatggttttcaccggccttttcactgtggagatgatcatt
aaactgatggctctcagactcaggcattactttatcgacgcatggaattcctttgatgct
ctgattgtggtgggaagtgtggtggacattgtggttacagagttcagcagctcagaggac
agctctcgtgtatccataactttcttccgtctgtttcgtgtaatgcgattggttaagttg
ctcagcaagggagagggcattcgtaccctgctctggacttttgtgaaatcactccaggcc
ctgccgtatgttgctcttctgatcgctatgatcttcttcatctatgctgtaattggaatg
cagacatttggaaaggtcgccatgcaggaccacacacaaatcaacaggaacaacaatttt
cagacttttctgcaggctgtgctgctacttttcaggtgtgcaacgggtgaagcgtggcag
gagatcatgttggccagtcttccaggaaagcgctgtgacccagaatcagactatgagccc
gcggaagaattcacatgcggcagcaactttgctattgtctactttatcagtttctttatg
ctctgcgccttcctgattattaatctgtttgttgccgtcattatggacaattttgactat
ctgacccgtgattggtcaattctcggaccacatcacctggatgagtttaaaagaatctgg
tcagagtacgaccctgaagccaagggtcgtataaagcatttggatgtagtggctttgctc
aggagaatccagccgccacttggatttgggaagctctgtcctcatcgtgtggcctgcaag
aggctggttgccatgaacatgcccctgaacagtgatggtacggtgaccttcaacgccacc
ctgttcgccctggtcagaactgctctgaaaattaaaactgaggggaaccctgatcaagag
aacgaagagttgagaatcatcattaagaagatctggaagagaataaaacccaaaatattg
gatgaggttattccaccccctgctgaggaagaagtgactgtgggtaaattctatgccaca
ttcttgatccaggactattttaggaagttccggaaaaggaaagagaaagtgggtctggaa
gattcagagaatggtaacccttccgctctacaggcggggctgcgaactctgcaggatctt
gggccagaaatgagactggccatgaacgaagatctggaggaggaagaggagggtctggag
gaggagcaagaggaggatgatgctcgttataaggatcttgggccagaaatgagactggcc
atgaacgaagatctggaggaggaagaggagggtctggaggaggagcaagaggaggatgat
gctcgttataagaaaatagtccatgagacagaaggattagatgattattcagactgcata
tatactgtggtgcctgtctctttccgcgtgcatctgtgtcaggcggggctgcgaactctg
caggatcttgggccagaaatgagactggccatgaacgaagatctggaggaggaagaggag
ggtctggaggaggagcaagaggaggatgatgctcgttataagaacgaaaatggctatgca
ggccacactgagccctcaagcaaaagccggcgctcctctttggccactacacccagcggt
gctcctgttcctgtctcaggagaaggcatcttgaacgggggactgggatgtaggagctcc
ttatcaaaaacacagaacgggaacggtgctttggaacacgagaatttcagaagaagagac
agcatgcgttcctcctttcattaccaacacaagaatggtgtgattgaccagctgcctagg
agatcatcatactacaaatacccaaggggggactccagggacagattctcctctccgcta
tctcggcgagaggaaggcggtgagtaccctggagagcagcgcttctatggaaaagatgag
gacagcgagagtgtcatctctagagaaaggcatggtcatccagaggacagcacaatgttc
ccgggacatagagacatgtatgatggacactctatgagacaccctgtctacggtaatcat
tatggaaacagttatggtgaaggcaggaggacagcacggagacgcctgctgcctgcaacg
cctactgggagaaaggcttcgtttaacatacagtgtttaagaaggcaaggtagcagtgat
gatctgcccatcccaggaacgtaccatcagaactccccaccctgcagagcgcgtttacag
ggatgcggcagctacgattctcgttgcagcagcgctagatcatccacgggttcaacagca
tcctgggcaaacaccggccctcgacggggtcgtctcctttacgctccccttatcctggta
gaggaggagggagcaggaggggctggaagtgtaggcatctgggacaaaaaggccggtgcc
atcggagtgcctgcgtcggttcggcatcccagttcgggatggtactcgggaccctctacg
ggtggaggggggcagccatatcgagcctacaccaccctcagagtccccacccaactcagt
cctcactacagcgagaagagaggcagcgctgacagtctggtagaagcgatcttgatctct
gagggtttgggattgtatgccaaggacccaaaatttgtagcctttgccaagcgtgagatt
gcagatgcctgtcacatgaccatagatgagatggaaagtgctgcaagtgatctcctgagt
cgtgcgggctcaggggagagtcaaggcttcctgaaccacacagacatggggcccatatac
agtgacgaggagcccatcaggagccacgaggaagaggaactggctgatgaaattgtgaga
ttgcagatgcctgtcacatga
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integrated database retrieval system
