KEGG   Sinocyclocheilus grahami (golden-line barbel): 107556790
Entry
107556790         CDS       T04918                                 
Name
(RefSeq) lysine-specific demethylase 2A-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107556790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107556790
   04121 Ubiquitin system [BR:sgh04121]
    107556790
   03036 Chromosome and associated proteins [BR:sgh03036]
    107556790
Enzymes [BR:sgh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107556790
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107556790
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107556790
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107556790
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107556790
SSDB
Motif
Pfam: F-box-like JHD F-box PHD_4 JmjC Cupin_8 LRR_6 LRR_4 Rubredoxin Cupin_1
Other DBs
NCBI-GeneID: 107556790
NCBI-ProteinID: XP_016095481
LinkDB
Position
Unknown
AA seq 1192 aa
MENGQENLTLVDGGMLLMRRRGRKRKSQQRDEDVTLKRSGTRRRYQDDGLSDEEIDGKRT
FDLEEKLHSKRFSSDRVKRMEGKDLTYEYIQRCGLRDPIIFERPDGLGIKMPDPDFSVND
VKSLVGSRRMIDVMDVSTQKGTEMSMMQWNSYYATPPSQREKLYNVISLEFSHTKLESYV
KRPTTVDMIDWVDNMWPRHLKERQRDATNSITDMQYPKVQKYCLMSVQGCYTDFHIDFGG
TSVWYHILRGCKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKATDCQRVELKQGYTFI
IPSGWVHAVYTPVDTLVFGGNFLHSFNIPMQLYISNIEDRTRVPAKFRYPFFHEMCWYVL
ERYLYSVTNTSHLIPEFQKHSLGIDLRREDSGCEELNGHAEEERDDNDAPSPPNAPGVKL
HLTPFELKGLWHLVENLESLPSHKKCVPSGIHNAAALLHDIRALLKEHADDIPELSYTGK
PIVRWPKRTSGEGVVNKDLPSCWECPKCIMGKETDSESSGSGDDITAQDGSGGRGGEGGA
WHGVGRPPSSLSHGSLQKRAAAPEQRLRKRLQLEGGKTHKRKSSSLDPRVAKIYRRHGME
HDDDSGSDDDSCKMSSVRGRVSSSRRGYGAGRRGVWRGSSHRGSRGRGSLATRSLKMRRG
LGARAERGGRVRLRGGSHMRRRRYETEDDDDDDEDDDDDEEDDDEDDSDEERHLGRSDKE
HRSRRRRRRGDDYDDDEDDEDDDEEDSEEQDFEGEDDEMEDLDGGEEDDEDGGNQSDSDP
DPPVLLVSDLNDDLLNDSYLTVTLQRPPKAKRDPGSIVPKLEAAMSPRTPRGPGFNQRKT
LPRTRLRNSTSTPAGNGVSQSKSVHTSGRPTRRSSNQGGRERDTASPSSMSSRSSVSPPP
PPPAIATSPPSLLSHPSFCDVGNERGCEKDIWMSVFRYLGRTDLAVCMRVCKAWYKWCCD
KRLWTQIDLSRCRALSPQALSAVIKRQPVTLDLSWTPVSKKQIAWLIHHLPSLKDLIMSG
CSSLCVSALSSQSCPGLRTLDLSWTVGVKDSQIKDLIVQPGSESRSRLRGLLTLSLAGLD
VSDSTLKMIVRHMPSLRRLDLSHCQGLTDQSINLLTATGCNTRNTLRQLNLSGSNKLTDA
CLSYMKRLSALALLDLRGCRNVTRRGCDNFISDLSHCTVFCLTEDKLIQRIS
NT seq 3579 nt   +upstreamnt  +downstreamnt
atggagaatgggcaggagaaccttacgcttgttgatggaggaatgttgttgatgagacgc
agaggcaggaagaggaaaagccagcagagggatgaagatgtgacactgaagcggtctggc
acacggcggcgttaccaagacgatggtctttccgatgaagagattgatggaaagaggact
ttcgatctggaggagaagctccacagcaaacgcttcagctcagaccgagtcaagcgcatg
gagggcaaagacctcacatatgagtacattcagagatgtgggcttcgggaccccatcatc
tttgagagacctgatggacttggcattaaaatgccagatccagacttcagtgttaatgat
gtgaagtcgttagtcggaagtcggcgtatgattgacgtgatggatgtgtctactcagaag
gggacggagatgtcaatgatgcaatggaatagctattatgcgactcctccctctcagaga
gagaagctttataatgttatcagccttgaatttagccacactaaactagagagctatgtc
aaaagacctaccacggtggacatgattgactgggtggacaacatgtggccaagacactta
aaggaaagacaaagagatgccacaaactctatcactgacatgcaataccccaaagtgcag
aagtactgcctaatgagcgtgcagggctgttacacagatttccacatagactttggaggc
acatctgtgtggtaccacatactgcggggctgcaaggtgttttggttaatcccgcccacg
ccacaaaacctggagctttatgagaactgggtgttgtcagggaaacaaggcgacatcttc
cttggtgacaaggccactgattgccagagggttgagctcaagcagggctacacgttcatt
attccatcaggttgggtccatgcggtgtacaccccagtagacacacttgtgtttggtggg
aactttctacatagttttaacatccccatgcaactatacatctccaacattgaggacagg
acacgggtgccagctaagttccggtatccattctttcatgagatgtgctggtatgtgttg
gagcgttatctgtacagcgtgaccaacacctcccacctcatccctgagtttcagaaacac
tctctgggaattgacttgaggcgggaagactcaggttgtgaggaactaaatggccatgct
gaagaggaaagggatgataacgatgctccatctccacctaatgcaccaggggtgaagcta
cacttgactccttttgagctgaaggggctgtggcacctggtggagaacttggagtcgctg
ccgtcacataagaagtgcgtgccttcaggaatacacaatgctgctgccctgctacatgac
atacgggcattattgaaagaacatgctgatgacatccctgaactctcttacactggaaaa
cccattgtcagatggccaaagaggacatctggtgagggagtggtaaacaaagacctaccg
agctgctgggagtgtcctaaatgtattatgggcaaagagacagattctgagtcgtcaggc
agcggtgatgacatcacggcacaggatgggtcaggggggcgagggggcgagggcggggca
tggcacggggtcgggcggcccccctcttctctctctcacgggtcgctccagaaacgggcc
gcagcccctgagcagcggctcaggaagcggctacaattggaaggtggtaaaacacataaa
cgcaagtcttcatctcttgatcctcgcgtggctaagatctatcggcgacatgggatggaa
cacgatgatgattcaggcagcgatgacgatagttgcaagatgtcatcagtccggggcagg
gtctcttcatcccgccgaggttatggagctggtaggcgaggtgtttggagaggctcctcg
catcgagggagtcgagggagaggcagcttggcaacaagatcgctgaaaatgaggagggga
ctcggagcaagagcggagagagggggtcgggttaggttaagaggaggatcccacatgagg
cgacggcgctatgaaacagaagacgatgatgacgatgatgaagatgacgatgatgatgag
gaagatgatgatgaggatgacagtgatgaagagagacatcttggccggtcagataaggag
catcgttcaaggagacgtaggcggagaggtgatgactatgatgatgatgaagacgacgag
gatgatgatgaggaagacagtgaggaacaggactttgaaggagaggatgatgagatggaa
gacttggatggaggagaggaagatgatgaggatggagggaaccaatcagactctgatcct
gacccacccgtcttactagtctcagacttgaatgatgacctgctgaatgattcctacctg
actgtgaccctccagcgtcctccaaaggccaaacgtgaccccggttccattgtacccaaa
ctggaggcggctatgtctccccgaacacctaggggtcctggcttcaaccagcgtaaaacg
ctacccaggacccgtctcaggaacagcacctcaacaccagccggaaatggtgtctctcaa
tccaaaagcgtccacacgtccggccgccccacaaggcggagctccaaccagggtggtcga
gagagagacacagcgtcaccgtcctctatgtcttctcgttcctctgtttctccgccacct
cctcctccagccatcgccacttctcctccttccctcctctctcatccctcattctgtgat
gtaggaaacgagcgtggctgtgaaaaggacatttggatgtcagtgttccgttacttgggt
cggactgatttggctgtgtgtatgagagtctgcaaggcttggtacaagtggtgttgtgat
aagcgcttgtggacacagatagatctgagtcgatgtcgggcactcagtcctcaggctctg
tcagccgtcataaaacgacaacctgtgacacttgatctctcatggacaccagtatcaaag
aaacagattgcctggctcattcatcacctcccaagtttgaaagatctaataatgtcaggt
tgctcctcattatgtgtgtcagcgttaagttcacagagctgtccgggtttgcgaacactt
gacctgagctggaccgtgggtgtcaaagattcacaaataaaagacctcattgtgcagcca
ggcagtgaaagtcgcagtcggctgagaggtttgctcactctgagcttggctggtttggat
gtgagcgactccaccttgaagatgatcgttagacatatgccttcactgcgccggttagat
ttgtcccactgccagggactcacagaccagtccatcaacctgctcaccgctactggctgc
aacactcgcaacacactcagacagcttaatctttcaggtagtaataagttgacagatgct
tgtctgtcctatatgaagcgattatcagctctggctctgttggatctgcggggctgtagg
aacgtgactcgacgcggctgtgataacttcatctctgacctgtcccactgcaccgtattc
tgtctgaccgaggacaaactcattcagagaatatcataa

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