Sinocyclocheilus grahami (golden-line barbel): 107595767
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Entry
107595767 CDS
T04918
Name
(RefSeq) rho guanine nucleotide exchange factor 1-like isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04270
Vascular smooth muscle contraction
sgh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
107595767
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
107595767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sgh04131
]
107595767
Membrane trafficking [BR:
sgh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
107595767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
DUF7744
SSP160
RGS
Motif
Other DBs
NCBI-GeneID:
107595767
NCBI-ProteinID:
XP_016141763
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MDYEDAHNGRVPSGAQSSNPAMNIIGAEDEDFENDEQPIVDDQCSHFNSIELLKSKPTHL
LVFIHHVMLQFDCAPVLCYLHADLFKNFNAKDTKKHFGEFYNTYLEKGAILKVHVPNNIA
SELDRMRPEMISVEQQKRYVYDIQFKQSPEILRQLDDFRQKRMMGMTPNEHELNDVESHR
PTDRIPMEMKEKAVAESMLEKMVEANPSIVADKDKSNCVFGAVAFYMKHLGVKTRALDNK
KTKSGWRPSVPSVLKPWGTNKPNKPEKKPPPFHDGKQTRLDFEVKPTKPNVPPHQESISD
SAATSGRKPGVAGSGSTHGSESSEELTPSPDSQSDTVGVNNNRSDPKSVSEGGDASPVSL
SICEPLPVIDMLPDDSQDSGRKKTRNVRRSESLCVERRHSRRSGSTRAKQSRSRSDVDLQ
STSTSHPLSPSPQHSVSAEGGLLPDGLVTGPTFGPFPQQEEMEPRLLELEQDPPNWRGLA
SPEDLKKLSKKEIKRQEVINELFTTEHAHVRMLSVLQTVFSRPLEREEIMSMTELATIFP
SLDEIIEMHYAFYENLKKMRQEDKYIVKIISTPLLNRFSGSEGEWFQKLTARFCSYQSWA
LEQIKSRQKKDPRFNAFILEAESKPQCRRLQLKDIIPTEMQRLTKYPLLLENIAKNTDDK
AEKENINQAAESCRKILNHVNEEVKLMENLLILKDYQRRLDTSGLKPSNDLYSEYKNIDL
TTRKMLFEGPLTWRVTKEKAIDVHCVLLSDLLVLLQKQDDKMVLKCQSKSNIAIQEGKQM
LSPIIKLESVFLRNVATDPKALYVIFTWDSGAQIYELVAQTVGEKKNWTEVIKSTVDELK
KRGGNKLKRDRGGSMPSSASGPAYSPLQPPLSPTENGGDLLKSRGGRFTDEKSRETDSSL
IDYLAANGFDLLSHSHAPPEKSAIGALDEVMYLKRLLVGSVSLSDDSQTENGGTAPESQE
ADGVEESSTEGRTEGEESGGDGGNKGEEEREISAPLVLSQERLEEVQRRLQTLGEQLKRL
QAVEEDHYKLQEALAKYSLQGGHYN
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atggattacgaagacgcccataacgggcgcgtgccgtcaggtgctcagagttcaaatcca
gccatgaacataattggagcagaggatgaagactttgagaatgacgagcaacctatagtg
gatgatcagtgcagtcactttaacagtattgagctgttgaagtccaagcccacccaccta
ctggtcttcattcatcatgtcatgttacagtttgactgtgctcctgtgctatgctacctt
catgctgacctcttcaagaacttcaatgccaaagacaccaagaagcactttggggaattc
tacaacacttacctggaaaaaggagcgattctcaaagtacatgtgccaaataacatagcc
tctgaactggatcgtatgcgtccagaaatgatcagtgtagaacaacaaaaacgctatgtt
tatgacatacagttcaagcagagtccagagattctgcggcagctggacgacttcaggcaa
aagaggatgatgggaatgactcccaatgagcatgaactaaatgacgtggaatcccatcgt
ccaaccgaccgcatccccatggagatgaaggagaaggcagtagctgaatccatgctggaa
aagatggtagaggccaacccctcaattgttgccgacaaggacaaaagtaactgcgtcttt
ggagcagttgccttttatatgaagcaccttggtgtcaagaccagagcacttgacaacaag
aagactaagtcaggatggcggccctctgtcccttctgtgctgaagccatggggaaccaac
aaacccaacaaacccgaaaaaaaaccgcctccattccatgatggtaagcaaactagattg
gactttgaagtaaagccaaccaagccaaatgtcccacctcatcaagagtccataagcgat
agtgctgccacttcagggcggaaacctggtgtggcggggtcaggtagcacgcatggctcg
gagagcagtgaagagttgactcctagtcccgactctcagagtgacacagtaggtgtcaac
aacaatcgctcagaccccaaatcagtatcagaaggtggagatgcatctcctgtcagtctg
tccatctgtgaacctctccctgtcattgacatgcttccagatgacagtcaggacagtggc
agaaagaagacaaggaatgtgcggcgcagcgagagcctttgcgtggagcgccgtcactct
cgccgtagtggctctacccgggccaagcagtctcgctcccgtagcgacgtggacctgcag
tcaacctctacctctcaccccctctcaccctccccacagcattcagtttctgcggaaggt
ggattgttgcctgacggcctcgtcactggtcctacttttggccccttccctcagcaggag
gaaatggagccccgtctcctggagctagagcaggacccgcccaactggaggggccttgct
tctcccgaggaccttaaaaaactgagcaagaaggaaatcaaaagacaagaagtcatcaat
gagctgtttacgacagagcacgctcatgtccgtatgctgagtgtattgcagactgtgttt
tctcgtccactggagagggaagagattatgagcatgactgagctggccaccatcttcccc
agcctcgatgagatcatagagatgcactatgctttctatgagaacctgaaaaaaatgcgg
caggaggataagtacattgtcaaaatcataagcacgccacttctcaacaggttcagtgga
tcagaaggagaatggtttcagaagctcaccgcacgcttctgtagctaccagtcctgggct
ctggagcagataaagagcagacagaagaaggacccccgttttaatgctttcatactggag
gcagagagtaagccacagtgtcggaggctacagctgaaggatatcattcccaccgagatg
caaagactaaccaaatatcctcttctgctggaaaacattgccaagaacacagatgataaa
gcagaaaaagagaacattaaccaagcagcagaatcctgccgtaagatcctcaaccatgtc
aatgaagaagtcaaactcatggagaatctgctgattttgaaagactaccagcgccggctg
gacacctcaggactgaaaccgagcaatgacctctacagtgagtacaagaacattgatctg
accaccagaaagatgctgtttgaaggacctctgacatggagggtgaccaaggagaaagcg
atcgatgtgcactgtgttttgctgtcagacctgctggtcttgcttcagaagcaggatgat
aagatggttttgaagtgtcagagcaaaagcaacatcgccattcaggaaggcaaacagatg
ctgagtccaatcatcaaactagaatctgtttttctcagaaacgtggccactgacccaaag
gccctctacgtcatcttcacctgggacagcggagcacagatctatgaactagtggctcag
accgtcggggagaagaaaaattggacagaggtgattaaatctacggttgacgagttgaag
aagaggggcgggaataagctgaaaagagacagaggtggcagcatgcccagcagtgccagt
ggacctgcatacagccctttgcagccccctcttagccccactgagaatggaggagacctg
ttgaaaagtcgcggtgggcgatttactgatgagaagagtagagaaactgattcttcactc
atagactacctagcggccaatggttttgacctgctcagccatagccacgctcctccagag
aagtctgctattggtgctttggatgaagtcatgtatttgaagaggctattggtcgggagt
gttagtctgtcagatgactctcagaccgaaaatggagggacggcccctgaaagccaggag
gcagatggagtggaggaatccagcacagaaggtagaactgaaggagaagagagtggggga
gatggagggaataaaggagaagaggaaagagagatcagcgctcctctagtgctttctcag
gaacgcttggaggaggtgcagaggagactgcagacacttggggagcaattgaagagactg
caggctgtcgaggaggaccattataagttgcaagaagctcttgctaaatattcacttcag
gggggccactacaactga
DBGET
integrated database retrieval system
