Sinocyclocheilus grahami (golden-line barbel): 107588322
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Entry
107588322 CDS
T04918
Name
(RefSeq) platelet-derived growth factor receptor beta-like
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04510
Focal adhesion
sgh04540
Gap junction
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107588322
04020 Calcium signaling pathway
107588322
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107588322
04540 Gap junction
107588322
09142 Cell motility
04810 Regulation of actin cytoskeleton
107588322
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sgh01001
]
107588322
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sgh04090
]
107588322
Enzymes [BR:
sgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
107588322
Protein kinases [BR:
sgh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
107588322
CD molecules [BR:
sgh04090
]
Proteins
107588322
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
Ig_VEGFR-1-like_5th
VEGFR-1-like_Ig-like
C2-set_3
RIFIN
Motif
Other DBs
NCBI-GeneID:
107588322
NCBI-ProteinID:
XP_016131861
UniProt:
A0A672SW26
LinkDB
All DBs
Position
Unknown
AA seq
1065 aa
AA seq
DB search
MKSFSRSRLTAMTTGLLLLCLGSSGLELNPSVSQVILSINSSFSITCSGWNYVTWRFKRE
ENVPEFHVEKPSSSSSVLSLEQVMWRHTGVYVCSENGTDETREVAVFVPDPEVWFLENDH
LMVTKTREEGTIPCLVTNPSINVTLYESDSEIMVEGSYNPSVGFSAALEDRTYKCKGELN
GEEKESVSFYVFSIFAPEALDPYINASKTVLKQGETLNVNCTIHGVELVFFSWDFPHKDV
GDIEPLTDVLSFMSMRSCLNITDVSLARSGQYVCHVQEGVLNQRASASINITVLEKGFVA
LSSHLGRNVSALLGENVELKVEIEAYPKPSVQWTKDGAAIRGHSTRQEQETGFVSTLTVV
RIRLEQMGLYTVSVQNQDDFKEMTFDLEVKVPPQITELSDHQLPGKKHAVTCVAEGVPSP
SIQWFSCDSMPKCNNRSVAWSPLVEDPEKVTIQTNVSYNITRKIHQVHSQVTLLLPQLLT
IRCEARNERGARARDIRLVNSTLFSQVAVLAAVLALVVIAIISIIILIAVWRKKPRYEIR
WKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDGLVLGRTLGSGAFGRVVEATAYGLGRS
QSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNMLGACTKHGPLYLVTEYCR
FGDLVDYLHRNKHSFLQYYADKNHIANGSQICNDSDVPTGKEYVSFGSERDGGYMDMTKD
EQTEYVPMQELMDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPLLSYTDLVG
FSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGSTFL
PLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMAK
PSYASDDIYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKKYSQVSDSFLKSDHPAV
ARVKPHVPSPFPNAFPLQSPSSDLSPNPAPRPQADGELHNEYIIPIPDPRPEEETQDGPV
LMEIPSSSLGSDEETVSMETPSTEPEHEELLPDHSRSPEVEESFL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcagccggtcccgactgactgccatgacaacaggtttgctcctgctctgt
ctaggtagctcaggtctggagctcaatcccagcgtctctcaggtcatcctctccatcaac
tcctccttcagcatcacctgctccggctggaattacgtcacctggcgcttcaaacgggag
gagaatgttccggagttccacgtcgagaagccaagttcgtcctccagcgttctcagtctg
gagcaggtgatgtggagacacacgggcgtttatgtgtgttcggagaacgggacagacgag
accagagaggtggccgtctttgtgcctgatcctgaggtgtggttcctggagaacgatcat
ttaatggtgactaagacgagagaagaaggcacgatcccatgtctggtgacaaatccctcg
ataaatgtcacgctgtacgagagtgactcagagataatggtggagggttcgtacaacccc
agcgtgggcttcagcgccgccctggaggacagaacctacaaatgcaaaggagagctaaac
ggagaggagaaagagtccgtcagcttctatgtcttcagtatatttgctcccgaggctctg
gatccctacatcaacgcctccaaaacggtcctgaaacagggcgagacactgaacgtcaac
tgcaccattcacggcgtggaactcgtcttcttctcctgggactttccccacaaagacgtg
ggggacattgagcccttgactgacgtcctgtcgttcatgagcatgcggtcctgtctcaac
atcacagacgtgtctctggccagatcaggacagtatgtttgtcacgtgcaagagggtgtg
ctgaaccagagagcttcagccagtattaacatcactgtactggagaaaggcttcgtggct
ctttcttcacatctgggcaggaacgtctcggcactgctcggagaaaacgtggagctgaag
gtggagattgaggcgtatcccaaacctagcgtgcagtggactaaagacggcgctgctatc
agaggacacagcaccagacaggaacaagagacggggtttgtcagcacactgaccgtggtc
aggatccgactggagcagatgggtctctacaccgtcagtgtccaaaaccaagatgacttt
aaagagatgacctttgacctagaggtgaaagttcctcctcagataactgaactctctgac
catcagctgccgggtaagaagcatgcggtcacctgtgtggcggagggagtgccgtctccc
agcattcaatggttcagctgtgacagcatgcccaagtgcaataacagaagtgtggcgtgg
agccccctagtggaggatcctgagaaagtcaccatccagactaacgtcagctacaacatc
acacgcaagatccaccaggtgcacagtcaggtgactctcctgctgccgcagctgctcacc
atccgctgcgaggcccgcaacgagagaggagctcgagcccgagacatcagactggtcaac
agcacgctgttttctcaggtggccgttctggccgcagtcttagcgctggtggtcatcgcc
attatctccatcatcatcctcatcgctgtgtggaggaagaagccgcgctatgaaatcagg
tggaaggtgatcgaatcggtcagtttggatggacacgagtacatctacgtcgaccccatt
cacctgccctatgacctggcctgggagatgccgcgggacggtctggtgctgggtcggaca
cttggatctggagcgtttgggcgtgttgttgaggcgacggcgtacggtctcggccgttcc
caatccgccactaaagtggcagtgaaaatgctgaaatcgacggctcggaggagcgagact
caagctctgatgtctgaactcaagatcatgagtcatctgggtcctcacctcaacatcgtc
aacatgctgggcgcctgcaccaaacacggtccgctgtatctggtgacagaatactgtcgc
tttggagatctggttgactatctgcacaggaacaagcacagcttcctccagtactacgcc
gacaagaaccacatcgccaacggcagccagatctgtaacgacagcgatgtgccgaccggg
aaagaatacgtgtcgtttggcagcgagcgtgatgggggatatatggacatgaccaaagac
gagcagaccgaatacgtgccgatgcaggagctcatggacaccatcaagtacgcagatatc
cagccatcaccctacgagtctccttaccagcaagacatctaccaggagcaaggtcacagg
gtggatcggtctctggtcatcagtgattctccgcttctgagctacactgatctcgtgggt
ttcagttatcaggtggccaaaggcatggagttcttggcctcaaagaattgtgtgcatcgg
gatctggcagcaagaaacgtcttgatctgtgagggcaaactggccaagatctgtgacttt
ggactggccagagacatcatgcatgacaacaactacatctccaaaggcagcacgtttctt
cctctgaagtggatggcgccggagagcatctttcataacctgtacaccacgctgagtgac
gtctggtcctacggcatcttactgtgggagattttcactctgggaggaaccccgtatcca
gacctgcccatgaacgagttgttttacagcgctctgaagagaggataccgcatggccaaa
ccctcgtatgcctccgacgacatttatgaggtcatgaggaaatgttgggatgagaagttt
gagaagcgtcccgagttctcctttctggtgcacaccatggggaacatgctgtcagacggc
tataaaaagaaatactctcaggtcagcgacagctttctgaagagcgatcaccctgcggtg
gcccgtgtgaagccgcatgtcccgtctccgttcccgaacgccttccctcttcagtctcca
tcctcagatctgagcccaaacccggccccacgcccgcaggctgacggagagctgcacaac
gagtacatcatccccatccccgatcccagaccagaggaggagacccaggacgggccggtg
ctgatggaaatcccctcgagctcgttaggttctgatgaggagacggtctccatggaaacc
ccgagcaccgaacccgagcacgaggagctgctgccagatcattctagaagtccagaggtg
gaggagagcttcctgtga
DBGET
integrated database retrieval system
