Sinocyclocheilus grahami (golden-line barbel): 107557368
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Entry
107557368 CDS
T04918
Symbol
scn4a
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107557368 (scn4a)
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
107557368 (scn4a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
Motif
Other DBs
NCBI-GeneID:
107557368
NCBI-ProteinID:
XP_016096245
LinkDB
All DBs
Position
Unknown
AA seq
1251 aa
AA seq
DB search
MDPFVDLGITICIVLNTLFMAMEHYPMSPDFEHVLLVGNLVFTGIFTAEMVFKLIAMDPY
YYFQVGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGN
SVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISQDCELPRWHMNDFFHSFLIVF
RILCGEWIETMWDCMEVAGANMCLIVFMMVMVIGNLVVLNLFLALLLSSFSGDNLSGGDD
DGEMNNLQIAIGRITRGVDWLKAFIVSMLRKILGKKPPDNNEGGGEGDIELYAINHLDEG
KMADGLTNCLPPTLTVPIAHCESDVEEDEDSDESSDEEDGKVKQHTLNDEESSVCSTVDY
RPPEPEPEPEEEEEPEPEEPESCFTEGCVKRFTCLNVDITEGWGEKWWNLRRTCFTIVEH
DYFETFIIFMILLSSGALAFEDINIERRRVIKTILEYADKVFTYVFIVEMLLKWVAYGFK
TYFTNAWCWLDFLIVDVSLVSLTANLMGYSELGPIKSLRTLRALRPLRALSRFEGMRVVV
NALVGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKFYHCVNTTTEERIPMDVVNNMSDCM
ALMHNNEARWVNVKVNYDNVGTGYLSLLQIATFKGWMDIMYAAVDSREVEEQPSYEINLY
MYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKSKFGGKDIFMTEEQKKYYNAMKKLGSKK
PAKPIPRPSNEIQGVVFDFITKQFFDIFIMVLICLNMVTMMIETDDQSAEKEDILYQINL
VFIVVFTGECILKMFALRHYFFTIGWNVFDFVVVILSVAGLMLSDIIEKYFVSPTLFRVI
RLARIGRVLRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLIMFIFSIFAMANFAYVKKQ
AGIDDIFNFETFGGSIICLFEITTSAGWDGLLLPILNSGPPDCDPDIENPGTDIRGNCGN
PGMGIMFFCSYIIMSFLVVVNMYIAIILENFNVAQEESGDPLCEDDFEMFDETWEKFDVD
ATQFIEYNRVFDFVDTLQEPLRIAKPNRLKLITMDLPIVTGDKIHCLDILLAVTHEVLGD
TIEMAAMKESIEAKFQMNNPTSASFEPITTTFRRKEEERAAIAVQRKYRRHLLKRAIRYA
CFMHRSKRKVRSQGDEDPPETEGLIAKRMDALYGSNPELAMAFELQRPMPPNARPPKPNS
VTQHRVSVTYPRPQGQLVLPVELTSEVILRSAPTTHGLCGSENATIKESIV
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggacccatttgtggatctaggtatcaccatctgtattgtgctcaacacacttttcatg
gccatggagcactaccccatgagtccggatttcgaacatgttctcttagtgggcaacttg
gtatttacaggaatcttcacagctgaaatggtgttcaagctcatagctatggacccctat
tactacttccaggtgggctggaacatttttgacagtatcattgtaaccctcagcctggta
gagttgggactggccaatgttcagggattgtccgttctcaggtccttccgtttgctacgt
gtcttcaaactggctaaatcttggccaacccttaacatgctgatcaagataattggcaac
tcagtaggtgccctggggaacctaacacttgtcctggccatcatcgtcttcatcttcgcc
gtggtgggcatgcagctttttggcaaaagctacaaggaatgcgtttgtaagatctctcag
gactgcgagctgccccgctggcacatgaacgacttcttccactctttcctcatcgtcttt
cggatcttgtgtggagagtggatcgagaccatgtgggactgcatggaggtggcgggagcg
aacatgtgcttgatcgtcttcatgatggtcatggttattggaaaccttgtggtattgaac
ctgttcctggccctgctgctcagctccttcagcggggataacctgtctggaggtgatgat
gatggtgagatgaacaaccttcagattgccattggtcgcatcaccaggggtgtagattgg
ctcaaagccttcatcgtcagtatgttgcgaaagattctaggaaagaaacctcctgacaat
aatgagggaggaggggaaggagacatagaactgtatgctataaaccacctggatgagggg
aaaatggcagatggcttgaccaactgtttgcctccaacactgactgtacctattgctcat
tgtgagtctgatgttgaagaggatgaggactccgatgaatcttctgatgaggaggatgga
aaggtaaaacaacacactcttaatgatgaagaatcttcagtttgtagcacagtggactac
cggcctccagaacctgagcctgagcccgaagaggaagaagaaccagagcctgaagagcca
gagtcctgtttcacagaaggttgtgttaagcgatttacatgtttgaatgtagacatcaca
gaaggatggggggaaaagtggtggaaccttcgaagaacatgcttcaccatcgttgagcat
gactactttgagacgttcatcatctttatgatcctccttagcagtggagcactggctttt
gaggatatcaacattgagcgccgcagagtgatcaagactatcctggagtatgctgataaa
gtctttacatacgttttcatagtggagatgttactgaagtgggtggcatatggtttcaaa
acctacttcactaatgcatggtgctggctggacttcctcattgtggatgtgtcgctagtc
agtttaacagccaatttaatgggatattctgagctgggaccaatcaaatctcttagaaca
ctcagggctcttcgaccccttcgagctctgtcaagatttgagggaatgagggtggtagtg
aatgcactggttggtgccattccctctatttttaatgtgctgctggtgtgtctgatattc
tggctcatcttcagcataatgggagtcaatctgtttgctggaaagttctaccactgcgtc
aacaccactacggaggaacgcatcccgatggatgtggtcaacaacatgagtgactgtatg
gcactgatgcacaacaatgaggcgcgctgggtcaatgtgaaggtcaactatgacaatgtg
ggaaccggctacctctctctacttcaaattgccacatttaaaggctggatggatatcatg
tatgctgcagtggattctagagaggtggaagagcagccatcatatgagatcaacctttac
atgtacctatattttgttattttcatcatttttggctcctttttcactctcaacctcttc
attggtgtcatcattgacaacttcaatcagcaaaagtccaagtttggagggaaagacatt
ttcatgacagaggaacaaaaaaagtactacaatgccatgaagaagttgggttccaaaaaa
cctgcgaaacccatccctcggccatcaaacgagatccagggtgtggtgtttgacttcata
acaaaacagttctttgacatctttatcatggtgcttatctgcctcaatatggtgaccatg
atgatagagacagatgaccagagtgctgagaaagaagatatcctgtatcagatcaatttg
gtcttcatcgtagtcttcacaggagaatgcatactcaagatgtttgccctcagacattac
tttttcactattggctggaacgtctttgattttgttgtggtcatcctttctgtagcaggt
ctgatgttatcagacatcattgagaagtactttgtgtctcccaccttgttccgtgtgatc
cggctcgccagaatcggccgtgtgctacgtctcatcaaaggggcaaaaggcattaggact
cttttgtttgccttgatgatgtcacttcctgctctcttcaacattggactgcttctgttc
ctcattatgttcatcttctccatctttgccatggctaactttgcctatgtgaaaaagcag
gcaggcatcgacgacatcttcaactttgaaacatttggtggcagcatcatctgcctgttt
gagatcacaacctcagcaggctgggatgggcttttgctgcctattctgaacagcggccct
ccagattgtgaccctgacatagagaaccctggtacagatatccggggtaactgtgggaat
cctggcatgggcattatgtttttctgcagttatattatcatgtcgttcctggtggttgtg
aacatgtacattgctatcattctcgagaacttcaacgttgctcaagaggagagtggagac
ccgctctgcgaggatgactttgagatgtttgacgagacgtgggaaaagtttgacgtcgat
gctacacagttcattgaatacaaccgggtgtttgactttgttgataccttgcaggagcct
ttacgaattgccaaacccaaccgcctcaaattaattaccatggatctgcccattgtaacc
ggcgacaaaatccactgtctggatattcttttggcagttacccacgaggttcttggagac
acgattgagatggctgccatgaaggagagcattgaagccaagttccaaatgaacaatccc
acatctgcctcgtttgagccaatcaccaccactttcaggaggaaagaggaagagcgcgca
gccattgcggttcaacgaaaataccggagacatctcctcaaacgtgctatccgctatgcc
tgcttcatgcatcgttcaaagaggaaagttaggagtcagggtgatgaggatcctcctgaa
accgaagggttaattgcaaagagaatggatgccctgtatggcagcaatccagaactcgcc
atggcttttgagctacagaggccaatgccgcctaatgcacggccacccaagcccaattcg
gtcacacagcatagagtatcagtgacctaccctcgaccacagggacaactcgtactacca
gtggagctcacaagtgaggtgatcctccggtctgcacccacaacgcatggcctctgcggt
tcagagaatgcaacgataaaagagtcaatagtataa
DBGET
integrated database retrieval system
