Sinocyclocheilus grahami (golden-line barbel): 107590913
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Entry
107590913 CDS
T04918
Name
(RefSeq) TNF receptor-associated factor 3-like
KO
K03174
TNF receptor-associated factor 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107590913
04621 NOD-like receptor signaling pathway
107590913
04622 RIG-I-like receptor signaling pathway
107590913
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107590913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
zf-TRAF
TRAF3_RING
zf-C3HC4
zf-C3HC4_2
Crescentin
EzrA
ATG16
zf-TRAF_2
zf-RING_6
zf-RING_UBOX
zf-rbx1
Sina_ZnF
CENP-K
zf-RING_4
BLOC1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-GeneID:
107590913
NCBI-ProteinID:
XP_016135352
UniProt:
A0A672QKN3
LinkDB
All DBs
Position
Unknown
AA seq
573 aa
AA seq
DB search
MSAGRNVEQQIALQQRPPSLAMPSMAQRPRPEPGFLPLHGGFRDHFVTTPEAKYRCESCR
LVLCNPRQTECGHRFCENCITDLLSKPNPVCPADLEPLFEDKIFRDVCCNREIMALKIYC
RSEKNGCKEQMILQQVMDHLEVCPYFEVPCPLGKCKEKMMRKDMSEHLNRKCKHREITCE
FCNHKMALTELQKHKDTVCPAFPVACPNHCSFSSILRSELSSHQHDCPKAQVTCSFIRYG
CSFKGLNQEMREHESSFASEHLRMMAVRNTTLEAKVEDVKSELMERYKVLPSLSSRLAEV
ETQYEEMREKNRQLEQKLVSMQMLMSTHSEKLLEVEMELRELRPLRAMREEVEALRGSVE
NMRSIVSSLDSGRVGSSSGSHTLGSLEQQLSRHDDMMSVHDIRLAEMDLKLQVLETASFN
GTLIWKIRDYKRRKQEAVASKTLSLYSQPFYTGYFGYKMCARIYLNGDGMGKGTHLSLFF
VVMLGEYDALLPWPFKQKVTLMLMDQGPARKHLGDAFKPDPNSSSFRRPTGEMNIASGCP
LFVAQTVLENGTYIKDDTIFIKVTVDTSDLPDP
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagggcgtaatgtggaacagcagattgccctgcagcagcgtcctccatctctt
gccatgccctccatggcccagcggcccaggcccgagccaggcttcttgcccctgcatggc
ggatttagggaccactttgtcacgacccctgaggccaagtatcgctgcgagtcttgcagg
cttgtgctctgtaaccctcgacaaactgagtgtggacatcgcttctgcgagaactgcatc
acagacctgctcagtaagcctaacccagtttgtccagctgatctagaaccactctttgaa
gataagatattccgggatgtttgctgcaatagggaaattatggctctgaagatctactgc
cgaagtgagaaaaatggatgtaaagaacaaatgattttacagcaggtcatggaccacttg
gaagtttgtccgtacttcgaggtgccatgccccttgggaaagtgtaaggagaagatgatg
aggaaagacatgtctgagcacttgaaccgcaaatgcaaacacagagagatcacctgtgaa
ttctgcaatcacaagatggccctcaccgagttacagaaacacaaagatacagtctgtcct
gcatttcctgtagcatgccctaatcactgctcgttttcttccattctaagaagtgagctg
tccagtcatcagcatgactgtccaaaggcccaagtgacctgctcctttattcgctacgga
tgctcctttaaggggctgaatcaagagatgagggaacatgagtccagttttgcgtctgag
cacctgagaatgatggcagtcagaaacaccacactagaggccaaggtagaggatgttaag
agcgagctgatggagcgttataaagttctgcccagcctcagcagtcgtcttgcagaggtt
gagactcagtatgaggagatgagagaaaagaacaggcagctggagcagaagctagtcagc
atgcagatgctgatgagcactcactcagagaaactgcttgaggtcgagatggagctgcgg
gagcttcgtccactgcgagctatgagggaggaggtggaggctctgagagggtccgtggag
aacatgcgttcaattgtatcttctctcgattcgggtcgtgttggttccagttctggttct
cacacgctgggctccttagagcagcagctctcacgtcacgatgacatgatgagtgtccat
gacatccgcctggcggagatggacctgaagctgcaggtgctagagacggccagcttcaac
ggtacgctcatttggaagatccgtgactacaaaagacggaaacaggaagccgtggcctca
aaaaccctctcgctctacagccagcccttctacacgggctatttcggctacaagatgtgt
gcccgcatctatctgaatggggacggaatgggtaaaggcacacatctctcgctgttcttc
gtggtcatgcttggggaatacgatgccttgctgccgtggccgttcaaacagaaagtaaca
ttaatgctaatggaccaggggccggcaaggaaacacttaggcgatgccttcaaaccggat
ccaaatagcagtagctttcgccggcccactggtgaaatgaacatcgcctcgggctgccca
ctctttgtggctcaaactgtcctagagaatggaacctacatcaaagacgacaccatcttc
attaaggtgactgtagacacctccgacctcccggacccttga
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