Sinocyclocheilus grahami (golden-line barbel): 107596061
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Entry
107596061 CDS
T04918
Name
(RefSeq) zinc finger protein GLI2-like isoform X1
KO
K16798
zinc finger protein GLI2
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
107596061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107596061
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
107596061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
107596061
NCBI-ProteinID:
XP_016142154
LinkDB
All DBs
Position
Unknown
AA seq
1440 aa
AA seq
DB search
METTSPTTTEKKECKGSGLDGSSFSDLPKKPSPTTASRAPHLFSTFHTPIPIDMRHHEGR
YHYEPHPLHHMHGPHGLAGSPIISDISLIRLSPHAGATGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPPDAVTHEHLKERSLFGLPPPPPGANPSEYYHLITSHRSPYGD
LLMQTGAAAAHLPDYMSPVDMSRFPSPRLTPRLSRKRALSISPVSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRGLNAFGHTPP
LLHPSPSLNTRQTLMAAAALTNNNSADTNTESSQNAGGDPAVSSTVNPMIFKRSKVKTEA
DGPHPISPGCQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEFDTQDQLVHHINNDH
IHGEKKEFVCRWKECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKT
HLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLR
KHVKTVHGPDAHVTKKQRGDAPPKPHPPKGNGENEAHAKHARGRTDGSGEANSTIRGVED
CQHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAMHSGGSLGDLSALDD
MPVVDSTGSPGTSAGVGLQLRKIRGGLLNLENIKKEKLKTVRDPCSWTNASPQVRNTKLP
PIPSIDSLLETPNMGSQMPGPLTQRLGDLSSYEMTMLNQLQERRDSSTSTMSSAYTLSRR
SSGISPCYSSRRSSEASQFGVRNNNVSSADSYDPISTDLSRRSSEASQCGGAGGLTSLLS
LTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSAHLHHSQSVVNSR
RCSDTGYGAPGMMPHEVPANLPRRASDPVRRTTIDLLSLPRVQRFNSISNMTLSRLPAID
LRTFNLQSNTWSDGSLHRHPFSQRPPSISENVLMENMATDGSDQQEEDLVLPDDMVQYLK
SQNGSSNQDPGISVNGGHALDLHGNMTSQQQQQFYGQRRMGMASNNGSHVESVCSDPEQM
ANPQGMNKNNMPVQWNEVSSGSVDATARLPKQQQLRGNLTVVQQKQNFGSYQGFSTNQQI
VPMSQNLASLQQEYPQRVTQRMNSVLQYRQSVTNPCQNLGEQVNPQSGYRQDLNYNSNQC
LTCSGMGPPNGRAVQNQEVQNYRSNFSHTNNVNQQIYIPLTQTAVQNAGRGLIQPRPPSE
PKPLNRQHSGSGMIQQNGCSLSNVNSSEARPKRPGDFGPHSNGNGTMYYSGEIHMLDSSV
GYGSPMSPWTNQAPVASVSTMASPGVNQVTSTVDSTQTLEHTQIDFDAILDDGDHSSLMS
GTLSPGLLRSLSQNSSRLTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacaagtcccaccaccacagaaaagaaggaatgcaaggggtcaggcctggat
ggcagcagtttctcagaccttcccaaaaagccctcaccgaccacagcatcccgagctcct
cacttattctcaaccttccacacgccaattccaatcgacatgcggcaccatgaggggagg
taccattacgagccacatcctctgcaccacatgcatggaccacatggattagctggcagt
ccaattatctctgatatctcgctcatccgactatcgcctcacgctggagctactggagag
tcacccttcaacccacctcacccgtatgtcaacccacacatggagcactacctgcgatca
gtccacagcagccccacactctccatgatctccgcagcacgaggactgagccctcctgac
gcagtgacccacgaacacctgaaggagcggagcttgtttggcctgccccctcccccacca
ggggccaacccttcagagtactatcacctcatcaccagtcaccgcagcccttatggagac
ctgctcatgcagacgggggccgcggctgctcatcttcctgactacatgagcccagtggac
atgtcccgtttccccagtcccagactgacgccgaggttgagcaggaagcgagcgctgtcc
atctctccagtctcggatgccagcatcgacctgcagaccatgatccgcacctcgcccaat
tctctggtggcctacatcaataactcccgctccagctcggctgccagcagctcttacggc
cacctctccgtcggggccatcagtccctccttcacgttcccacatcctatcacaccagtt
gcataccaccagctgctgtcccagcagagaggtctaaatgcgtttggacacactccccct
ctcctacacccttctccttccctcaacaccaggcagacgctgatggcagcagctgctctg
accaacaacaacagcgccgacaccaacacagagtccagccagaatgctggtggagacccg
gctgtcagcagcacggtcaaccctatgatcttcaagaggtcaaaggtgaagactgaagca
gatggaccccacccaatctcacctggatgtcaggatcacatggagttgcgagaggaactt
gataaagatgaatgcaagcaagagcctgaggccgtgtatgagaccaactgccactgggaa
ggatgttccaaagagttcgacacccaggaccagctagttcatcatatcaataatgaccac
atccatggggagaagaaggagtttgtgtgtcgatggaaggagtgctcacgagaacaaaag
cctttcaaggcccagtacatgcttgtggtccacatgcgacgacacactggggagaagccc
cataagtgcacatttgaaggttgctcgaaggcttactctcgactggaaaacctcaaaact
cacttgaggtcccacacaggggagaaaccttatgtatgtgagcatgagggttgtaacaag
gcgttttccaatgcttctgaccgagccaagcaccagaaccgcacgcactcgaatgagaaa
ccatatgtgtgtaagatcccaggttgtacaaaacgctataccgaccctagttctctcagg
aaacatgtgaagaccgttcatggtccagacgcacatgtcactaagaagcagcgtggtgat
gcaccacctaaacctcaccctcctaaagggaatggagaaaatgaggcacacgcaaagcat
gcaaggggaagaacagacgggtcaggggaagccaacagcaccatccgaggagtggaggat
tgccagcatgtcaaatctatcaagacggaaaacacagtgatgtatcagtccagccctggt
ggtcagtcatcatgtagcagtgagccatcgccacttggcagtgccaccaacaatgacagt
ggagtagagatggctatgcacagtggaggcagtttgggggacctgagtgctttagatgac
atgcctgtagtagattctactggttctccaggtacttctgcaggagtgggtctccagctg
cgtaaaatcaggggaggactactaaatcttgagaacatcaagaaggaaaaactaaaaact
gtaagagacccctgctcctggacgaatgcatcacctcaagtccgaaataccaagctgcct
ccaataccttctattgactcactgctggagactccaaatatgggcagtcagatgcctgga
cctctgacccaacgtttaggagacttgtcttcgtatgagatgacaatgctaaatcagctg
caagagcgtagagacagctctacgagcacaatgagctcagcatacacgctaagtcgtcgg
tcctctggtatttcaccctgctactccagtcgtcgctctagcgaagcttcacaatttggt
gtccgtaacaacaacgtcagttcagcagactcctatgaccccatctccacagatctgtca
cgccgttccagcgaagctagccaatgtggtggtgcaggtggactcacaagtttactaagt
ctcacgccggctcaacactaccgtctcaaagcaaaatacgctgcagccacagggggtgca
ccaccaacacctctgcccaacatggatcgcatgagtcttagaactagaatggccctgtac
aatgactcgcaagaaagttcggcacatttgcaccattcccaaagtgtagtcaactcaaga
cgctgcagtgacactggctatggcgcccctggcatgatgcctcatgaagttccggctaat
cttccacgacgagcaagcgatcctgttcgtcgtacaactatcgacctgctctccttgccg
agggttcagcgattcaacagcatcagcaacatgaccctatcacgtctgcctgcgatagat
ctacgtactttcaacttgcagagcaacacctggtctgatggcagcttgcatcgtcatccc
ttcagccagaggccacctagtatttcagagaatgttttaatggagaatatggccactgat
ggaagtgatcagcaagaagaggatttggtgctaccagatgacatggtacagtacctcaag
tcccagaatggtagctcaaatcaggacccagggatttctgtcaatggtggtcatgcacta
gacttacatggtaatatgacctcccaacaacaacagcaattctatgggcagcggcgaatg
ggcatggcaagcaacaacggaagtcacgtagagtctgtttgctcagatccagagcaaatg
gccaatccgcaaggcatgaacaagaacaacatgcctgtacaatggaatgaggtcagttct
ggttctgtggatgcaactgcaaggcttccaaagcagcaacaactccgagggaacttgaca
gtggttcagcagaaacagaactttggttcttaccaaggctttagcactaatcaacagatt
gtaccaatgagccagaatctggctagcctgcaacaggaatatccacagagggtcacccaa
aggatgaattctgtactgcagtatcggcagtctgttaccaatccatgtcagaatctcggc
gagcaagtaaaccctcaatcgggatatcggcaggacctcaattacaactccaatcaatgc
ctaacatgcagtggcatgggtccacccaatgggagagcagtgcaaaaccaggaggtgcag
aattacagatccaacttttcacatacaaataacgtcaaccagcaaatttacatccccctt
actcagacagccgttcaaaatgcaggcagaggactgatacagcccagacctccgtccgag
cccaaacctttaaatagacaacactcaggttcaggtatgattcagcaaaatggttgctcc
ctgtccaacgtcaactcctcagaagctagaccaaagagaccaggtgacttcggtccgcac
agcaatgggaatggcactatgtactattcaggagagatccatatgttggacagtagcgtg
ggttatggttctcccatgtctccatggacaaaccaagcccctgttgcttcagtgtctaca
atggcatctcctggggttaaccaggtcaccagcacggtggactccactcaaaccctcgag
cacactcaaatagactttgatgccattttggatgatggagaccattcgagcctaatgtct
ggcacattaagtccaggccttctgcggagtctttcgcagaattcctcacgactcaccacc
ccgcgtaactccgttactctagcctcaataccggcaggtattggcaacatggccattggt
gacatgagctcaatgttaacagcccttgcagaggaaagcaaattcttaaacatgatggct
taa
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integrated database retrieval system
