Sinocyclocheilus grahami (golden-line barbel): 107582288
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Entry
107582288 CDS
T04918
Name
(RefSeq) TNF receptor-associated factor 3-like isoform X1
KO
K03174
TNF receptor-associated factor 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107582288
04621 NOD-like receptor signaling pathway
107582288
04622 RIG-I-like receptor signaling pathway
107582288
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107582288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4
Crescentin
zf-C3HC4_2
zf-RING_UBOX
FlaC_arch
Sina_ZnF
zf-TRAF_2
RING_XB3-XBAT31
BLOC1_2
ATG16
FapA
Fez1
Motif
Other DBs
NCBI-GeneID:
107582288
NCBI-ProteinID:
XP_016123543
UniProt:
A0A672LZY7
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRSRHEPGFLPVHGGFRDRFVTTPEAKYCCESCR
LVLCNPRQTECGHRFCESCITDLLSKPNPVCPADVEPLFEDKIFRDVCCNREIMALKVYC
RSEKNGCKEQMSLQQVMDHLEVCPYFEVPCPLGKCKEKMIRKDMSEHLSHKCKHREITCE
FCNHKMAFTELQKHKDTVCPAFPIACPNQCSFSSILRSELSIHQHDCPKAQVTCSFIRYG
CSFKGLNQEMREHESSFASEHLRMMVVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQNEEMREKIRQLEQKVVSVQMLMSTHSEKLLEVEMELRELRPLRAMREEVEALRASVE
SMRSNVASLDSGRVGSSPGSHTLGSLEQQLSRHDDTMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKALSLYSQPFYTGYFGYKMCARIYLNGDGMGKGTHLSLFF
VVMRGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPNVEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggtccaggcacgagccgggtttcttgcccgtgcatggc
ggcttcagggaccgctttgtcacgacacctgaggccaagtattgctgcgagtcttgcagg
ctagtgctctgtaaccctcggcaaactgagtgtggacatcgcttctgcgagagctgcatc
acagacttgctcagtaagcctaacccagtttgtccagctgatgtagaaccactttttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaaggtctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgagtttacagcaggtcatggaccatttg
gaagtttgtccgtacttcgaggtgccgtgccccttgggaaagtgtaaggagaagatgata
aggaaagacatgtctgagcacttgagccacaaatgcaaacacagagagataacctgtgaa
ttctgcaatcacaagatggctttcactgagttacagaaacacaaagatacagtctgtcct
gcatttcctatagcatgccctaatcagtgctcgttttcttccattctaagaagtgagcta
tccattcatcagcatgactgtccaaaggcccaggtgacctgctcctttattcgctacgga
tgctcctttaaggggctgaatcaagagatgagggaacatgagtccagttttgcatctgag
cacctgagaatgatggtggtcagaaacaccacactagaggccaaggtagaggatgttaag
agtgagctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgcagaggtt
gagactcagaatgaggagatgagagaaaagatcaggcagctggagcagaaggttgtcagc
gtgcagatgttgatgagcactcactcagagaaactgcttgaggttgaaatggagctgcgg
gagcttcgtcctctgcgagctatgagggaggaggtggaggctctgagagcgtccgtggag
agcatgcgttcaaatgtagcttctctcgattcgggtcgtgttggttccagtcctggttct
cacaccctgggctccttagagcagcagctctcacgtcacgatgatacgatgagtgtccat
gacatccgcctggcagagatggacctgaagctgcaggtgttggagacggccagcttcaac
ggtacactcatttggaagatccgtgactacaaaagacggaaacaagaagccgtggcctcc
aaagccctctcgctctacagccagcccttctacacgggctatttcggctacaagatgtgt
gcccgcatctatctcaatggggacggaatgggtaaaggcacacatctctcgctctttttc
gtggtcatgcgtggggaatatgacgccttgctgccatggccgttcaaacagaaagtaaca
ttaatgttaatggaccaggggccagcacggaaacacttaggtgatgccttcaaaccagac
cccaatagcagtagctttcgccggcccaatgttgaaatgaacatcgcctcgggctgtcca
ctctttgtggctcagactgtcctggagaacggaacctacatcaaagacgacaccatcttc
atcaaggtgactgtagacacctctgacctcccggacccttga
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integrated database retrieval system
