Sinocyclocheilus grahami (golden-line barbel): 107589041
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Entry
107589041 CDS
T04918
Name
(RefSeq) voltage-dependent L-type calcium channel subunit alpha-1C-like
KO
K04850
voltage-dependent calcium channel L type alpha-1C
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04010
MAPK signaling pathway
sgh04020
Calcium signaling pathway
sgh04260
Cardiac muscle contraction
sgh04261
Adrenergic signaling in cardiomyocytes
sgh04270
Vascular smooth muscle contraction
sgh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
107589041
04020 Calcium signaling pathway
107589041
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
107589041
09153 Circulatory system
04260 Cardiac muscle contraction
107589041
04261 Adrenergic signaling in cardiomyocytes
107589041
04270 Vascular smooth muscle contraction
107589041
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107589041
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
107589041
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Motif
Other DBs
NCBI-GeneID:
107589041
NCBI-ProteinID:
XP_016132831
LinkDB
All DBs
Position
Unknown
AA seq
1835 aa
AA seq
DB search
MVNESKNMYIPEDTLENHQGSNYSSPSLAPVPSLNEDEHVGDGGGVLGLAPEHIPTPGAP
LNWQAAINAARQAKLMGTTAAPICTASSTQRKRQHYTKPKKQASTASTRPPRALLCLTLK
NPIRRACISIVEWKPFEIIILMTIFANCVALAVYIPFPEDDSNATNSNLERVEYLFLIIF
TVEAFLKVIAYGLLCHPNAYLRNGWNLLDFIIVVVGLFSAILEQATKGDGGTSMGGKAAG
FDVKALRAFRVLRPLRLVSGVPSLQVVLNSIIKAMVPLLHIALLVLFVIIIYAIIGLELF
MGKMHRTCFFFKDGHKGTISEEKPAPCAPSSTHGRHCSPTNITQCMMGWAGPNDGITNFD
NFAFAMLTVFQCITMEGWTDVLYWMQDAMGYELPWVYFVSLVIFGSFFVLNLVLGVLRTE
FSKEREKAKARGDFQKLREKQQLEEDLKGYLDWITQAEDIDPENDDEGLDDDKPRNLSIP
ASENESVNTDNAPAGDMEGETCCTRMANRISKSKFSRYSRRWNRLCRRTCRAAVKSNVFY
WLVIFLVFLNTLTIASEHHQQPDWLTNVQDIANKVMLALFTGEMLLKMYSLGLQAYFVSL
FNRFDSFVVCGGILETILVETKIMSPLGISVLRCVRLLRIFKITRYWNSLSNLVASLLNS
VRSIASLLLLLFLFIIIFSLLGMQLFGGKFNFDETRRSTFDNFPQSLLTVFQILTGEDWN
SVMFDGIMAYGGPSFPGMLVCIYFIILFICGNYILLNVFLAIAVDNLADAESLTSAQKEE
EEEKERKKLARTASPEKRQNSEKPPLEDEKKEEKIELKSITSDGETPTATKINIDEYTGE
ENEEKNPYPVNDFPAAAEDDEEPEMPVGPRPRPLSDIQLKEKAVPMPEARAFFIFSPDNK
FRVLCHKIVNHNIFTNLILFFILLSSISLAAEDPVNNDSFRNQILGYADYVFTGIFTIEI
ILKMTTYGAFLHKGSFCRNYFNILDLVVVSVSLISSGVQSSAINVVKILRVLRVLRPLRA
INRAKGLKHVVQCVFVAIRTIGNIVIVTTLLQFMFACIGVQLFKGKFFYCTDTSKQTQSE
CRGSYILFKDGNVGKPVKSQRSWENSDFNFDDVLQGMMALFAVSTFEGWPGLLYRAIDSH
AEDVGPVYNYRVIISIFFIIYIIIIAFFMMNIFVGFVIVTFQEQGEQEYKNCELDKNQRQ
CVEYALKARPLRRYIPKNPYQYKVWYVVNSTYFEYLMFTLILLNTICLAMQHHGQSQSFS
KAMNILNMLFTGLFTVEMILKLIAFKPRHYFVDAWNTFDALIVVGSVVDIAITEVNPADP
SSSPPSSVVRPMGLQNTEDNARISITFFRLFRVMRLVKLLSRGEGIRTLLWTFIKSFQAL
PYVALLIVMLFFIYAVIGMQMFGKIALRDNSQINRNNNFQTFPQAVLLLFRCATGEAWQE
IMLACSPNRPCEKGSEVNHNSEDCGSHFAIIYFVSFYMLCAFLIINLFVAVIMDNFDYLT
RDWSILGPHHLDEFKRIWAEYDPEAKGRIKHLDVVTLLRRIQPPLGFGKLCPHRVACKRL
VSMNMPLNSDGTVMFNATLFALVRTALRIKTEGNLEQANEELRAIVKKIWKRTSMKLLDQ
VVPPAGDDEVTVGKFYATFLIQEYFRKFKKRKEQGLVSKIPPKTALSLQAGLRTLHDMGP
EIRRAISGDLTVEEELERAMKETVCSASEDDIFRRSGGLFGNHVDYYHQSDGHASFPQSF
TTQRPLHISKSGSPGEAESPSHQKLVDSTFTPSSYSSSGSNANINNANNTAIGHRYPKPT
VSTVDGHTGPPLTTVPLPRPTWCFPNKRYDDICFL
NT seq
5508 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgaaagcaaaaacatgtacataccggaggacacccttgaaaaccatcaaggc
tccaactattccagtccgtcgttggctccagtccccagtctgaatgaggacgagcatgtg
ggggacgggggtggggtgctgggtcttgcacctgaacacattcccacccctggtgccccc
ctcaactggcaggcagccatcaacgcggcacggcaggccaagctgatgggcaccaccgca
gccccgatctgcactgcgagctccacacagcgcaaacgccagcactacaccaaacccaag
aaacaggccagcactgcctccacgcgcccaccccgagcccttctctgcctcactcttaaa
aaccctatccgcagggcgtgcatcagtattgtggaatggaaaccgtttgaaatcataatt
ttgatgactatttttgcaaactgtgtggccttagctgtctacatccctttcccagaggac
gattccaacgcaaccaactcaaacctggaacgggtggagtatctctttctgatcattttt
acggtggaagcatttctcaaagttattgcatacgggttgctgtgtcaccctaatgcgtac
ctgcggaacggctggaacttgttggatttcatcatcgtggtggtagggctgttcagtgca
atattagagcaggccactaaaggggatggtgggacttcaatgggaggcaaggctgcaggg
tttgatgtaaaagccctgcgagcctttagagtgttgagacctctgagactcgtatctgga
gtacctagtttacaggtggtgctgaactccatcattaaagccatggttcccctcctgcac
atcgctctgctcgttctgttcgtcatcatcatttatgccatcatcggcctcgagctcttc
atgggcaagatgcacagaacctgttttttcttcaaagatggacacaaaggtactatatct
gaagagaagccggccccctgcgccccaagctccacccatggacgacactgctccccgacc
aacataacgcagtgcatgatgggatgggcaggcccaaatgatggaatcacgaactttgat
aactttgcatttgccatgctgactgtgtttcaatgcatcacgatggagggctggactgac
gtcctgtactggatgcaggatgccatgggttatgagcttccatgggtctattttgtcagt
ctggtcatctttggatcctttttcgttctaaatttggttctgggtgtgttgagaacagag
ttctctaaagagcgagaaaaggccaaagctcgcggtgatttccagaagctccgtgagaag
cagcagctggaggaggatctaaagggctacctggactggatcactcaggcggaggacatc
gaccctgagaacgacgacgagggactggatgacgacaagcctagaaatctgagtataccg
gccagtgaaaatgagtcagtgaacactgataatgctcccgctggagacatggagggagag
acctgctgtactcgcatggcaaataggatctccaaatccaaattcagtcgatattcacgc
cgatggaatcggttatgtcggcgcacgtgccgtgcagcagtgaagtcaaatgtgttctac
tggctggtgattttcctggtatttttgaacacgcttaccattgcctctgagcaccaccag
cagccagactggctcaccaatgtacaagatatcgccaataaggtgatgctggctcttttt
accggtgagatgctgctgaagatgtacagcctgggcctacaggcctatttcgtctccctt
tttaaccgcttcgacagttttgtggtgtgcggtggaattctggagactatcctggtagag
actaagatcatgtcgcccctcggcatctctgtgctgcgctgtgtgcgtctgctccgcatc
ttcaagatcaccaggtactggaactctctcagtaatctagtggcgtctctgctgaactcg
gtgcgctctatcgcgtccctgcttctgctactcttcctgttcatcatcatcttcagtctg
ctcggaatgcagctctttggtggcaagttcaactttgacgagacgcgccgcagcaccttc
gataacttcccccagtctctcctcaccgtctttcagattttgaccggagaggactggaac
tctgtgatgtttgatgggatcatggcgtacggtgggccctcctttcctggcatgcttgtc
tgcatttatttcatcatcctcttcatctgcggaaactacatcctcctgaatgtcttcttg
gccattgccgtggacaacctggcagacgcagagagtctgacatcagcgcagaaagaggaa
gaggaggagaaagagaggaagaagctggccagaacggccagtccagagaagcgccagaac
tctgagaaaccacctctggaggatgaaaagaaagaggaaaagattgaactaaaatccatc
acttctgatggagagacaccaactgctaccaagatcaacatagatgagtacacaggggag
gagaatgaggagaagaacccatatcctgtgaacgatttcccagcagcagcggaggacgat
gaggagccagagatgccagtaggtcctcgtccacgtccactctccgacattcagctgaag
gagaaagctgtccccatgccagaagccagagctttctttattttcagccccgataacaag
ttcagggttttgtgtcataagattgtaaaccacaacatcttcaccaatttaatcctgttc
tttatactgctgagcagtatttcactggcagcggaggacccagtgaataatgactcattc
aggaatcagattctaggctatgcagattatgtgtttacaggaatcttcaccatagagatc
atactgaagatgacaacgtatggagcattcctacataagggttcattttgtcggaattat
tttaatattttggatctggtggtggtcagtgtgtctctgatctcctctggagttcagtca
agtgccattaatgtagtgaagattctcagagtgctgagggtgttgaggcccctgagagca
atcaacagagccaagggcctcaaacatgtggtccagtgtgtgtttgtagccatccgtacc
atcgggaacatcgttatcgtcaccactttgctgcagttcatgtttgcctgtattggtgtt
caacttttcaagggcaaattcttctactgcacagacacctctaaacagacacagtccgaa
tgcagggggtcctatatattattcaaagatgggaatgttgggaagccagtgaaatcacag
cgttcatgggagaacagtgacttcaactttgatgatgtcctgcagggcatgatggctctg
tttgccgtgtccacttttgagggttggccagggctcctctacagagccattgactcccat
gcagaggatgttggtccagtctacaactaccgtgtgatcatctctatatttttcatcatc
tacatcatcatcattgccttcttcatgatgaacatattcgtaggtttcgtcattgtgaca
tttcaggagcagggagagcaagagtacaaaaactgtgagctggacaagaaccagcgtcag
tgtgtggaatatgccctgaaggctcgtcccctgcgcaggtacatccccaagaacccgtat
cagtacaaggtatggtacgtggtgaactctacctactttgagtacctgatgttcaccctc
attcttctcaacaccatctgcctggccatgcagcatcatggccaatctcaatcgttcagc
aaagccatgaatatcctcaatatgttgttcaccggcctattcactgtggaaatgatcctc
aaactcatcgccttcaaacccaggcattattttgttgatgcatggaacacatttgatgcc
cttattgtagtgggtagtgttgttgatatagccatcacggaggttaacccagctgacccc
tcctcctctcccccctcttctgtggtaagaccaatgggcctccaaaacactgaagataat
gccaggatctcaatcacgttctttcggctgttccgtgtgatgaggctggtgaagctcctg
tctcggggagagggcattcggacgctgctctggaccttcattaaatcctttcaggctctt
ccctatgttgctttgctgatcgtaatgctgttcttcatctacgccgtcattgggatgcag
atgttcggtaagattgccctgagggacaacagccagatcaaccgaaacaacaactttcag
acgtttcctcaggctgttctgctgctcttcaggtgtgcaacaggggaggcgtggcaggaa
atcatgctggcctgttctccgaaccgcccgtgtgagaaggggtcagaggtcaaccacaac
agtgaagactgtggcagccactttgccatcatctactttgttagcttttatatgctttgc
gccttcctgatcattaacctctttgtggccgtcatcatggacaactttgactatttaaca
cgtgattggtcgatattggggccgcatcacctggatgagtttaagaggatatgggcagaa
tacgatcctgaggccaagggtcggataaagcacctggatgtggtgacgttgctgcgcagg
attcagcctccccttggatttggaaagctttgtccacatagagtggcgtgcaagcggctt
gtgtccatgaacatgcctctcaatagtgacgggacggtgatgttcaacgcaactctcttt
gctctggtacgaacggctctacgcatcaaaactgaaggtaacctggagcaagcaaatgag
gaactccgggccatcgtgaagaagatctggaagaggacgagcatgaagctgctggatcaa
gtcgttccccctgctggagatgatgaagtaacagtggggaagttctatgccacatttctg
attcaggaatacttcaggaaatttaagaagcgcaaggaacagggcctggtgtccaaaatt
cctccaaagacggctctttcactgcaggctggcctgcgtacactgcatgatatgggtcct
gagattagaagagcgatatcaggagacctgactgtggaggaggagctggagagagccatg
aaggaaaccgtgtgttctgcatctgaggatgatatcttcaggcggtctggcggtctcttc
ggtaaccacgtcgactactaccaccagagtgacggccacgcctccttcccacagtccttc
acaacacagcggccgttgcacatcagtaaatccgggagtcccggcgaagcagaatctccg
tctcatcagaagctcgtcgactccaccttcactccgagcagttattcttcctcgggatcc
aacgcaaacattaacaacgccaacaacacagccatcggacaccggtaccccaaacctacc
gtcagcacagtggacggacacacggggccgcccctcaccaccgtcccactaccacggccc
acatggtgctttcctaacaagaggtatgatgacatatgctttctgtag
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