Sinocyclocheilus grahami (golden-line barbel): 107550115
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Entry
107550115 CDS
T04918
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1F-like
KO
K04853
voltage-dependent calcium channel L type alpha-1F
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107550115
04020 Calcium signaling pathway
107550115
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107550115
09153 Circulatory system
04260 Cardiac muscle contraction
107550115
04261 Adrenergic signaling in cardiomyocytes
107550115
04270 Vascular smooth muscle contraction
107550115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107550115
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107550115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CAC1F_C
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107550115
NCBI-ProteinID:
XP_016086830
LinkDB
All DBs
Position
Unknown
AA seq
1708 aa
AA seq
DB search
MLCVCVFDPFSFLCVSCSECRGKWEGPNGGITNFDNFFFAMLTVFQCITMEGWTDVLYWM
NDAIGFELPWVYFVSLVIFGSFFVLNLVLGVLSGEFSKEREKAKARGDFQKLREKQQMEE
DLCGYMDWITQAEDIDEFDEDGNRLHFYCRALRRWNRYIRRNCRTAVKSVTFYWLVLILV
FLNTALSASEHYNQPDWLTDVQDIANKVLLSLFTVEMLLKMYSLGLQAYFVAFFNRFDCF
VVCGGILETVLVEMEIMPPLGISVLRCVRLLRIFKVTRHWTALSNLVASLLNSMKSIASL
LLLLFLFLIIFALLGMQLFGGKFNFDETQTKRSTFDSFPQALLTCFQILTGEDWNVVMYD
GIMAYGGPVFPGMIVCLYFVILFICGNYILLNVFLAIAVDNLAGGDGDNKKNEEKKEGPG
EGESERENKEVKVDMDDEYEEEEEPEEGDDGEEGITQLNVADFAPPKEKVLPIPEGSAFF
CLSKTNPIRVGCHTVIHHHIFTNLILVFIILSSISLAAEDPIRAHSFRNNVLGYADYAFT
SIFTVEILLKMTVHGAFLHQGSFCRNWFNLLDLLVVTVSLVSFFLHSSAISVVKILRVLR
VLRPLRAINRAKGLKHVVQCVFVAIRTIGNIMIVTTLLQFMFACIGVQLFKGKFYRCTDE
AKNTPEQCKGTFVVYKDGDVSHPMVRERIWINSEFNFDNVLMGMMALFTVSTFEGWPALL
YKAIDANAENHGPIYNYRVEISIFFIVYIIIIAFFMMNIFVGFVIITFREQGEAEFKNCE
LDKNQRQCVEYALKAQPLKLYIPKNPVQYKFWSIINSTGFEYIMFVLILLNTVTLAVQHY
DQSKFFSYVMDILNMVFTGLFTVEMIIKLMALRLRHYFIDAWNSFDALIVVGSVVDIVVT
EFSSSEDSSRVSITFFRLFRVMRLVKLLSKGEGIRTLLWTFVKSLQALPYVALLIAMIFF
IYAVIGMQTFGKIAMHDHTQINRNNNFQTFPQAVLLLFRCATGEAWQEIMLASLPGKRCD
PESDFEPGEEFSCGSNIAIVYFISFFMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHL
DEFKRIWSEYDPEAKGRIKHLDVVALLRRIQPPLGFGKLCPHRVACKRLVAMNMPLNSDG
TVTFNATLFALVRTALKIKTEGNPDQENEDLRIIIKKIWKRTKPKILDEVIPPPAEEEVT
VGKFYATFLIQDYFRKFRKRKEIVGLGDSENGNPLALQAGLRTLQDLGPEMRLAMNEDLE
EEEEGLEEEQVEDDPCYKNENGYAGHTEPSSKSRRSSLATTPSGAPVPVSGDGILNGGLG
RRSSLAKTPNGNGTLEHENFRRRDSMRSSFHYQHKNGVTDQLPRRPSYYKYPRRDSRDRF
SSPLSRREEDGEYPGEQRFYGKDEDSESVISRERHSYPEDSTMYPVHRDMCDGHSMRHPV
YGKHYGNSYGEGRRTARRRLLPATPTGRKASFNIQCLRRQGSNDDLPIPGTYHQNSPPCR
VRSQGYGSYDSRQSSARSSTGSTASHYSTASWANTGPRRGRLLYAPLILVEEEEGAGGAS
VGIWDKQASAVGVPASVRHPSSGWYSGPSTGGGGQPYRAYTTLRVPTQLSPQYSEKRGSA
DSLVEAVLISEGLGLYAKDPKFVAFAKREIADACHMTIDEMESAASDLLSRVGPGESQGF
SAIYSDEEPIRSHEEEELADEMTCVTSF
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgtgtatgtgtgtttgaccctttctcttttctttgtgtctcttgttcagagtgc
aggggaaagtgggagggaccaaacggcggcatcactaactttgataacttcttctttgcc
atgttaactgtgttccagtgcatcacaatggagggctggacagacgtcttgtactggatg
aatgatgcaattggttttgagctgccgtgggtttactttgtcagtctggtcatctttgga
tccttctttgtcctcaaccttgtgttgggtgtgttgagcggagaattctctaaggagaga
gagaaggcgaaagctcgcggtgatttccagaagcttcgtgagaaacagcagatggaggag
gatctgtgtggatatatggactggatcactcaggctgaggacattgatgagtttgatgag
gatgggaacagactacatttctattgtcgtgccctgcgccgctggaaccgttacatccgt
agaaactgtcgtacagcagtgaaatctgtgacattctattggttggtcctgatcctggtc
ttcctcaacacggctctcagtgcctcagaacattataaccaaccagactggctcacagac
gttcaggatattgccaataaggttcttctctcgttgttcacagtggagatgttgttgaaa
atgtacagtctggggttgcaggcatattttgtggcatttttcaaccgttttgattgtttt
gtcgtgtgcggtgggattctggagacagttctagtggagatggagatcatgccacctcta
ggcatctcagtgttgcgctgcgtccgcctgcttcggatcttcaaagtcacacgccattgg
acggctttgtccaatctggtggcctcgctactgaattcaatgaagtccattgcctccctg
ctgctgttgctcttcctcttcctcatcatctttgctctgcttggcatgcagttatttgga
gggaagttcaactttgacgagacgcaaaccaagagaagtacctttgattcctttcctcag
gccctgctcacctgctttcagatattaacaggtgaagactggaatgtagtaatgtatgat
ggtatcatggcatacggcggcccggttttccctggaatgatcgtctgtctttattttgtg
attttgttcatttgtggtaattatatcctgctgaacgtcttcttggccattgctgtcgac
aacttagcaggaggcgatggagacaataagaaaaatgaagaaaaaaaagagggaccgggt
gaaggtgaaagtgaaagagagaacaaagaggtgaaggtggacatggatgatgagtatgag
gaagaggaggagcctgaagagggagatgatggagaagaagggataactcagctcaatgtt
gctgacttcgctcctcctaaagagaaagttctaccaatcccagagggcagcgcattcttc
tgcctcagcaagaccaacccaataagagtgggctgccataccgtgatccatcaccacatc
ttcactaatctcatcctggtcttcatcattctcagcagcatttctctggctgcggaggac
cctatcagagctcactccttcaggaacaatgtgttgggttatgctgattatgctttcact
tctatattcactgtggagatcttactgaagatgacagtgcatggcgcattcctccatcag
ggttccttttgtagaaactggtttaatttgttggatcttttggtggtcactgtgtctctg
gtctccttcttcttacattcgagtgccatctctgtagtgaagatcctaagggtgctcaga
gttctgaggcctcttcgagcgatcaacagagccaaaggacttaagcatgtggtacagtgt
gtgtttgtggctataaggactatcgggaacatcatgatcgtcaccactctacttcagttc
atgtttgcgtgcatcggtgttcagcttttcaagggaaaattttatcgttgcacagatgaa
gctaaaaacactccagaacagtgcaagggcacatttgtggtgtataaagatggagatgtg
agtcatccaatggtgagagagaggatctggatcaacagtgaattcaacttcgataatgta
ctgatgggaatgatggccctgtttacagtctccacttttgagggttggccagcgctgctc
tacaaagccattgatgccaatgcagaaaatcacggccccatttacaactaccgtgtggag
atctctatattcttcatcgtctacatcatcatcatcgccttcttcatgatgaacatcttc
gtgggttttgtcatcatcacttttcgtgagcaaggagaggctgagttcaagaactgtgag
ctggacaaaaatcagagacagtgtgtggaatacgccctaaaggcccagccgctgaagctg
tacatccccaaaaacccagtgcagtacaagttctggtctataatcaactccacagggttt
gagtacatcatgtttgtgctgattctcctcaacactgttactctcgctgtgcagcactat
gaccagtcaaaattttttagttatgtgatggacatcctcaatatggttttcaccggcctt
ttcactgtggagatgattattaaactgatggctctcagactcaggcattactttatcgac
gcatggaattcctttgatgctctgattgtggtgggaagtgtggtggacattgtggttaca
gagttcagtagctcagaggacagctctcgtgtgtccattactttcttccgcctgtttcgt
gtaatgcgattggttaagctgctcagcaagggagagggcattcgtaccctgctctggact
tttgtgaaatcactccaggccctgccgtatgttgctcttctgatcgctatgatcttcttc
atctatgctgtaattggaatgcagaccttcggaaagatcgccatgcatgaccacacacaa
attaacaggaacaacaattttcagacttttccgcaggctgtgctgcttcttttcaggtgt
gcaacaggtgaagcgtggcaggagatcatgttggccagtcttccaggaaagcgctgtgac
ccagagtcagactttgaacccggggaagaattctcctgcggcagcaacattgccattgtc
tactttatcagtttctttatgctctgtgccttcttgattattaatctgtttgttgctgtc
attatggacaattttgactatctgacccgtgattggtcaattctcgggccacatcacctg
gatgagtttaaaagaatctggtcagagtatgaccctgaagccaagggtcgtataaaacat
ttggatgtagtggctttgctcaggagaatccagccgccacttggatttggaaagctctgc
cctcaccgtgtggcctgcaagaggctggttgccatgaatatgcccctgaacagtgatggt
acggtgaccttcaatgccaccctgtttgccctggtcagaactgctctgaaaattaaaact
gaggggaaccctgatcaagagaacgaagatttgagaatcatcattaagaagatttggaag
agaacaaaacccaaaatattggatgaggttattccaccccctgctgaggaggaagtgact
gtgggtaaattctatgccacattcttgatccaggactatttcaggaagttccggaaaagg
aaagagatagtgggtctgggagattcagagaatggtaaccctttagctctacaggcgggg
ctgcgaactctgcaggacctggggccagaaatgagactggccatgaacgaagatctggag
gaggaagaggagggcctggaggaggagcaagtggaagatgatccatgttataagaacgaa
aatggctatgcaggccacactgagccctcaagcaaaagccggcgctcctctttggccact
actcccagcggtgctccggttcctgtctcaggagatggcatcctaaatgggggactggga
cgtaggagctccttagcaaaaacaccaaatgggaatggcactctggagcacgagaacttc
agaagaagagacagcatgcgttcctcctttcattaccaacacaagaatggcgtgactgac
cagctgcccaggagaccatcatattacaaatacccaaggagagactccagggacagattc
tcttctccactatctcggagagaggaagatggtgagtaccctggagagcagcgcttctat
ggaaaagatgaggacagcgagagcgtcatctctagagaaaggcacagttatccagaggac
agcacaatgtacccggtacatagagacatgtgtgatggacactctatgaggcaccctgtc
tacggtaaacattatggaaacagttatggtgaaggcaggaggacggcacggagacgcctg
ctgccagcaacacctactgggagaaaggcttcatttaacatacagtgtttaagaaggcaa
ggtagcaacgatgatctgcccatcccaggaacataccatcagaactccccaccctgcaga
gtgcgttcacagggatacggcagctacgattctcgtcaaagcagcgctagatcatccacg
ggttcaacagccagtcattattcaacagcatcctgggcaaacaccggccctcgacggggt
cgtctcctctatgctcccctcatcctggtagaggaggaggagggagcaggaggggcatct
gtgggcatctgggacaaacaggccagtgccgtcggagtgcctgcgtcggttcggcatccc
agttcgggatggtactcgggaccctctacgggtggaggagggcagccgtatagagcctac
actaccctcagagtccccacccaactcagtcctcaatacagcgagaagagaggcagcgct
gacagtctggtggaagcggtcttgatctctgagggtttggggttgtatgccaaggaccca
aaatttgtagcctttgccaagcgtgagattgcagatgcctgtcacatgaccatagatgag
atggaaagtgctgcaagtgatctcttgagtcgtgtgggccctggggagagccaaggcttc
tcagccatatacagtgatgaggagccgataaggagccacgaggaagaggaattggctgat
gagatgacttgtgttacatctttttga
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integrated database retrieval system
