Sinocyclocheilus grahami (golden-line barbel): 107556836
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Entry
107556836 CDS
T04918
Name
(RefSeq) short transient receptor potential channel 3
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107556836
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
107556836
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
YVC1_C
Motif
Other DBs
NCBI-GeneID:
107556836
NCBI-ProteinID:
XP_016095553
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MSMKGRGSKYEKRVSFSEDEDEQCWKEENGGVDAHHLKSVKTVSDSSGYYRYNMKSSDTF
PHRRMTLPREKGRRQAVRGPAFMFNTRGSSLTAEEERFLDAAEYGNIPVVRKMLEESPTL
NVNCVDYMGQNGLQLAVGNEHLEVTELLLQRDNLARVGDALLLAISKGYMRIVEALLAHP
SFAGGERLTRSPCELQDDDFYSYDEDGTRFSPDITPIILAAHCQKYEVVHMLLMKGARIE
RPHDYFCKCADCTEKQRKDSFSHSRSRINAYRGLASPAYLSLSSEDPVLTALELSNELTK
LANIEKEFKDKKNRNKETSQHNGFFLNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGD
ISAELEEGQHHRSLLSRVKLAIKYEVKKTDIKLCTLIRLELRQAVEEAHACNLRGRHLRN
LFKGLSPLFGFPPSHTHLLTAEDQMVLAVALGQLFINDRRERAATGCRCCTYDDRGEDMH
SLVNYNNVCDASLGISTVQAQLDRFVAHPNCQQQLLTIWYENLSGLREQTTAVKCLVVLV
VALGLPLLAVGYWFAPCSKLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRFDGITTLP
NVTVTDYPLQIFRVKTTQFTWTEILIMVWVAGMMWSECKELWTEGPREYVMQLWNVLDFG
MLSIFIAAFTARFFAFLQAMKAQKYVDEKIHAPDLSMVTLPPDIKYFTYARDKWLPSDPQ
LISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGM
FILYSYYLGAKVNPAFTTVEESFKTLFWSIFGLSEVSSVVLKYDHKFIENIGYVLYGIYN
VTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTLPPPFSIVPSPKS
FYLCIKRLINLLRCRRRRLKKDVELGMDNSKSRLNLFTQSSMRMPDSHSFNSILNQPTRY
QQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEEKSQATEELSLLIQK
LSDKLNPSVHPHRANEG
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaaaggcagaggatccaaatacgagaaaagagtgtcgttttctgaggatgaa
gatgagcagtgctggaaagaggagaacggcggtgtggacgcacatcacctgaaatccgtc
aagacggtcagcgattcatctggatattaccggtacaacatgaaatcttcggatacgttc
ccccatcgcaggatgaccctaccacgagaaaagggccgacgacaggcggttcgcggaccg
gcgttcatgttcaacacccgtggcagcagcctcacggcggaggaagaacgctttttggac
gcggcggagtacggcaacatcccggtggtccgtaaaatgctggaagaatcacccacactc
aacgtgaactgtgtcgactatatgggacagaacgggctacagctggccgtcggcaacgaa
cacctggaggtcaccgagctgctcctgcagagagacaacctggcccgtgtcggggatgcg
cttctgctggcgatttccaaaggttacatgcgtattgtggaggccctgctggcacatccg
tcctttgcgggcggcgaacgactcacccgcagcccctgcgagttgcaagacgacgacttt
tactcgtacgacgaggacggcacacggttctcacccgatatcacgcctatcatcctggcc
gcccactgccagaaatacgaggtcgtgcacatgctcctgatgaagggcgccaggatcgag
cggcctcacgactacttctgcaaatgcgctgactgcacggagaagcagaggaaggactcg
ttcagccactcgcggtccaggataaatgcgtaccgtggactggccagtccggcttatctc
tctctgtccagcgaagaccccgtactgaccgcgctagagctgagcaatgagctcaccaaa
ctcgccaacatcgaaaaagaatttaaggataaaaagaaccgtaataaagagacatcgcag
cacaatggcttctttctgaatgactacaggaagctatctatgcagtgtaaagactttgta
gttggcgttttggatctgtgcagggacacggaggaggtggaggccatcttgaatggagat
atatccgccgagctcgaagaaggccagcatcatcgctccctgctcagtcgtgtcaaactg
gccattaaatacgaggttaagaagacagatataaagctgtgcaccctgatcagattggag
cttcgccaggctgttgaggaagctcatgcatgtaacctgagaggaagacacctcaggaac
cttttcaagggtctgtcaccgctgtttggattccctccaagccacactcatttactcacc
gcagaggatcagatggttctcgctgtagctctagggcagctctttattaatgacaggaga
gaaagggctgccacgggctgcagatgctgcacttatgatgatcgtggagaagacatgcac
agtttagtgaattacaataatgtctgtgatgcttctctggggatttcaactgttcaggct
cagttagacagatttgtggctcatcctaactgccagcagcagttgctgacgatctggtat
gagaatctgtctggtcttcgggagcaaaccactgcagtcaagtgtctggtggttttggtg
gtggcgctgggactccctctgctagctgtggggtattggtttgccccgtgcagtaagctt
ggtaaaatactacgcagtccttttatgaagtttgttgctcatgcggcctcctttatcatc
ttcctgtgtctgctggtgttcaatgcgtccgatcggtttgatggcatcaccacccttccc
aacgtcaccgtcaccgactacccactccagatcttcagagtcaagaccacacaattcacc
tggacagaaatactgatcatggtctgggtagcaggaatgatgtggtcggagtgtaaggag
ctctggacggagggtccgagggaatatgtcatgcagctctggaatgtgctggatttcggc
atgctctccatcttcattgcggcattcaccgcccgttttttcgccttcctgcaggccatg
aaagcccagaagtatgtggatgagaagatccatgctccagacctctcaatggtcacgctg
ccgccggacatcaaatatttcacatacgcgagagacaagtggcttccatcggatcctcag
ctgatctctgagggtctgtacgccattgctgtggtcctgagcttctctcgcatcgcctac
atcctgccggctaacgagagcttcgggccgctgcagatctcactgggacgaacagtgaag
gacatcttcaagttcatggtcctcttcatcatggtcttcctcgcattcatgattggcatg
ttcatcctctactcctactacctgggggcaaaggttaaccccgccttcaccacggttgag
gaaagctttaaaactctcttttggtccatattcggcctgtctgaggtgtcttctgtggtg
ttgaaatatgatcataaatttatcgaaaacatcggctacgtgctgtacgggatctacaat
gttaccatggtggtggttctgctcaacatgcttattgccatgataaacagctcataccag
gaaatagaggatgatgcagatgtggagtggaagtttgctcggtctaaactctggctctca
tattttgacaacggcaagactctcccgcctccattcagcatcgtccccagtccgaagtcc
ttctatctgtgtatcaagagactgatcaacctgctccggtgtcgccggcgccgcctaaaa
aaagacgtggagctgggcatggacaactcgaagtccaggctgaacctcttcacccagtcg
agcatgaggatgccggactctcacagcttcaacagcatcctaaatcaacccacacgctat
cagcaaattatgaagcgtctcatcaaacgctatgtactgaaagcacaagtggacaaagaa
aatgatgaagtgaatgaaggggagctgaaggagatcaagcaggatatttccagtctgcga
tatgaactgctagaggagaaatctcaggccacagaagagctctcactcctcatacagaaa
ctcagtgacaaactcaacccttctgtccatccgcacagagccaatgaagggtga
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integrated database retrieval system
