Sinocyclocheilus grahami (golden-line barbel): 107568743
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Entry
107568743 CDS
T04918
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1b allele 3-like
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
107568743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107568743
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sgh04054
]
107568743
Membrane trafficking [BR:
sgh04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107568743
Pattern recognition receptors [BR:
sgh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
107568743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
FIIND
CARD
UPA-FIIND
NLRC4_HD2
NOD2_WH
AAA_25
nSTAND3
AAA_16
Motif
Other DBs
NCBI-GeneID:
107568743
NCBI-ProteinID:
XP_016110224
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MSSFEAQFVDGNDAALIQKVTSAMAIADELKNKGMLCDEKYLEIRAEQTSQGKMRMLFEA
LNSGGDRVKHDFYYALRDHEPHLFKDLGYFSWKHKPPVHDSKVATRHKSWREMILKYKAS
VIDKCKFVIECNLPPVERVELTARYTEPVIIQKSKKTDEKYYRKLVRFVNHFGQKTKPSS
QLLSNDKNHSIRIDQLFSPDSDGNRPKTVILSGDSGRGKSFMLQKIMLDWASGELYSENF
DVVFLLKCEELKCISEEMNLFGLLSWSCNLTSDQISHILELTPRKVLILIDGSDEFSFDS
HIQISSPTNPSQKALPMDTLRRLLNGLILPESFLLVTTRSAADTEMNLLKGPLRFTEIMG
FSERGVQEYFQKFFQDEQLFSKTHESLKANESLLTACSVPLLCWMVCFCLKKHLTDDDRV
MRELKTTTSIYMLFVSTLLEHHGHSQSVLSTLKSLGLLAEEGMKKQQVFLDEKCVAKTGL
DPATSVFLYKDSLKINNRQVPVFRFMHFSFQEFFTALSYVLMDEEDSWLKIRELLYRVDW
GEKIYRPSPERSNPIHSIMLFLCGLSNEEMSSSLFENIKWTVPHTINLKQELHKSVIRRT
TYHENKLLFALHCLYELQDERFGSEALITQNLMDLPNISLRSTDCWVLLNCLQCFPRIRY
LNLMYCDLTAEKLKILQPALCMCETLRLSVEHLSEAGDLIQSLDESKILSRLNAQEDEYS
AESPRWSLDLSVTHGVVLLSLLEMTDSSLRSSVLNISLTCPLSEISSTDWTLFLQRLSKA
GKVAEDSSALDELVSLLLSSFHSVGLKTLHLDLVSLNKSWASGIISLVQTCSSLQQLSVG
VTGLLLEEGLMLLKKSLTDPHCTVTIEGRKCSKPTDQCKEQDWSHSCNKKVKIHFKPKVL
EKLEERKCSKPTDQCKEQDWSHSCNKKVKIHFKPKVLEKLEELNISEPSGLNLHPLPVCQ
FCVHIGDSDQWVQVEPSVCTESDEGGSEFRISTPAGRFECSRTRMRWVCAGDVTLQYRAV
DGRFLRAELEKLQRERIGPVIDVTVISGKLEEAHLPHYACLAESDPSLKDDIKVLSVEEE
GISFESVELTRFHAKILQPYFSPKTLLMKLGIAVKLHCNLLIFMTHKDPIILHVYFFPID
SVFEEKIKKEKQLSHQIDLPRPETPLEMNKQHSLEVPGAFVQPKKIKLKGDIKPNFFEVN
LSVVDDINMTLNRVDDQKSVWTAKICKALFGFMVPFESNLLQTGQKHKTPQVAVNFDKVQ
FFDRNWCDLIKSIKNVHAIADKLCRKQIIHEELYTEITLPTSTSEASMRKICSIVRSGSD
TVKKIFISIILEEDPDLLSHLPLPDS
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctttgaggcccaatttgtggatggaaacgacgctgcgcttattcagaaagtt
acctcagcgatggcaatagcagatgaactaaaaaataagggtatgctatgtgatgaaaaa
tatttagagatcagagcagaacaaaccagccagggcaaaatgagaatgctgtttgaagca
ctaaattctggaggagacagagtgaagcatgacttttattatgctctgagagatcatgaa
ccacacctcttcaaagacctgggttatttcagctggaaacacaagcctccagttcatgat
tccaaagtagcaaccagacataaaagttggagggagatgattcttaagtataaagcatca
gtcattgataaatgcaagtttgtgatcgagtgtaatcttccacctgttgaacgtgtggaa
ctgaccgcccgttatactgaaccggtcatcattcagaagagcaaaaaaacagatgagaaa
tactatcgtaaattggtgaggtttgtgaatcattttggacaaaaaacaaaaccatcatct
caactgttatcaaatgacaagaatcacagcatcagaatagaccagctgttcagtcctgac
agtgacggaaacagaccgaaaactgtgattctcagtggagattctggaagagggaaatct
ttcatgctacagaagatcatgttggactgggcttctggagaactttactctgaaaacttt
gatgtagtttttctgttgaagtgtgaagagctgaagtgtatttctgaggagatgaacttg
tttgggcttttgagctggagctgcaacttaacatcagatcagatctcacatatactagag
ttaacaccaaggaaagtcctcatcctcattgatggaagtgatgagttctcttttgattca
catattcagatatcatcacccactaatccatcgcagaaagccctaccaatggacactctt
aggcgtctgctgaatggactgattctgcctgagtctttcctgctggttaccaccagatca
gctgcagatacagaaatgaatctcctcaagggacctctgcgtttcactgagattatgggt
ttctctgagagaggggtgcaggagtacttccagaagttctttcaggatgagcaactcttc
agcaaaacacatgagagtctaaaagcgaatgaaagcctcctgactgcctgctctgtgcct
ttgctgtgttggatggtctgtttttgtctgaagaaacacttaaccgatgacgatcgtgtg
atgagagaactaaagacaaccacctccatatatatgctctttgtgtccactctactagag
catcatggccacagtcagtctgtcctttccacgctgaagagcctgggtctgctggcagag
gaagggatgaagaagcagcaggtctttcttgatgaaaagtgtgtagccaagactggttta
gatccagctactagtgtgttcttgtataaagatagtttgaaaataaataacagacaggtg
ccagtgtttaggtttatgcatttcagctttcaggagttcttcactgctctttcttatgtt
ttaatggatgaggaagattcctggttgaaaataagggagctgctttacagggtggattgg
ggagaaaaaatctacaggccatcaccagaaagatcaaatcccatccattccattatgctg
tttctctgtggtctctcaaatgaggagatgagcagctcactctttgaaaatatcaagtgg
actgttcctcacaccataaatctgaagcaagaactgcataaaagtgttattagaaggaca
acatatcatgaaaataaactgttatttgctctccactgtctgtatgagctccaagatgag
agatttggcagtgaagctctgattacacaaaacttgatggatctgcctaacatttccctg
aggagcacagactgttgggtgctgctgaactgtcttcagtgctttccacgcatcagatac
ctgaacctcatgtactgtgatttaacagccgagaaactcaagattcttcagccagcactc
tgtatgtgtgagactctgaggttgtcagtggagcacctgtcagaagctggagatttgatc
cagagtcttgatgaatcaaaaatcttgagcaggctgaacgctcaagaagatgaatacagt
gctgagagtcccagatggtcacttgacctgtcagtcactcatggagttgtcttgttgtct
ttgctggaaatgacggattcttctctgaggagctcagtcttaaacatcagtcttacatgt
ccactatcagagatatccagcactgactggacactcttcttacagagactcagcaaggca
ggaaaagtagcagaagactcttcagctcttgatgagcttgtcagtttgctgctgtcttca
tttcactctgtgggtttgaagacactgcatctggatttggtcagtttgaataagagctgg
gcttctgggatcatttccctcgtccagacctgcagcagtctacagcagctcagtgtcggt
gtcactggattgcttttggaggagggactcatgttactaaagaaatcactgacagatcca
cactgcactgtgacgattgaagggaggaagtgcagtaaacccactgaccagtgcaaagaa
caggactggagccacagctgtaataagaaagtgaagattcacttcaaaccaaaggttttg
gaaaagctggaagagaggaagtgcagtaaacccactgaccagtgcaaagaacaggactgg
agccacagctgtaataagaaagtgaagattcacttcaaaccaaaggttttggaaaagctg
gaagagctgaacatctctgaaccgtctggactgaatcttcacccgcttccagtgtgtcag
ttttgtgttcacattggtgattctgatcagtgggttcaggtggagccgtcagtctgtaca
gaatcagatgaaggagggtcagagttcaggatcagcactccggcgggtcgattcgagtgc
agcaggaccagaatgcgatgggtctgtgctggtgacgtcactctccagtaccgtgcagtg
gatggacgtttcctcagagcagagctggagaaacttcagcgtgagagaattggacctgtg
attgatgtgacagtgatctcagggaaactggaggaggcccatctgcctcattacgcctgt
ttagcagagtcagacccctctcttaaagatgatataaaggtcctcagtgttgaagaagag
ggaatatcctttgaatcagtggagttgactcgttttcatgctaaaatactccaaccatat
ttttctcctaaaacattgcttatgaaactagggatagcagtgaaactgcactgtaatcta
ctgatcttcatgacacacaaagaccccatcatcctccatgtgtattttttcccaatagat
tccgtttttgaagaaaaaattaaaaaagagaaacaattgagtcatcaaatcgatcttcca
agacctgaaaccccattagagatgaataaacaacacagtcttgaggttcctggtgctttt
gtccaacccaaaaagatcaagctaaaaggagacatcaagccaaacttttttgaggtcaat
ctttctgtggtcgatgacatcaatatgactctcaaccgagtggatgatcagaaatcagtc
tggactgcaaaaatttgcaaagctttgtttggattcatggttccttttgaatctaatttg
ttgcaaactggacaaaagcacaagacaccacaagtagctgtcaactttgataaagttcag
ttttttgatagaaattggtgtgaccttattaaaagcattaagaatgtgcacgccatcgca
gacaaactgtgtcgcaagcaaatcattcatgaagaattatatactgaaatcacacttccg
acttcaaccagtgaagccagcatgaggaagatctgtagcatagtgcgtagtggtagtgac
actgtaaaaaaaattttcatctccattattctggaagaagatcccgaccttttaagtcat
ctgcctttacctgactcttaa
DBGET
integrated database retrieval system
