Sinocyclocheilus grahami (golden-line barbel): 107588322
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Entry
107588322 CDS
T04918
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04510
Focal adhesion
sgh04518
Integrin signaling
sgh04540
Gap junction
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107588322
04020 Calcium signaling pathway
107588322
09133 Signaling molecules and interaction
04518 Integrin signaling
107588322
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107588322
04540 Gap junction
107588322
09142 Cell motility
04810 Regulation of actin cytoskeleton
107588322
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sgh01001
]
107588322
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sgh04090
]
107588322
Enzymes [BR:
sgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107588322
Protein kinases [BR:
sgh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107588322
CD molecules [BR:
sgh04090
]
Proteins
107588322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
C2-set_3
RIFIN
Motif
Other DBs
NCBI-GeneID:
107588322
NCBI-ProteinID:
XP_016131861
UniProt:
A0A672SW26
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MKSFSRSRLTAMTTGLLLLCLGSSGLELNPSVSQVILSINSSFSITCSGWNYVTWRFKRE
ENVPEFHVEKPSSSSSVLSLEQVMWRHTGVYVCSENGTDETREVAVFVPDPEVWFLENDH
LMVTKTREEGTIPCLVTNPSINVTLYESDSEIMVEGSYNPSVGFSAALEDRTYKCKGELN
GEEKESVSFYVFSIFAPEALDPYINASKTVLKQGETLNVNCTIHGVELVFFSWDFPHKDV
GDIEPLTDVLSFMSMRSCLNITDVSLARSGQYVCHVQEGVLNQRASASINITVLEKGFVA
LSSHLGRNVSALLGENVELKVEIEAYPKPSVQWTKDGAAIRGHSTRQEQETGFVSTLTVV
RIRLEQMGLYTVSVQNQDDFKEMTFDLEVKVPPQITELSDHQLPGKKHAVTCVAEGVPSP
SIQWFSCDSMPKCNNRSVAWSPLVEDPEKVTIQTNVSYNITRKIHQVHSQVTLLLPQLLT
IRCEARNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYEIR
WKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDGLVLGRTLGSGAFGRVVEATAYGLGRS
QSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNMLGACTKHGPLYLVTEYCR
FGDLVDYLHRNKHSFLQYYADKNHIANGSQICNDSDVPTGKEYVSFGSERDGGYMDMTKD
EQTEYVPMQELMDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPLLSYTDLVG
FSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGSTFL
PLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMAK
PSYASDDIYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSDHPAV
ARVKPHVPSPFPNAFPLQSPSSDLSPNPAPRPQADGELHNEYIIPIPDPRPEEETQDGPV
LMEIPSSSLGSDEETVSMETPSTEPEHEELLPDHSRSPEVEESFL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcagccggtcccgactgactgccatgacaacaggtttgctcctgctctgt
ctaggtagctcaggtctggagctcaatcccagcgtctctcaggtcatcctctccatcaac
tcctccttcagcatcacctgctccggctggaattacgtcacctggcgcttcaaacgggag
gagaatgttccggagttccacgtcgagaagccaagttcgtcctccagcgttctcagtctg
gagcaggtgatgtggagacacacgggcgtttatgtgtgttcggagaacgggacagacgag
accagagaggtggccgtctttgtgcctgatcctgaggtgtggttcctggagaacgatcat
ttaatggtgactaagacgagagaagaaggcacgatcccatgtctggtgacaaatccctcg
ataaatgtcacgctgtacgagagtgactcagagataatggtggagggttcgtacaacccc
agcgtgggcttcagcgccgccctggaggacagaacctacaaatgcaaaggagagctaaac
ggagaggagaaagagtccgtcagcttctatgtcttcagtatatttgctcccgaggctctg
gatccctacatcaacgcctccaaaacggtcctgaaacagggcgagacactgaacgtcaac
tgcaccattcacggcgtggaactcgtcttcttctcctgggactttccccacaaagacgtg
ggggacattgagcccttgactgacgtcctgtcgttcatgagcatgcggtcctgtctcaac
atcacagacgtgtctctggccagatcaggacagtatgtttgtcacgtgcaagagggtgtg
ctgaaccagagagcttcagccagtattaacatcactgtactggagaaaggcttcgtggct
ctttcttcacatctgggcaggaacgtctcggcactgctcggagaaaacgtggagctgaag
gtggagattgaggcgtatcccaaacctagcgtgcagtggactaaagacggcgctgctatc
agaggacacagcaccagacaggaacaagagacggggtttgtcagcacactgaccgtggtc
aggatccgactggagcagatgggtctctacaccgtcagtgtccaaaaccaagatgacttt
aaagagatgacctttgacctagaggtgaaagttcctcctcagataactgaactctctgac
catcagctgccgggtaagaagcatgcggtcacctgtgtggcggagggagtgccgtctccc
agcattcaatggttcagctgtgacagcatgcccaagtgcaataacagaagtgtggcgtgg
agccccctagtggaggatcctgagaaagtcaccatccagactaacgtcagctacaacatc
acacgcaagatccaccaggtgcacagtcaggtgactctcctgctgccgcagctgctcacc
atccgctgcgaggcccgcaacgagagaggagctcgagcccgagacatcagactggtcaac
agcacgctgttttctcaggtggccgttctggccgcagtcttagcgctggtggtcatcgcc
attatctccatcatcatcctcatcgctgtgtggaggaagaagccgcgctatgaaatcagg
tggaaggtgatcgaatcggtcagtttggatggacacgagtacatctacgtcgaccccatt
cacctgccctatgacctggcctgggagatgccgcgggacggtctggtgctgggtcggaca
cttggatctggagcgtttgggcgtgttgttgaggcgacggcgtacggtctcggccgttcc
caatccgccactaaagtggcagtgaaaatgctgaaatcgacggctcggaggagcgagact
caagctctgatgtctgaactcaagatcatgagtcatctgggtcctcacctcaacatcgtc
aacatgctgggcgcctgcaccaaacacggtccgctgtatctggtgacagaatactgtcgc
tttggagatctggttgactatctgcacaggaacaagcacagcttcctccagtactacgcc
gacaagaaccacatcgccaacggcagccagatctgtaacgacagcgatgtgccgaccggg
aaagaatacgtgtcgtttggcagcgagcgtgatgggggatatatggacatgaccaaagac
gagcagaccgaatacgtgccgatgcaggagctcatggacaccatcaagtacgcagatatc
cagccatcaccctacgagtctccttaccagcaagacatctaccaggagcaaggtcacagg
gtggatcggtctctggtcatcagtgattctccgcttctgagctacactgatctcgtgggt
ttcagttatcaggtggccaaaggcatggagttcttggcctcaaagaattgtgtgcatcgg
gatctggcagcaagaaacgtcttgatctgtgagggcaaactggccaagatctgtgacttt
ggactggccagagacatcatgcatgacaacaactacatctccaaaggcagcacgtttctt
cctctgaagtggatggcgccggagagcatctttcataacctgtacaccacgctgagtgac
gtctggtcctacggcatcttactgtgggagattttcactctgggaggaaccccgtatcca
gacctgcccatgaacgagttgttttacagcgctctgaagagaggataccgcatggccaaa
ccctcgtatgcctccgacgacatttatgaggtcatgaggaaatgttgggatgagaagttt
gagaagcgtcccgagttctcctttctggtgcacaccatggggaacatgctgtcagacggc
tataaaaagaaatactctcaggtcagcgacagctttctgaagagcgatcaccctgcggtg
gcccgtgtgaagccgcatgtcccgtctccgttcccgaacgccttccctcttcagtctcca
tcctcagatctgagcccaaacccggccccacgcccgcaggctgacggagagctgcacaac
gagtacatcatccccatccccgatcccagaccagaggaggagacccaggacgggccggtg
ctgatggaaatcccctcgagctcgttaggttctgatgaggagacggtctccatggaaacc
ccgagcaccgaacccgagcacgaggagctgctgccagatcattctagaagtccagaggtg
gaggagagcttcctgtga
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integrated database retrieval system
