Sinocyclocheilus grahami (golden-line barbel): 107557667
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Entry
107557667 CDS
T04918
Name
(RefSeq) lysine-specific demethylase 2A-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107557667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107557667
04121 Ubiquitin system [BR:
sgh04121
]
107557667
03036 Chromosome and associated proteins [BR:
sgh03036
]
107557667
Enzymes [BR:
sgh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107557667
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107557667
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107557667
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107557667
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107557667
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
LRR_6
F-box
JmjC
PHD
LRR_4
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
107557667
NCBI-ProteinID:
XP_016096640
LinkDB
All DBs
Position
Unknown
AA seq
1099 aa
AA seq
DB search
MEESSRYSKRLRTGTRRRYQDDSISDDEIEGKRSFDVDEKLQSDRYNSDLVKIMDGKDFT
LEYIQREGLRDPIIFKKADGLGIKMPDPDFSVSDVKLFVGSRRMVDVMDVTTQKGIEMSM
GQWRRYYETPPSEREKLYNVISLEFSHTKLEHLVKRPTSVDMIDWVDNMWPRHLKESQRD
STNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVDMIDWVDNMWPRH
LKESQRDSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWYHILRGRKVDMIDWV
DNMWPRHLKESQRDSTNAIIDMQYPKVQKYCLMSVEGCFTDFHIDFGGTSVWCPVRVLLI
RTFPVVGNVQNVSRPKTKRYAFGSCLPRAPGSAPVLPPVPRPVKPSSSISALRRRRVRCK
RCEACLRTECGDCNYCRDMRKFGGPGRLKKSCVLRQCLAPALPHTAVCAICKEGYQESED
SESVQTLMECSECAQITHPECIQVPGEGIINKDLPSCWECPKCVQAKNYVRKAIKSLKTQ
NPSKRSWNAPNALRSLIQNVYRCPIARKQITRSFVITTHSDQKRIQTLAHGAESEIKLER
FPSPTASRENCEKDSIGKDEVFRLLSQFHLAALSGAERRERARLGERPQRRGGKAGEDEN
GDGHRNGESEESSEGGEATPSDTSVVQSDEVRGQGSCVTVTLQPSRGRRDPSAIVPKLEA
NLSSRSLPQNHKALLRPPLRNGAPRTDGPHSPADRLYINKSLALSSSPHTLTRSASKHSH
MVRSLRSNLKDSPHRLPRERIVKKTRSEKTKSSDSCPSSTLRPSVEQNGGNEPGWEREVW
VSVFRYLTRAELCVCMAVCKSWYKWGCDKRLWTRISLSRCRSISPQALTGIIKRQPVTLD
LSWAKISKKQLSWLINRLPGLKDLVLSGCNWASVSALSSPSCPLLRSLDLSWADGVKDAQ
IRELLNPPGSDNRSQMKNMQCLWLCGLEVTEATLRLIIRHMPLLTRLELSHCPITDGALN
LLSAVGSSTRNTLTHLNLAGCSRLTDRCLVYLRRLSCLSVLDLGGCKGVSRQACESFISE
LSVNALYCLSDDKLIQRIS
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagttcgcgttatagcaaacgcctgcggactggcacacggcggcgctaccaa
gatgacagcatttcagatgatgaaatcgaagggaagaggtcctttgacgttgacgagaaa
ctccaaagtgatcgatacaactcagatctggtcaaaattatggatgggaaagacttcacc
ttggagtacatccaacgggagggactccgggaccccattatcttcaagaaagcagatggt
cttggcataaagatgcctgacccagactttagtgtcagtgatgtgaaattgtttgtgggc
agtcgcaggatggttgatgtgatggatgtgaccactcaaaaaggcatcgagatgtcaatg
ggacagtggaggagatactacgagacgccgccttctgaacgtgaaaagctgtataatgtg
atcagcctggagttcagtcacacaaaactagagcatctagtcaagagacctacctcggtt
gatatgattgactgggtggacaacatgtggccaaggcatcttaaagaaagccagagagac
tccaccaatgccattatagacatgcagtaccctaaagtacagaagtattgtctgatgagt
gtcgagggatgcttcacagatttccacatagactttggtggcacatcagtctggtatcat
atcctcaggggaaggaaggttgatatgattgactgggtggacaacatgtggccaaggcat
cttaaagaaagccagagagactccaccaatgccattatagacatgcagtaccctaaagta
cagaagtattgtctgatgagtgtcgagggatgcttcacagatttccacatagactttggt
ggcacatcagtctggtatcatatcctcaggggaaggaaggttgatatgattgactgggtg
gacaacatgtggccaaggcatcttaaagaaagccagagagactccaccaatgccattata
gacatgcagtaccctaaagtacagaagtattgtctgatgagtgtcgagggatgcttcaca
gatttccacatagactttggtggcacatcagtctggtgcccggtgagggtattattaata
aggaccttcccagttgttgggaatgtccaaaatgtgtccaggccaaaaacaaagaggtat
gctttcggcagctgtcttccacgcgctcccggttcagcccccgtgttgccgccggtacct
cgacccgtgaagccgtcttcctccatctcagctctgagacgcaggcgcgtgcgctgcaag
cgctgcgaggcctgtctgcgcactgagtgcggcgactgcaactactgtagggacatgagg
aagtttggaggaccaggcagactcaagaagagctgtgttctccgtcagtgtcttgcaccg
gcgctacctcatactgcagtatgtgccatatgtaaggaaggctatcaagagtctgaagac
tcagaatccgtccaaacgctcatggaatgctccgaatgcgctcagatcactcatccagaa
tgtatacaggtgcccggtgagggtattattaataaggaccttcccagttgttgggaatgt
ccaaaatgtgtccaggccaaaaactatgtaaggaaggctatcaagagtctgaagactcag
aatccgtccaaacgctcatggaatgctccgaatgcgctcagatcactcatccagaatgta
tacaggtgcccgattgcacgtaaacaaatcactcgctctttcgtcatcaccacacactct
gaccagaagcgcatccaaacactcgcacatggtgcggagtctgagatcaaacttgaaaga
ttcccctcaccgactgcctcgagagagaattgtgaaaaagactcgatcggaaaagacgaa
gtcttccgactcttgtcccagttccaccttgcggccctcagtggagcagaacggagggaa
cgagccaggctgggagagagacctcagagacgagggggtaaagccggtgaagatgagaat
ggagacggtcatcgaaacggagagagcgaggagagcagtgagggaggagaggccactcca
tctgatacttctgtggtgcaaagtgatgaagtcagaggccaggggtcctgcgtcacggtg
acgttacagccgtcgaggggtaggcgtgaccctagcgccattgttcccaaactggaagcc
aacttgtcttctagaagccttcctcaaaaccacaaagccctgctccgtcccccactgcga
aatggcgcccctcgtacagatggtcctcattcccctgcggacagattgtacataaacaaa
tcactcgctctttcgtcatcaccacacactctgaccagaagcgcatccaaacactcgcac
atggtgcggagtctgagatcaaacttgaaagattcccctcaccgactgcctcgagagaga
attgtgaaaaagactcgatcggaaaagacgaagtcttccgactcttgtcccagttccacc
ttgcggccctcagtggagcagaacggagggaacgagccaggctgggagagagaggtttgg
gtgtccgtgttccgctacttgactcgtgcagagctgtgcgtttgcatggctgtttgcaag
agttggtacaaatggggctgtgacaagcgtttatggacgcgaatcagtctgagccgctgc
cgctctataagtccacaggccctcacgggcatcatcaaacggcagcctgtcacactggac
ctctcctgggccaaaatctccaagaagcagctcagctggctcatcaaccgcctgccaggc
cttaaagatctggtgctatcagggtgcaattgggcgtcagtctctgcactgagctctcca
agctgtcctttactgcgctctttagacctgagctgggccgatggtgtcaaagatgcacaa
atcagggagctgctgaacccaccaggcagtgataaccgttcccagatgaagaacatgcag
tgcttgtggctgtgtggtctggaggtgaccgaagccacgctgaggctgatcatcagacac
atgcctctgctcactcgtctggagctctcgcattgtcccatcacagatggtgctctcaac
ctcctcagcgccgtgggctcctccacacgcaacacactcacacacctcaacttagcaggt
tgcagccgcctgacagaccgttgtctggtgtatctgcggcgtttgtcctgtctctccgta
ctggacctgggcggctgcaaaggggtctcgcggcaagcgtgcgaaagctttatctccgag
ctgtctgtcaatgccctctactgcctatcagatgacaagctcatccagaggatatcttaa
DBGET
integrated database retrieval system
