Sinocyclocheilus grahami (golden-line barbel): 107557350
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Entry
107557350 CDS
T04918
Name
(RefSeq) interferon regulatory factor 3-like isoform X1
KO
K05411
interferon regulatory factor 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh04623
Cytosolic DNA-sensing pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107557350
04621 NOD-like receptor signaling pathway
107557350
04622 RIG-I-like receptor signaling pathway
107557350
04623 Cytosolic DNA-sensing pathway
107557350
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107557350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107557350
04131 Membrane trafficking [BR:
sgh04131
]
107557350
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107557350
Membrane trafficking [BR:
sgh04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107557350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
107557350
NCBI-ProteinID:
XP_016096221
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
MTSKWEIETDMDFPSNVLHLIVKHNIGKKFSIKGALTDKPVSSSWHLKSSLKTPREATGL
ESDCIMAQPKPLFVPWLYEQIQSGSYPGVCWTNKEQRQFSIPWKHALRQDSNNVDVLIFK
AWAQTSVAGDGRINGDPSVWKRNFRSALRAKGFKIIIDSKNDAANPHKVYQFPSEPHSAA
SGSEGSQETDFSPELYVEESDMFPTHPPQGLEQDFTGLNLQESPSRVHEVWNPDQLYLGF
EEPVLYQETSPCPESQYTEIHYQIVNTHGQFSSAEGAIGGLGQIPPSEGATAAGHHPPAY
QPEGEGVGHQGSIPVTKLETFFRIKVHYKGKIVKEELVENDAGFRLMYQGNMDESMGRAD
LPVVTLPTPEGILDQIQAKHTKEILNNLGGLEIRKFDGMVCGHRWGLSRIYWGLCKHENS
PTPRELSKNTPEAIYNFRDYISGLMDFIQTSCESPSYALYFFLGEKWPDPKMRPWEKKLI
MIEVILTSLEGLKMMAVVNGASSLRSVELQLSLEQMMELC
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctaaatgggaaatcgaaactgacatggatttcccgagtaatgtcttacacctg
atcgtaaagcacaatatcgggaaaaagttcagtattaaaggagcactgacagacaagccc
gtctcatcgtcctggcatctgaagagttcgctgaaaaccccaagagaggccacaggactc
gagtctgattgcatcatggcccaaccaaaaccactcttcgtgccctggttgtatgaacaa
atccaaagtggaagttatcctggagtgtgttggaccaataaagagcaaagacagtttagc
attccgtggaagcacgctttaagacaggactctaacaatgttgatgtcctcatattcaag
gcgtgggctcagacgagcgtcgctggagatggcaggataaacggagatccctctgtttgg
aagagaaacttccgtagcgctcttcgtgctaaaggcttcaagattataattgacagcaag
aacgatgccgctaatccacataaagtctatcagtttccatctgaacctcattctgcagct
tcaggatccgagggctctcaagagactgatttttcaccagaactgtatgttgaggagagc
gacatgttccctacacatccgccccaaggtttggagcaagatttcacgggactaaacctt
caggaaagtccctcacgagttcatgaagtttggaatccagatcagttatatctggggttc
gaagaaccagtactctaccaagaaaccagtccatgtccagaatcccagtatactgagatc
cattaccaaatagtgaacactcatggacaattttcttcagctgagggtgctatcggtggt
ttggggcagattccgccgtctgagggggcgacggctgcgggtcatcatcctccagcatat
caaccagagggtgaaggtgtaggtcatcagggtagcattcctgtgacaaaactggagaca
ttttttcggattaaggttcattacaaagggaagattgtgaaggaagagttggtggagaat
gatgctggtttcagactgatgtatcagggaaacatggacgaatccatgggcagggctgat
ctaccagtggtcacactacctactcctgaaggtattctggatcagatccaggccaagcat
acgaaagaaattctgaataatctgggtggtctggagatcaggaaatttgatggcatggtc
tgtggtcaccgttggggattgagcaggatctattggggtctatgcaaacatgaaaatagc
ccaacacccagagagctctccaaaaacacacctgaagccatctacaacttcagagattat
atatcaggtttgatggactttattcagacaagctgcgaatctccttcttacgctctttac
ttctttctgggagagaagtggcccgaccccaaaatgaggccgtgggagaagaaactcatc
atgatagaggttattctgacttcactggagggtttgaagatgatggctgttgtaaatggg
gcgtcttcactgcgttcagtggagctccagctctctctggagcaaatgatggagctgtgt
tag
DBGET
integrated database retrieval system
