KEGG   Sinocyclocheilus grahami (golden-line barbel): 107558119
Entry
107558119         CDS       T04918                                 
Name
(RefSeq) lysine-specific demethylase 2B-like
  KO
K10276  F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    107558119
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sgh03000]
    107558119
   04121 Ubiquitin system [BR:sgh04121]
    107558119
   03036 Chromosome and associated proteins [BR:sgh03036]
    107558119
Enzymes [BR:sgh01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.27  [histone H3]-dimethyl-L-lysine36 demethylase
     107558119
Transcription factors [BR:sgh03000]
 Eukaryotic type
  Zinc finger
   CXXC CpG-binding proteins
    107558119
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107558119
Chromosome and associated proteins [BR:sgh03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    107558119
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     107558119
SSDB
Motif
Pfam: PHD_4 zf-CXXC JHD F-box-like JmjC F-box Cupin_8 LRR_4 LRR_At1g61320_AtMIF1 RbpA Rubredoxin
Other DBs
NCBI-GeneID: 107558119
NCBI-ProteinID: XP_016097219
LinkDB
Position
Unknown
AA seq 1368 aa
MHSLVRRLLHRVEVVHVADRFDVGQDAGAHHEGEQVDGHQHSGASAESDEQSWGIVVVGV
KLYFHHGHLLNERKTQRSTCRRMYDENEDLSDVEEITNIRGFSLEDKLESNSYNSQFVQY
MEGKDFTYEYVQREALRTPLIFKAKDGLGIRMPDPAFTVSEIKGLVGSRRAVDVMDVSTQ
KGSEMSMAQFVRYYETPEDERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPRH
LKQKQTETTNVMSEMKYPKVQRYCLMSVKGCFTDFHIDFGGTSVWYHVFKGRKVFWLIPP
SPHNLSLYEDWVLSGKQSDIFLGDRSDSCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFG
GNILHSFNIPMQLTVYEIENRTKVHSKFRYPFFYEMCWYVLERYVNCLTRRSHLSLEFGV
HAGVTHLGYSIVFPGGLAVLSAEPKLVTESLVSAPRLDMEEDSCEARLEKTEGTTQPSSA
VSPYQTFKSPANDSEDSFKSLPLECPKTPSGSPGMEHSGKWTHLTEFELSGLKALVEKLE
SLPETKRCVPEGIEDPQALLDDVKVVLKEHADDNPKLAITGSPIVCWPKKTGKPRPLNRP
KSKMGSSPSAAAGSAAGGGKLSSSRGSSNARRRRTRCRKCEACTRKECGECHFCKDMKKF
GGPGRMKQSCIMRQCIAPVLPHTAVCLVCGEAGKEDTVENEEDKFNMMLMECSICSEILH
PACLKEKDSGGVVNDELPNCWECPKCSHSGKTGKQKRGPGFKYASNLPGSMLKEQRMNRD
VKEELESNLSTESYTSTVSPVMKKKKTEREDNPTCKSEDAFKKRSLKLEDNPLRKKRKLF
EKDSDSDSNVKKKKKRSKPEDLSASNVLGQIKTEREDEEEYDEVNRQELERRAFGFVPSE
EEDGDDEEEEEEEETMKKKGSPDENGKHEHKTSTAWEGDQSQGGFTQAGPSINSGVDAQL
RSQRKTKRKPRLPNKELSKELSKQLNQEIQNTEDRLAHQNGRAVKTEPDSDGEDRKPLKN
GSSHLRDWLGPKRELNGSLREQLPVSWIRTTPTPVIRPKPCRSPPKCVQMERHVIRPPPI
SPPPDGLPLDDGKNHVMRREVWMAVFSHFTHQDLCVCMRVCKTWNRWCCDKRLWTKIDLN
RCKSITPLMLSGIIRRQPVSLDLSWTNISKKQLSWLINRLPGLRILLLAGCSWAAVSALC
TSSCPLLRTLDVQWVEGLKDNQIRDLLSLPTDNRPGQLDSRSKLRNVENLCLAGLDITDT
SLKLIIKHMPSLSQLDLSYCNHITDQSVNILTAAGTTTRDSLTHINLSVCNRVTDLSLTY
FKRCGNICHIDLRYCKQVTKEGCEQFIAEMSVSVQFRLIEEKLLSKLS
NT seq 4107 nt   +upstreamnt  +downstreamnt
atgcattctctcgtgaggagactccttcacagagttgaggttgtgcacgttgctgaccgc
ttcgatgttgggcaggatgcaggtgctcaccatgagggcgaacaggtggacggccaccaa
cacagtggtgcaagcgctgaaagcgatgagcagtcctgggggatagtcgtggttggtgtc
aagctgtacttccaccatggccacctattgaatgaaaggaaaacacagcgctcgacctgc
agaaggatgtacgatgagaacgaggacttgtcagatgtggaggagatcacgaacatcagg
ggcttcagtttggaggacaaacttgagagcaattcatacaacagtcagtttgttcagtat
atggagggaaaagattttacttatgaatatgttcaaagagaagcactgcgaactccactc
atatttaaagccaaagatggactgggaattagaatgccggatccagcatttactgtaagt
gaaatcaagggtttggttggcagcaggcgagctgttgacgtgatggacgttagcacacag
aagggctcagagatgagcatggcacagttcgtccgctactatgagacgcctgaggatgaa
cgtgacaagctgttcaacgtcatcagcctggagttcagtcacaccaaactggagaatttg
atcaagagaccaactgtggtggatctggtggattgggtggacaatatgtggccgcggcat
cttaaacagaaacaaaccgaaaccacaaacgtcatgtctgagatgaaatatcccaaagtt
cagagatactgtctgatgagtgtaaaaggctgtttcactgacttccacatcgactttggt
ggcacatcggtatggtaccatgtcttcaaaggaaggaaggtcttctggctgattcctcca
agcccacacaatctgtctctgtatgaggactgggtgctgtcaggcaaacagagtgatatc
ttcctgggtgaccgttcagacagctgccagcgagtagagctgaaacagggctacacgttc
ttcatcccttcaggttggatccatgccgtctacactccagaagacaccctggtgtttggc
gggaatattctacacagttttaacattcccatgcagctcactgtctacgaaattgagaac
agaacaaaggtgcactccaaattccgctaccctttcttctatgagatgtgctggtatgtg
ttggagaggtacgtgaactgcttgaccagacgttcgcacctgagcctggagttcggcgtt
catgctggagtgacacatcttgggtattctatagtctttccaggaggtctggcggttttg
agcgctgaacccaagcttgtaactgagagtcttgtctctgctcctcggctggatatggag
gaggactcgtgtgaggcgcggttagagaagacagaggggacgacccagccctcctcagct
gtctctccctatcagaccttcaaatccccggccaatgattctgaagatagcttcaagtcc
ctgcctttagagtgtcccaagactccgtctggctcacctggaatggaacattccggcaaa
tggacccacttgacagagtttgagttgagtggactcaaggccttggtggagaagctggaa
tcccttccggagacaaagagatgcgttccagagggcatcgaggatccacaagcactgtta
gatgacgtgaaggttgtgctgaaggaacatgcagatgacaatccaaagttggccatcact
ggttctcctattgtatgctggccgaagaagacaggcaagccacggccgcttaatcggcca
aaatcaaagatgggctcgtccccatcggctgctgcaggctcagcagcgggaggagggaag
ctctcgtccagccgcggttcatctaatgcccggcgcagacggacacgctgcaggaagtgt
gaggcatgtacacgcaaagagtgcggggagtgccacttctgcaaggacatgaagaagttt
ggtggaccaggccgcatgaagcagtcctgtatcatgagacagtgcatagcgcctgttcta
cctcacactgctgtgtgtctggtgtgtggagaggctgggaaagaagacacggtagagaac
gaggaggacaagttcaacatgatgcttatggagtgctctatctgcagcgagatcctccat
ccagcatgcttgaaggagaaggattctgggggtgttgtaaatgacgagttgccaaattgc
tgggagtgtccgaaatgcagtcattctggaaagacaggaaaacaaaaaagaggcccaggg
tttaagtacgcctccaatctccctggctctatgctcaaagagcagcgaatgaaccgggac
gtaaaggaagagctggaatcaaacttgtctactgagtcctacacctctactgtttcacct
gtcatgaagaagaagaagacagaacgagaggacaatcctacctgcaagtcagaagatgca
tttaagaaacgttctctcaaattggaggacaacccactccgcaagaagagaaaactcttt
gaaaaggactcagactcagattccaatgttaagaaaaagaagaagcgctcaaagcctgaa
gatctctcagcctctaatgtcctgggacagatcaagacagaaagagaggatgaggaggag
tatgatgaggttaacagacaagaattggagaggagagccttcggttttgtgccctcagaa
gaggaggatggagatgatgaagaggaggaagaagaagaggagaccatgaagaagaagggt
agtccagacgagaatgggaagcatgaacacaagacctccactgcatgggaaggtgaccaa
tcacagggtggttttacccaggcagggcccagtattaactcgggtgttgatgcacagttg
aggagccagcgaaaaaccaaacgtaagcctcgcctgcccaacaaagaactgagcaaagaa
ctaagcaaacaactcaatcaggagatccagaatacagaggatcgactagcacatcaaaat
ggcagagcagtgaagacagaaccagatagtgatggagaggaccgaaaaccactgaagaat
ggaagcagccatctgagagactggctggggcctaagcgggaactaaacggatcattgcga
gagcagctcccggttagttggatcaggactacacctacccctgtcattcggccaaaacct
tgccgctctccaccgaaatgtgttcagatggagcgtcatgttattcgcccccctccgatc
agcccccctccggatgggctgcccctagatgatgggaagaatcacgtaatgcggagagag
gtgtggatggcagtgttcagccacttcacacaccaagacctgtgtgtctgcatgcgggtg
tgcaagacctggaacagatggtgttgtgataaaagactttggaccaagatcgatctgaac
cggtgcaagtcaatcactccactcatgctgagcggcattatccgaagacagccggtctcc
ctggacctgagttggactaacatctctaagaagcagctcagctggctaatcaacagatta
cctggtctgaggattctgttgctggcaggctgttcgtgggcagctgtatcagctttatgc
acatccagttgtcctttgctaagaactttagatgtgcagtgggtagagggacttaaggac
aaccagataagagacctactctccctgccgacagacaacagaccaggtcagttggacagt
agaagtaaactgaggaatgtggagaatctctgtctagctggtctggacatcacagataca
tccctgaagctgatcataaaacatatgccttcactgtcccagttggatcttagttactgt
aaccacatcaccgaccagagtgtcaacatcctcacggcagccggcaccacgaccagagac
tctctcactcacatcaacctttcagtttgtaacagagttacagacctgtcgttgacctac
ttcaagcgctgcggaaacatttgtcacatcgacctgcggtactgcaaacaggtgaccaaa
gagggttgtgagcagttcatcgcagagatgtccgtcagcgtgcagttcagactgatcgag
gaaaaactactgagcaaactgagctag

DBGET integrated database retrieval system