Sinocyclocheilus grahami (golden-line barbel): 107592268
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Entry
107592268 CDS
T04918
Symbol
tpcn1
Name
(RefSeq) two pore calcium channel protein 1 isoform X1
KO
K16896
two pore calcium channel protein 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04020
Calcium signaling pathway
sgh04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
107592268 (tpcn1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
107592268 (tpcn1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sgh04040
]
107592268 (tpcn1)
Ion channels [BR:
sgh04040
]
Voltage-gated cation channels
Calcium channel, two-pore (TPC)
107592268 (tpcn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
YMF19
Motif
Other DBs
NCBI-GeneID:
107592268
NCBI-ProteinID:
XP_016137171
LinkDB
All DBs
Position
Unknown
AA seq
809 aa
AA seq
DB search
MEVSSTFDNMTGLTHDRPVQMSSFCQQFASVDGAGNYDVNNVVIPTPGAPDPRAQNSLRQ
SWEMNYQEAAIYLQEGENNDKFFTHPRNAHALSAYLFAHNHLFYVMELLTAVLLMLLSLS
EAPAVPFLRLDVYVHATLELLVLVMVAFELCMKLRWLGFHTFIRHKRTMVKTCVLFIQFV
EAIVVLVRQTSHLRVTRALRPIFLVDCRYCGAVRRNLRQIFQSLPPFIDILLLLLFFMVI
FAILGFCLFSANSADPYFSTLENSIVSLFVLLTTANFPDVMMPAYSKNRWSCIFFIVYLS
IELYFIMNLLLAVVFDTFNGVEKMKFKSLLLHKRSAVEHGFQLLVSRQRPDGVCLKQFDG
LMRFYRPRMNARDRFLTFKALNHSGATMLSLQDFYKFYEVIGLKWKARRSGEYWFDDLPR
TAFLIFKGINLLVKSKAFQYAMYLVVAINGIWILVETNMLIDGVSWTHVVPLSYIIFLTI
YGTEVLLKITGLGPLTYFSSGWNLFDFSVTVFAFLGLIALAFDMEPFYFILVLRPFQLLR
LFKIKQRYRNVLDTMFELFPRMASLGLTLIIFYYSFAIVGMEFFADVVYPNCCNTSRVAD
SYRQKNVTIGNRTMLEEGYYYLNNFNNILSSFVTLFELTVVNNWYITMEGVTSQTTHWSR
LYFMTFYIVTMVVMTIIVAFILDAFVFRMNYSRKNREPLDDPEDEMGIVFETEMSQTEAL
QTLDLYKHTLGVTNLSSLQDMCVTLERSGHSSLVFLGRRSRTKSDLSMKMYEEEIQEWYE
EYSRTNLQPDETFHRELDSPEASATNSIN
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcagtagtacatttgacaacatgactggactgacacatgataggccagtgcaa
atgtcctcattctgccagcagtttgcatctgtcgatggggcaggaaattatgatgtgaat
aatgttgtcattccgaccccaggagcaccagaccccagggcccagaattctttgcggcag
agttgggaaatgaactaccaggaagcagcaatatacctgcaggagggagagaataacgac
aagtttttcactcatccgcgaaatgcccatgcgctcagtgcctacctgtttgctcacaat
caccttttctatgtgatggagctgctgactgcggtgttactcatgcttctgtccctctca
gaggcccctgccgtcccctttctccgcttggatgtctatgttcatgcaacactggagtta
ttggtattggtaatggtggcctttgagttgtgcatgaagctccgatggcttggctttcac
acctttatacgacataagaggaccatggtgaagacatgtgtcctgtttattcaattcgtc
gaggcaattgtggtcttagtccggcagacatctcacctgcgtgtaacgagagccctgcgg
ccgatctttttggtggactgtcgttactgtggagctgttcgcagaaacttgaggcagata
tttcagtcacttcctcccttcattgatattcttctgctgctgcttttcttcatggtcatc
tttgccatcctaggattctgtttgttctcagccaactcagccgacccttattttagcaca
ctggagaacagcattgtgagtttgtttgtccttctgaccactgcaaattttccggatgtg
atgatgccagcatattcaaagaatcgttggtcatgtattttcttcattgtgtatctgtcc
atcgagctctacttcatcatgaatctactcctggcggtagtttttgatacttttaatgga
gttgagaagatgaaattcaaatctcttcttctacacaagcgatcagctgtagagcacggc
ttccagctgctagttagtcggcagaggccagatggagtgtgtttaaaacagtttgatgga
ctgatgcgattctatcgtccacgaatgaatgcacgggatcgtttcctcactttcaaagcc
ctcaaccattcaggcgcaaccatgctgagtctccaggacttttataagttttatgaagtg
atcgggctcaaatggaaggctcgacggagtggggagtactggtttgatgatcttcctcgt
actgcattcctcatcttcaaaggaatcaatttacttgtgaaatccaaagctttccaatat
gcaatgtatctggtagttgcaattaatggcatctggatcctagtggagactaacatgtta
attgatggcgtctcatggactcatgttgtcccattgagttacattatttttctcacaatt
tatggaactgaggtcttgttgaagatcacaggccttggtcctttgacatatttcagctca
gggtggaacctctttgatttctcagtaacagtctttgcctttctgggattgattgctctg
gcctttgacatggagccgttctacttcatcttggtgttgagaccttttcagctcctccgg
ttgtttaaaattaaacagcgctatcggaatgttttggacacaatgtttgaactgttccca
cgtatggccagtctaggtctgactctgattatcttctattattcttttgccatcgttgga
atggagttttttgctgatgttgtttatccgaactgctgcaacactagcagagtcgctgac
tcgtatcgccagaaaaatgtgaccattggaaaccgaacaatgctagaggaggggtattat
tatctcaataacttcaataacatcctaagcagctttgtcactctttttgagctaacagtg
gtgaacaactggtacatcactatggaaggtgtaacatcacaaacgactcactggagtcgc
ctttatttcatgaccttttacattgtcaccatggttgtcatgacgataatcgtggccttc
attctagatgcatttgtcttcaggatgaactacagtcggaagaacagagagccgctggat
gacccagaagatgaaatggggattgtctttgagacagagatgtcccagactgaagctcta
cagactctagacttgtataaacacacactgggtgtcaccaacctaagctcactgcaggac
atgtgtgtgactctggagcggagcgggcattcctcattagtatttctgggtcgaaggtca
cgtaccaagagtgacctcagcatgaagatgtacgaggaagagattcaggaatggtatgag
gaatattccagaacaaacctgcagcccgatgaaacattccacagagaactggacagccct
gaagctagtgccacaaacagcattaactaa
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