Sinocyclocheilus grahami (golden-line barbel): 107593668
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Entry
107593668 CDS
T04918
Symbol
arhgef1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107593668 (arhgef1)
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107593668 (arhgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107593668 (arhgef1)
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107593668 (arhgef1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
SSP160
Motif
Other DBs
NCBI-GeneID:
107593668
NCBI-ProteinID:
XP_016138989
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MDCEDAHNGRGPSGAQCSNPAMNIIGAEDEDFENDKQPIVDDQCSDFNSIELLKTRPTHL
LVFIHHVMLQFDCAPVLCYLHAGLFKDFNAKDTKKHFGEFYNNFLEKGAILKVSLPNNLA
SELDRMRPEMINEEQQKRFANEIQFMQSPEILRQLDDFRQKRMMGMTPNEHELNDVESHR
PTDRIPMEMKEKAVAESLLERMFEANPSIVADKDKSNCIFGAVAIYMKHIGVKTRALDNK
KTKSGWRPSVPSVLKPWGTNKPNKIVKPSAFTHDGKQTRLDFEVKQTKPSVPPHRVSVSD
SGTTPVRKPGVAGSGSTHGSESSEEKTISVSVTPSPDSQSDTGVNNNLSDPRPVSVGGDA
SPVSTGGGIDILPDDSQDSGKKKTRNVRRSESLCVERRHSRRSGSTRAKQSRSRSDVDLQ
STSTSHPLSPSPQHSVSVEGGLLPDGLVTGPVFGPFPQQEEMEPRLLELEQDPPNWRVLA
SPEDLRKLSKKEIKRQEVINELFSTEHAHVRMLSVLQTVFSRPLEREEIITVTELATIFP
SLDEIIEMHYAFYENLKKQRQEDEYIVKIISMPLLNRFSGSEGEWFQKLTARFCSYQSWA
LEQIKSRQKKDPRFNAFILEAESKPQCRRLQLKDIIPIEMQRLTKYPLLLENIAKNTDDE
AEKENINQAAESCRKILNHVNEEVKLMENLLILKDYQRRLDTSGLKPSNDLYSEYKNIDL
TTRIMLFEGPLTWRVTKEKAIDVHCVLLSDMLVLLQKQDDKMVLKCQSKSNIAIQEGKQM
LSPIIKLESVFLRDVATDPKALYVIFTWDSGAQIYELVAQSIGERKNWTEVIKTTVDELK
KRDGNKLNRERGNSIPSSFIGPVYSPLHPPLSPTENGGDLLKSRSGRFKDSLTDEKSRET
DSSLIDYLAANGFDLLSHSHAPPEKSSIGALDEVMYLKRLLVGSISLSDDSQTLGENAPE
SQEADGGHLSVEESITEGRTEEESGGDGGNKGEEERGISAPLVLSEERMEEVQRRLQTLG
EQLKRLQAVEEDHYKLQEALAKYSLQGGHYN
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggattgcgaagacgcacataacgggcgcgggccgtcaggtgctcagtgttcaaatcca
gccatgaacataattggagcagaggatgaagactttgagaatgataagcaacctatagtg
gatgatcagtgcagtgactttaacagtattgagctgttgaagaccaggcccacccaccta
ctggtcttcattcatcatgtcatgttacagtttgactgtgctcctgtgctatgctacctt
catgctggcctcttcaaggacttcaatgccaaagacaccaagaagcactttggggaattc
tacaacaacttcttggaaaaaggagcgattcttaaagtatctttgccaaataacctagcc
tctgaactggatcgcatgcgtccagaaatgattaacgaagaacaacaaaaacgctttgct
aatgaaatacagttcatgcagagtccagagatactgcggcagctggatgacttcaggcag
aagaggatgatgggaatgactcccaatgagcatgaactaaatgacgtggaatcccatcgt
ccaaccgaccgcatccctatggagatgaaggagaaggcagtagctgaatccttgctggaa
aggatgtttgaggccaacccctcaattgttgccgacaaggacaaaagtaactgcatcttt
ggagcagttgccatttatatgaagcacattggcgtcaagaccagagcacttgacaacaag
aagactaagtcaggatggcggccctctgtcccttctgtgctgaagccatggggaaccaac
aaaccaaacaaaatagtcaaaccgtctgcattcacccatgatggtaagcaaactagattg
gactttgaagtaaagcaaaccaaaccaagcgtcccacctcatcgagtgtccgtaagtgat
agtggcaccactccagtgcggaaacctggtgtggcagggtcaggtagcacacatggctcg
gagagcagtgaagagaagaccatcagcgtcagtgtgactcctagtcccgactctcagagt
gacacgggtgttaacaacaatctttcagaccccagaccagtttcagtggggggagatgca
tctcctgtcagcactggtgggggcattgatatccttccagatgacagtcaggacagtggc
aaaaagaagacaaggaatgtgcggcgcagcgagagcctttgcgtggagcgccgtcactct
cgccgtagtggctctacccgggccaagcagtctcgctcccgtagcgacgtggacctgcag
tcaacttccacctcccaccccctctcaccctccccacagcattcagtctctgtggaaggt
gggttgttgcctgatggcctcgtcactggtcctgtttttggccccttccctcagcaggaa
gagatggagccccgtctcctggagctcgagcaggacccgcccaactggagggtccttgct
tctcctgaggacttgagaaaactgagcaagaaggaaatcaaaagacaagaagtcatcaat
gagctgttttcgacagagcatgctcatgtccgtatgctgagtgtattgcagactgttttc
tctcgtccgctggagagggaagagattattaccgtgactgagctggccaccatcttcccc
agcctcgatgagatcatagagatgcattatgctttctatgagaacctgaaaaaacagcgg
caggaggatgagtacattgtcaaaatcataagcatgccacttctcaacaggttcagtgga
tcagagggagagtggtttcagaagctcacagcacgcttctgtagctaccagtcctgggct
ctggagcagataaagagcagacagaagaaggatccccgttttaatgcttttatactggag
gcagagagtaagccacagtgtcggaggctacagctgaaggatatcattcccatagagatg
caaagactaaccaagtaccctcttctgctggaaaacattgccaagaacacagatgatgaa
gcagaaaaagagaacattaaccaagcagcagaatcctgccgcaagatcctcaaccatgtc
aatgaagaagttaaactcatggagaacctgctgattttgaaagactatcagcgccggctg
gacacctcaggactgaaaccgagcaatgacctctacagtgagtacaagaacattgatctg
accaccagaataatgctgtttgaaggacctctgacatggagggtgaccaaggagaaagcg
atcgatgtgcactgtgttttgctgtcagacatgctggtcttgcttcagaagcaggatgat
aagatggttttgaagtgtcagagcaaaagcaacatagccattcaggaaggcaaacagatg
ttgagtccaatcatcaaactagaatctgttttcctcagagatgtggccactgacccgaag
gccctctatgttatcttcacttgggacagcggagcacagatctatgaactagtggctcag
tccatcggggagaggaaaaattggacagaggtgattaagactacagtcgacgagttgaag
aagagggacgggaataagctaaacagagaaagaggcaacagcatacctagcagcttcatt
ggacctgtatacagccctttgcatccccctcttagccccactgaaaatggaggagacctg
ttgaaaagtcgcagtgggcgatttaaagacagtcttactgatgagaagagtagagaaact
gattcttcactcatagactacctagcagccaatggctttgacctgctcagccatagccac
gcccctccagagaagtcttctattggtgctttggatgaagtcatgtatttgaagaggcta
ttggtcggcagtattagcctgtcagatgactctcagactcttggggaaaatgcacctgaa
agccaggaggcagatggaggtcatttgtcagtggaggaatccatcacagaaggaagaact
gaagaagagagtgggggagatggagggaataaaggagaagaggaaagagggataagtgct
cctctagtgctttctgaggaacgcatggaggaggtgcagaggagactgcagactcttggg
gagcaactgaagagattgcaggctgttgaggaggaccattataagttgcaagaagctctt
gctaaatattcacttcaggggggccattacaactga
DBGET
integrated database retrieval system
