Sinocyclocheilus grahami (golden-line barbel): 107598585
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Entry
107598585 CDS
T04918
Name
(RefSeq) interferon regulatory factor 3-like
KO
K05411
interferon regulatory factor 3
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04620
Toll-like receptor signaling pathway
sgh04621
NOD-like receptor signaling pathway
sgh04622
RIG-I-like receptor signaling pathway
sgh04623
Cytosolic DNA-sensing pathway
sgh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
107598585
04621 NOD-like receptor signaling pathway
107598585
04622 RIG-I-like receptor signaling pathway
107598585
04623 Cytosolic DNA-sensing pathway
107598585
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
107598585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107598585
04131 Membrane trafficking [BR:
sgh04131
]
107598585
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
107598585
Membrane trafficking [BR:
sgh04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
107598585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
107598585
NCBI-ProteinID:
XP_016145450
UniProt:
A0A672PLU3
LinkDB
All DBs
Position
Unknown
AA seq
451 aa
AA seq
DB search
MAQAKPLFVPWLCEQIQSGRYPGVCWTHKEQRQFSIPWKHALRQDSNSDDVLIFKAWAQT
SAAGDGRLNGDHSVWKRNFRSALRAKGFKMIFDKKNDAANPHKVYQFPSEPHSAALGSEG
SQETDFSPDLYVEDSDVFSTHPPQGLDQDFTGLNLKESPSRVHEVWNPDPLYLGLEDQGL
FQETSPCPESQYTELHYQIMDTHAPFSSPEGGVGVLEQISPPDGAMAANQPDGEGVGHQG
SIPMPKLETFFQIKVYYKGKLVKEQLVENDTGFRLMYQGNMDESMGSADLPVVLLPIVLP
EVIVDQIQAKHTNAILNSLGGLEIRRLDGVVLGHRWGLSRIYWGLCKHENSQTTRELSKN
TPEAIYFFKEYISGLMEFMQTSRESPSCTLYLFLGEKWPDPKMKPWEKKLIMIEVILTSL
EDLKTMAVANGASSLESVELQLSLEQMMELC
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagcaaaaccgctctttgtgccctggctgtgtgaacaaatccaaagtggaagg
tatcctggagtgtgctggacccataaagaacaaagacagtttagcattccctggaagcat
gctttaagacaggactccaacagtgatgatgtcctcatattcaaggcctgggctcagacg
agtgccgctggagatggcaggttaaatggagatcactctgtttggaagagaaacttccgt
agcgctcttcgtgcaaaaggcttcaagatgatatttgacaaaaagaacgatgccgctaat
ccacataaagtctatcagtttccatctgaacctcattctgcagctttgggatctgagggc
tctcaagagactgatttctcaccagatctatatgtggaggatagtgacgtgttctctaca
catccaccccaaggattggatcaagatttcacaggactaaaccttaaggaaagtccctca
cgagttcatgaagtttggaatccagatccgttatatctggggctcgaagatcaaggactc
ttccaagaaaccagtccatgtccagaatcccagtataccgagctccattatcagataatg
gatactcatgcgcccttttcttcacctgagggtggtgttggtgttttggagcagatttcg
ccacctgacggggcgatggctgcgaatcaacctgatggtgaaggtgtgggtcatcagggt
agcattcctatgccaaaactggagacattttttcagattaaggtgtattataaagggaag
ctggtgaaggaacagttggtggagaatgacactggtttcagactgatgtatcagggaaac
atggacgaatccatgggcagtgctgatctaccagtggtcctactacctattgtactacca
gaagttattgtggatcagatccaggccaagcatacgaatgcaattctgaacagtctgggg
ggtctggagatcaggagattggatggagtggttttgggtcaccgttggggattgagcagg
atctactggggtctgtgcaaacacgaaaacagccaaacaaccagagagctctccaaaaac
acacctgaggccatctacttcttcaaagagtatatatcaggtttgatggagtttatgcag
acaagccgagaatctccttcctgcactctttacctctttctgggagagaagtggcccgac
cccaaaatgaagccatgggagaagaaactcatcatgatagaggttattctgacttcactg
gaggatttgaagacgatggctgtcgcaaacggggcgtcttcactggagtcggtggagctc
cagctctctctggagcaaatgatggagttgtgttaa
DBGET
integrated database retrieval system
