KEGG   Sinocyclocheilus grahami (golden-line barbel): 107562521
Entry
107562521         CDS       T04918                                 
Name
(RefSeq) TNF receptor-associated factor 6-like
  KO
K03175  TNF receptor-associated factor 6 [EC:2.3.2.27]
Organism
sgh  Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010  MAPK signaling pathway
sgh04120  Ubiquitin mediated proteolysis
sgh04140  Autophagy - animal
sgh04144  Endocytosis
sgh04517  IgSF CAM signaling
sgh04620  Toll-like receptor signaling pathway
sgh04621  NOD-like receptor signaling pathway
sgh04622  RIG-I-like receptor signaling pathway
sgh05132  Salmonella infection
sgh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:sgh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107562521
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    107562521
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    107562521
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    107562521
   04140 Autophagy - animal
    107562521
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    107562521
   04621 NOD-like receptor signaling pathway
    107562521
   04622 RIG-I-like receptor signaling pathway
    107562521
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    107562521
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    107562521
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sgh04131]
    107562521
   04121 Ubiquitin system [BR:sgh04121]
    107562521
Enzymes [BR:sgh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     107562521
Membrane trafficking [BR:sgh04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Ubiquitin E3 ligases
    107562521
Ubiquitin system [BR:sgh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRAF proteins
    107562521
SSDB
Motif
Pfam: TRAF-mep_MATH MATH_2 zf-TRAF zf-TRAF_2 TRAF6_Z2 CEP135_TSGA10_CC DM ATG16
Other DBs
NCBI-GeneID: 107562521
NCBI-ProteinID: XP_016102634
UniProt: A0A672MPB3
LinkDB
Position
Unknown
AA seq 527 aa
MAYNDSDKSSLDDVCCDDQYPSCAAAVDKDRDSYLSPTENPSTISVSASIPPDQQGYDEE
FDPPLESNLLYRVKNVKYNFLFSGRDTGQKCPVDNEVLLEEQLFPDNFAKREILSLTVRC
PNVGCCDKMELRQLEKHLSQCKFATVPCPQCLESVRKSHLDEHKSQQCLQRLMTCPACAG
SFVYADKQIHEQICPFANTVCEYCEMELIRDQLALHCDTDCLKAPVACTFSSFGCREKMP
RNELAQHMQEFTQMHMRYMAEFLRSQTLSSCPVPSIAAHSSSDERGATARAPDSCQCRQE
LMNLRETVLELEGRLVRQDQQIRELCIHNETQKTQVTELRRKLSSLEEATRELEAQQYQG
VYVWRLENFSLHLRNQEAGQPIVLHSPPFYTGRPGYKLCLRLHLQTPSAPRCSNYISLFV
HTMQGEFDSQLSWPLQGMIRLAVLDQVEGQHHVEVMETKPDLQAFQRPTVLRNPKGFGYV
TFLHLQALQQRGFVKDDVLLVRCEVTPRFDASLRREGVQPRGSEPSL
NT seq 1584 nt   +upstreamnt  +downstreamnt
atggcttacaatgactctgataagtccagcctcgatgatgtctgctgtgatgaccaatac
cccagctgtgcagcagccgtggacaaagacagggattcgtatctgagcccgacagagaac
ccctccaccatcagtgtctctgctagtatccccccagaccagcaaggctatgatgaggag
tttgaccctccgctagagagcaatttgctttacagggttaaaaatgtcaaatataacttc
ctattttctggcagggacacagggcagaaatgtccagttgacaatgaggtgctgcttgag
gaacagctcttccctgataactttgctaaacgagagatcctctcacttactgtccgatgt
cctaatgtaggatgctgtgataaaatggagttgcgccaactggagaaacacttgtctcag
tgtaagtttgccacagtgccatgccctcagtgtctggagtctgttcgtaagagccatctg
gatgaacacaagagccagcagtgtttacagcggcttatgacctgccctgcctgtgcaggg
agctttgtgtatgctgacaagcagattcatgaacagatttgtcctttcgccaatacagtg
tgtgaatattgcgaaatggagcttattcgggatcagttggcattgcactgtgacacagac
tgtcttaaagctcctgtagcctgtactttcagctcttttggttgtcgtgaaaagatgcca
agaaatgaactggcccagcacatgcaggaatttacacagatgcacatgcgttacatggct
gagttcctgcgcagccagacactcagtagctgcccagtgccgtcaattgctgcccactct
tcgtcagacgaacgtggagcaactgcccgagccccagattcttgccagtgtagacaggag
ctgatgaacctgcgtgagacggtcttggaactggagggtcggctggttcgtcaagatcaa
cagatccgggagctgtgcatccacaatgagacacagaaaacccaggtcacagagctacgc
cgaaagctgagctcactggaggaggccacccgagagctggaagcccagcagtatcaaggt
gtctacgtatggcgtttggagaacttctcacttcacctgcgcaaccaagaggccggtcaa
cccatagtcctccacagcccacctttctacactggccggccggggtacaaactctgccta
cgactgcatctgcaaactcccagtgcccctcgctgttccaactacatctcactttttgtg
cacactatgcagggtgagtttgacagccagctctcctggcccttgcagggcatgatccga
ctggcagtgttggaccaggttgaggggcagcatcatgtggaagtgatggagaccaagccg
gacctgcaggccttccagaggcccactgtcctgcgcaaccccaagggttttggctatgtt
actttcctgcacctacaggcgttgcagcagcgtgggtttgtgaaagacgacgtgctgttg
gtgcgctgcgaagtgacaccacgatttgatgctagcctcaggagggaaggggtccaacct
cgggggtcagaaccttcactttga

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