Sinocyclocheilus grahami (golden-line barbel): 107588325
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Entry
107588325 CDS
T04918
Name
(RefSeq) lysine-specific demethylase 2A-like
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107588325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107588325
04121 Ubiquitin system [BR:
sgh04121
]
107588325
03036 Chromosome and associated proteins [BR:
sgh03036
]
107588325
Enzymes [BR:
sgh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107588325
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107588325
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107588325
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107588325
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107588325
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
JHD
F-box-like
JmjC
F-box
Cupin_8
LRR_6
PHD
LRR_4
Rubredoxin
Motif
Other DBs
NCBI-GeneID:
107588325
NCBI-ProteinID:
XP_016131866
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MPDPDFSVSDVKLFVGSRRMVDVMDVNTQKGIEMSMGQWRRYYETPPSEREKLYNVISLE
FSHTKLEHLVKRPTSVDMIDWVDNMWPRHLKESQRDSTNAIIEMQYPKVQKYCLMSVEGC
FTDFHIDFGGTSVWYHILRGRKVFWLIPPTPQNLELYENWVLSGKQGDIFLGDKATMCQR
IELKQGYTFMIPSGWIHAVYTPMDTLVFGGNFLHSFNIPMQLNVYNIEDRTRVPAKFRYP
FYFEMCWYVLERYLYCLTNISHLTPEFQKHSLGIGLKKEDVIKQGGFNGQEENIVEEEEE
MVKEEPEEEAASPARPGVKVHLTPLELEGLWELLHKLEELPAHKKCVPAGIRNAPALLSD
IRKLLEEHANDNPKLSYTGKPIVKWPKRPSWYEPPPLPLSLLYRPRAPGSAPVLPLVPRP
VKPSSSISALRRRRVRCKRCEACLRTECGDCNYCRDMRKFGGPGRLKKSCVLRQCLAPAL
PLTAVCAICKEGYLESIDSESVQTLMECSECAQITHPECIKVHVPGEGIINKDLPSCWEC
PKCVQGKKTESSSSSEEETDSSVSNGSRLSGPPAKRAYREGIGVGGLRIGRKGRPPLSLS
SPPLTRSRRQPPPSQRLLLQHQQNRRRAGALELQLRKRIKLERNKILQSTRSSVSLSPKL
LRQRSLERGGVVRAGPRRSISRGRGMSSCRGRGVRLRGGGQGGGLRERMEMGVERDDSVE
EEQEERKENGQYNGKENRPQKRGGQAGEDENGESHRNGESEGSSEGGEATPSDTSMVLND
DVGGQGSCVTVTLQPSRGRRDPSAIVPKLEANLSSRSLPQNHKALLRPPLRNGAPRSDSP
HSPADRLHVNKSHALSSSPHTLTRSASKHSHMVRSLRSNFKDSPHRLTRERIGKKTRSEK
AKSSDSCPSSTLRPSAEQNGGNEPGWEREVWVSVFRYLTRAELCVCMAVCKSWYKWGCDK
RLWTRISLSRCRSISPQALTGIIKRQPVTLDLSWANISKKQLSWLINRLPGLKDLVLSGC
NWASVSALSSPSCPLLRSLDLSCADGVKDAQIRELLNPPGSDNRSQMKNMQCLWLCSLEV
TEATLRLIIRHMPLLTRLELSHCPITDGALNLLSAVGSSTRNTLTHLNLAGCSRLTDRCL
VYLRRLSCLSVLDLRGCKGVSRQACESFISELSVNALYCLSDDKLVQRIS
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacccagactttagtgtcagtgatgtgaaattgtttgtgggcagtcgcaggatg
gttgatgtgatggatgtgaacactcaaaaaggcattgagatgtcaatggggcagtggagg
agatactacgagacgccgccttctgaacgtgaaaaactctacaatgtgatcagcctggag
ttcagtcacacaaaactagaacatctagtcaagagacctacctcggttgatatgattgac
tgggtggacaacatgtggccacggcatcttaaagaaagtcagcgagactccaccaatgcc
attatagaaatgcagtaccctaaagtacagaagtattgtctgatgagtgtcgagggatgc
ttcacagatttccacatagactttggcggcacatcagtctggtatcacatcctcagggga
aggaaggtgttctggctgatcccgcccacacctcagaacctggagctctatgagaactgg
gtgttgtcagggaaacagggtgacatctttctcggcgataaagccacgatgtgccaacgg
attgaactgaagcaaggctacacattcatgatcccctcagggtggatccatgcagtttac
actccaatggatactctggtgtttgggggaaactttctgcacagctttaacattcccatg
cagcttaacgtttacaacattgaggaccgcacacgggtccctgctaagttccgctaccct
ttctactttgagatgtgctggtatgtgttggagcgttacttgtactgtctgaccaacata
tctcacctcacacctgagttccagaagcactcactgggcattgggctaaagaaggaggat
gtgattaaacaaggaggctttaatggtcaagaagaaaatatagtggaagaggaggaggag
atggtgaaggaggagccggaggaagaggcagcatctcctgctcgtccaggggtgaaagtt
cacctgacacccttagagctggaagggctttgggaattactgcacaagttggaggaattg
ccagcacacaagaaatgtgttccagcaggcatcagaaatgccccagcactactcagtgac
atacggaagctgctagaggaacatgccaatgataaccccaaactgtcttacactggaaaa
ccaatcgtcaaatggcccaaaaggccctcgtggtatgagccgccgccgctgcctctgtct
ctgctgtaccgcccgcgtgctcccggctcagcccccgtgttgccgctggtacctcgaccc
gtgaagccgtcttcctccatctcggctctgagacgcagacgtgtgcgatgcaaacgctgc
gaggcctgtctgcgcaccgagtgtggcgactgcaactactgtagggacatgaggaagttt
ggaggaccgggcagactcaagaagagctgtgttctccgtcagtgtcttgcaccggcgcta
cctcttactgcagtatgtgccatatgtaaggaaggctatctggagtctatagactcagag
tccgtccaaacgctcatggaatgctccgaatgcgctcagatcactcatccagaatgtata
aaggtacatgtgcccggtgagggtattattaataaggaccttcccagttgttgggaatgt
ccaaaatgtgtccagggcaagaaaacagagtcttccagtagtagtgaggaggagacagac
agcagcgtgtccaacggcagtcgcttgtctggtcctccagctaagcgggcatacagagag
gggattggggtggggggtctgcgtatagggcgcaaaggtcgcccgcccctctccctctcc
tccccgcctctgacccgctccagacgacagccgcccccttcccagagactcctgctgcag
caccaacagaacaggaggagagcgggagcgctggagttacagctcaggaaaaggataaaa
ttagaaaggaataaaatcctccagtcgacccgttcgtctgtctctctttctccaaagctc
ctgcgtcagcggagtctggagagagggggtgtagtcagagcgggtcccagacggagcatt
tcccgtggccgagggatgtcctcctgtcgcggaagaggggtacgactccgaggcggtggc
caagggggaggcctgagagaaagaatggagatgggggttgaaagagatgactctgtggaa
gaagaacaggaggagaggaaagagaacggacagtataatggtaaagagaaccgtcctcag
aaacgagggggtcaagctggtgaagacgagaacggagaaagccatcgaaacggagagagc
gaggggagcagtgagggaggagaggccactccatctgacacttctatggtgctaaatgat
gatgtcggaggccaggggtcctgcgtcacagtgacattacagccatcgaggggtaggcgc
gaccctagcgccattgttcccaaactggaagccaacttgtcttctagaagccttccacaa
aaccacaaagccctgctccgtcccccactgcgaaacggtgcccctcgctcagacagtcct
cattcgcctgcagacagattgcacgtaaacaaatcacatgctctttcatcatcaccgcac
actctgaccagaagtgcatccaaacactcacacatggtgcggagtctgagatcaaacttt
aaagattcccctcaccggctgactcgagagagaattgggaaaaagactcgatcggaaaag
gcgaaatcctccgactcttgtcccagttccactttgcggccctcagcggagcagaacgga
gggaacgagccaggctgggagagagaggtttgggtgtccgtgttccgctacttgactcgt
gcagagctgtgcgtttgcatggctgtttgcaagagttggtacaaatggggctgtgacaag
cgtttatggacgcggatcagtctgagccgctgccgctctataagtcctcaggccctcacg
ggcatcatcaaacggcagcctgtcacactggacctctcctgggccaacatctccaagaag
cagctcagctggctcatcaaccgcctgccaggccttaaagacctggtgctatcagggtgt
aattgggcgtcagtctcagcactgagctctccaagctgtcctttactgcgctctttagac
ctgagctgcgccgatggcgtcaaagatgcacaaatcagggagctactgaacccaccaggc
agtgacaaccgttcccagatgaagaacatgcagtgcttgtggctgtgcagtctggaggtg
accgaagccacgctgaggctgatcatcagacacatgcctctgctcactcgtctggagctc
tcgcattgtcccatcacagatggtgctctcaacctcctcagcgccgtgggctcctccaca
cgcaacacactcacacacctcaacttagcaggttgcagccgcctgacagaccggtgtctg
gtgtacctgcggcgcttgtcctgtctctccgtactggacctgcgcggctgcaaaggggtc
tcgcggcaggcgtgcgaaagctttatctccgagctgtctgtcaatgccctctactgccta
tcagatgacaagctcgtccagaggatatcgtaa
DBGET
integrated database retrieval system