Sinocyclocheilus grahami (golden-line barbel): 107590705
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Entry
107590705 CDS
T04918
Name
(RefSeq) Smith-Magenis syndrome chromosomal region candidate gene 8-B protein homolog
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107590705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107590705
Membrane trafficking [BR:
sgh04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
107590705
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
UPF0181
Motif
Other DBs
NCBI-GeneID:
107590705
NCBI-ProteinID:
XP_016135096
LinkDB
All DBs
Position
Unknown
AA seq
554 aa
AA seq
DB search
MISSPDLVAFTKETYFSEIAKDPSALPEELSVPMYPYTGDTTPWSTMSGANFKKDFILLS
EFSEQVGPQPLLTVPPETKACGTFDLNHFSLRIMSVDYQTSLTSLAGCGSLKLNFVEDSK
VVLGDSGEGAFAYVHHLMLYDLEARGFVRPLCLAYVSSEENKIIQQFQQLSAEFSKVSEC
LKTGNRKNFANELEIKLRDLEYTRVMLLREIEKELNNASFSRKAEVECEKGNRSCITHDR
DERIGERRKSKQDKRSCPMPLANKGEELACVEKSIQEHKSLLKQISCYPTRKLRDSEYSP
YEPDDLPHSFEFDLDDLRHGQLAGPMLEYNVFSCTNTPSHSLQLISSTSSCQFDKRLKTL
EELCDDYFHHQALQQLYSIERTFRGDACHLYSQQLCHNHLRNLKSTNFLFEDPCDLEEEA
GLQIGIAGQHSVRQPSFLPAPSILSEPASLESYVSCVEMVPIKLELGGPSQFPAVPSSLN
TPSEDNLRLTSDTSLVETEMENGGVVSTSDCLENVEYVSALMKTSISSGDSIEVLGTEKS
FRSQGSNIPLDTAL
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgattagctctccagacttggtggctttcactaaagaaacatatttcagtgaaatagcc
aaagacccctcagcacttcctgaggaactgtctgttcccatgtatccctacactggggac
accaccccatggtccacgatgtctggtgctaattttaagaaggactttatccttttatca
gagttttcagagcaagttgggccacagcctttgcttacagttcctcctgaaaccaaggct
tgtggaacgtttgatttgaaccacttctcccttcggatcatgtcagtggactatcagacc
tcactcaccagcctggcaggttgtggctctttgaaactgaactttgtagaagactcaaaa
gtagttttaggggattctggagaaggagcatttgcatatgtgcaccaccttatgctctat
gacttggaggctcgagggtttgtgcgacctctctgccttgcctacgtgtcgtctgaggag
aataaaattatacagcaatttcagcagctttccgcagagttctccaaagtctctgaatgc
ctaaaaacagggaacaggaagaactttgcaaatgaactggagataaaactgagagatttg
gagtataccagagtcatgttacttagagaaatagaaaaagaattgaataatgcatctttt
tcaagaaaggcagaagtagagtgtgaaaaagggaataggtcatgtattacacatgataga
gatgaacgaattggagagcgaaggaagagcaagcaagacaaaagatcttgcccaatgcca
ttggctaacaaaggtgaggaactggcctgtgtagaaaaatccattcaggaacacaaaagc
cttctaaaacagatttcctgctacccaaccaggaagcttagagactctgaatactctcct
tatgaaccagatgacctccctcattcttttgagttcgacctggatgatttaaggcatggt
cagcttgctgggccaatgctagaatataatgttttttcttgcacaaacacaccctcacat
tctctgcagctgattagctctacttcatcttgccaatttgacaagcgtcttaaaactctc
gaggagttgtgtgatgactacttccaccatcaggcgctacagcaactgtactccattgag
aggacattcagaggagatgcctgccatctctactcacaacaactctgccataatcatctt
cgcaacctcaaatctaccaatttcttatttgaggatccatgtgacttggaagaggaagcg
ggattacagattggaatagccggtcaacattcagtccgacaaccctcatttcttcctgca
ccttcaattctaagtgaacctgccagtctcgagtcatatgtctcttgtgttgaaatggtg
ccaatcaaactagagttgggtggacctagtcaatttccagctgtacccagctctttaaat
accccttccgaggataacctacgccttacatccgacacctccttagtagagactgaaatg
gaaaatgggggggttgtttcaacttcggattgcctagaaaatgtggaatatgtttcagct
ttgatgaagactagtattagtagcggagatagtattgaggtcttaggtacagagaagtcc
ttcagatcccagggttcaaatataccattggatacagcactgtaa
DBGET
integrated database retrieval system
