Sinocyclocheilus grahami (golden-line barbel): 107563411
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Entry
107563411 CDS
T04918
Symbol
cacna2d1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107563411 (cacna2d1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
107563411 (cacna2d1)
04261 Adrenergic signaling in cardiomyocytes
107563411 (cacna2d1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107563411 (cacna2d1)
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107563411 (cacna2d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
Cache_3-Cache_2
DUF2201
dCache_2
CSPP1_C
Motif
Other DBs
NCBI-GeneID:
107563411
NCBI-ProteinID:
XP_016103768
LinkDB
All DBs
Position
Unknown
AA seq
1108 aa
AA seq
DB search
MMVRSRSTDLIMNPFRISALVMFLFASVHISCPSQFPSPLVIKEWVDQLQQELVSLADTA
SAGNNLRQIFMDNQNYFTVKTNNAAQLVETAARNIENFLKKRATALETLATAAENFQMEH
QWKDEFGEDDIVYYNAKDNLEANETEGRKNRIRPEFKEDPSFKNRLTSYNHTAVHIPTDI
YDGSTIVLNELNWTEALQDVFKKNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFNHLVQANVRNKKILKDAVQNISAKGITNYTKGFEFAFDQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFSRYNIDRKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRE
GGSRSQHQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNR
IQSRHRRLSKKLALTFPEEPVTLDFLDAEQENDIKVQIRTLMIDRDPGEKTIETLVKSQD
ERYIDRGIRTYNWAPVNGTDYSLALVLPEYSLHYIEANLGDTIKQAMWNKAFETMQQENF
EEYGYTFIAPREYCKDLKVSFNNTQFLVDFNEYIDRKTPNGPLCNLTLVNRLLLDAGLTA
DLVKVWKEQNVDGVLARFVATDGGITRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIF
TAPYVNKSRESGYESGMLVSKAVDLDINGAKLKPAVVGVKLNVSAWMNSFINATTKKNCK
DEICGCLRNDKQVDCVILDDGGFLLMSNQDEYITQIGQFFGEVDPVLMITLVNTSLFSFN
KTYDYQSVCDPERETKAAAGPRSIYVPTIADMLTVGWWASTAVWSVLQQLLLSLTLPNVV
GTAYSEDDLSDAFSKESCITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFL
ISDAKSSCLSCDPKPLRQAEQPSTGPDPCVLAQNPRYRKGPDVCFDNNADEDATDCGGGC
SLSPSLWPMLGLQLLLLWLLTGTRTYLS
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgctcgagatcaacggatctgatcatgaatccgttcagaatctccgcgctg
gtgatgttcctcttcgcatctgtccatatctcgtgcccctcgcagttccccagtccgctc
gtgataaaagaatgggtagatcagctgcagcaggagctggtttctctagcagacacagcc
agcgctgggaataatctaagacagatctttatggataatcagaattatttcactgtgaaa
acaaataatgcggcacagcttgtggaaacagcggcacggaatatagaaaattttttgaag
aagcgagccacagctctagagactttggcaaccgcagcagagaatttccaaatggagcat
caatggaaagatgaatttggagaggacgatatagtttactataatgccaaggataatctt
gaagccaacgaaacagaaggaaggaaaaaccggatcagacctgaatttaaagaagaccca
tcattcaaaaaccgcctcacctcctacaaccatacagctgtgcatatccccacggacata
tatgacggctctaccattgtgttaaatgagctgaactggactgaagcattgcaggatgtc
tttaagaaaaaccgagaagaggatccaacgctactatggcaagtgttcggcagcgctact
ggattagctcgctattacccagcttccccttggatggatgccaggaaaacacccagcaaa
atcgacctgtatgatgtgcgccggcgaccttggtatgttcaaggtgccgcttcgcccaag
gacatgctgattcttgttgatgcgagtggaagtgtgtctgggctgacccttaaattgatc
cgaacctctgtcagtgaaatgctggagacactttctgatgatgattatgtcaatgttgtc
cattttaacacaaaagtgaataacacagcgtgtttcaaccacctggttcaagctaacgtt
cgcaataagaagatcttaaaagatgcagtgcagaacatctcagccaagggcatcaccaac
tataccaaaggcttcgaatttgccttcgatcagctgtcaaatccaaacatcaccagagca
aactgcaacaagatcataatgttgtttactgatggaggcgaggagagggcagaggagatc
tttagcagatacaacattgacagaaaggtacgtgtgttcacattctctgtgggtcaacac
aactatgacactgggccaataaagtggatggcctgcgcgaacaagggatatttctacgaa
atcccatccattggagccattcgcataaacacacaggagtatctagatgttttgggcagg
ccgatggtccttgcagatgccaaacaggtgcagtggaccaacgtgtacctggatgctctg
gagttgggcctagtcatcactggcacgctacctgttttcaacaagaccaaatccagggag
ggcggatctcgaagccagcatcagaaccagttgattttaggagtgatgggggtggatgtg
tctctcgatgatatcaaaagactgacgccccgctttacaattggtcctaatggatattat
ttcgcaattgatcctaatggttacgtgctgctccatccaaacctgcaaccaaagaacagg
attcagagccgtcaccgcaggctaagtaaaaagcttgctcttacgttccctgaggagcct
gttacactggattttctggatgcggagcaggaaaatgatattaaagtccagatacggact
ctgatgattgatagagaccctggggagaaaacgatagaaacacttgttaaatctcaagat
gagagatacattgatcgaggaatcaggacgtacaactgggcaccggttaacgggacagac
tacagcctggccttggttttgcctgaatacagtctgcattacatcgaggcgaacctgggg
gacactataaaacaagccatgtggaacaaggcctttgaaaccatgcagcaggagaatttt
gaggaatatgggtacacctttattgcacccagagaatactgcaaggacctcaaagtctca
ttcaacaacacccaatttctggtggacttcaatgagtacattgacaggaaaactccaaat
ggtcctctgtgtaatctcactcttgtaaaccggttgctgctggatgccggtctcacggca
gacctcgtaaaagtctggaaggaacagaatgtagatggagttttggccaggtttgtggct
acagatggaggcattacacgtgtgtatcctaaaagtgctggggaagaatggggtgaaaac
tctgagacctatgactcaagtttttacaaaaggagtttggacaatgacatatacatcttc
accgccccatacgtcaacaagagcagagagtctggttatgagtccggtatgcttgtcagt
aaagcagtggacttggacattaatggagcaaaactcaaacctgctgtggtgggagtcaaa
ctcaacgtatcggcctggatgaacagcttcataaacgctactaccaagaaaaattgcaag
gatgagatctgcgggtgcctcagaaatgataagcaagtggactgcgtgattctggatgat
ggcggctttctgctcatgtccaatcaggatgaatatatcacacagataggtcagttcttt
ggtgaagtggaccctgttctgatgatcactctggtcaacacctcactgttctcctttaat
aaaacctacgactaccaatccgtctgcgacccggagagagaaactaaagctgctgccgga
ccccgctctatatacgtgccaacaatcgcagatatgctgactgtaggctggtgggcctcc
actgcggtctggtcagttctgcagcagctacttctcagtctgactctcccaaatgtagtg
ggaacagcgtactcggaggatgacctctcggatgcgttctccaaagagagctgtatcacc
gaacagacgcagtacttctttgagaacgagaacaaatctttctctggagctatggactgt
ggaaactgctccagaatgtaccgggcggagaagctcccaaacacgaatttggtatttttg
atctctgacgcaaagagttcctgcctctcctgcgatcccaaaccgctgagacaagccgaa
cagccctctactggtcctgatccatgtgtgctggcccagaaccctcggtacaggaaagga
ccggacgtctgctttgacaacaacgcggatgaggacgcgactgactgtggtggtggctgc
agtttgagtccgtctctctggccgatgttgggtcttcagctccttctactctggctgctt
actggaaccagaacctatttgtcctga
DBGET
integrated database retrieval system
