Sinocyclocheilus grahami (golden-line barbel): 107601022
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Entry
107601022 CDS
T04918
Name
(RefSeq) protocadherin-15-like
KO
K16500
protocadherin-15
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
107601022
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sgh03037
]
107601022
04515 Cell adhesion molecules [BR:
sgh04515
]
107601022
Cilium and associated proteins [BR:
sgh03037
]
Primary cilia and associated proteins
USH complex and associated proteins
107601022
Cell adhesion molecules [BR:
sgh04515
]
Cadherins
Protocadherins
107601022
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
PCDH15_12th
Cadherin_FAT4_N
Cadherin_CELSR2_9th
ECD
Cadherin_2
CDH23_a-b
Motif
Other DBs
NCBI-GeneID:
107601022
NCBI-ProteinID:
XP_016148523
LinkDB
All DBs
Position
Unknown
AA seq
1784 aa
AA seq
DB search
MRRRWWRSDCLELAIGLFVIITQISAQNTEDWHYEECKLSRSGPPATIVTIDEESPNVQE
QPSPPSKGRRLYSYSRNTSIAISPISFFHKCFISSLFYCLSPPSYITTIVVQVQCTNELV
GTVILHEVRIVVRDRNDNTPRFQQPRYYVSVNELTPVGTTIFTGFSGNNGATDIDDGPNG
QIEYAIQYNPNDPMSNRTVRVSGTLSGNIVLAERLNYEERTRYLIIVQAHDRAPYPGTRR
TATTTLTLDVSDGDDLGPMFLPCVLVNNTQDCNPIIYRVAIPELTDPSKLNPLNVTPPIR
AIDQDRNIQPPSDRPGVMYFILVGQPATYLEFFSLNRSTAELRLLKPVDRELYQHFNLVI
KAEQDNGHPLPAYADLQIEILDENNQVPYFQRSSYQGFISESASVGTTISGSANLTAPLG
IIALDNDIEETKDPQLKITLNDYTSIFSITSTGITRYLTLLKPVDREIQTNYTLTLVASD
GVQQSRPVTVDILVIDANDNTPTFGQVSYSVEIFTNMLPGETVLQLTAQDADAGLNGLIT
YAILAGDQGDFIINNRTGRIMLAPGVTLTVGRSYALTVRASDNAPDTERRSSITTVYIEV
LPPNNQSPPRFPQQTYNLEISEGMRIGAILLNLQATDRELDPITYQIQSGDPQHVFNLSR
TIGLLLLAKPLDRETIDQYRLIVTASDGHPGGISTATVSIVITDVNDNDPSFDLTLLRNL
TVREEEANVFVGQVRATDPDAGLNGQIRYRLLSFASLFTINATGSIFTAVPLDRETRSRY
DLIVEASDGAVNPRRATITLLVEVTDINDNSPVFSQPIYTVNVPENTPAGTVILRLSAED
ADLVSNVTYRIKTEAAQQLFAVNRLTGAVSVLQALDFEDLPAGNSTYTFEVEVLDHGGVL
PPGTATVIVRITDVNDFSPVFRQALYKGLVAPNAEKGTVITTVLAEDQDPPGTPASKVRY
KVDQDLSPYSGSIFDVETDTGRVITKVNLNEQPNAIFRLVVIAYDDGEPVKTNRTTVEIT
VLQPSRIPIFTEEEYRFSPVSESAPVGTPVGMILAAAVNTTVFYSIVSGNEGGEFMVNNR
TGIIYTNNLLDYESVTSYVLRVQADSLAIILASLRAPSKTNTAKVFIDVQDENDHPPVFT
RSLYIGGVTEDTKTFTTVLKVVATDIDTGNYSKMAYRLITPPSPEGQDSFVIEPYTGVIK
SAIMFRNMRRSYFKFEVIATDNYGEGLSGRADVVVSVVNALDMQVVVSNVPPTVVEENKE
QLISILERYVQDQIPGAKVIVESIGPRRHGEGYELEDYTKSDLQVYAIDPLTNRAISRQE
LFKFLDGKILDINKEFQPYLGEGGRILEIRSPDIVASVKKETHSLGVLYRRQAECAKTAR
IQMALPAGKSTGGGAPTNLYEELGDGGMLGLQRRRKSVIEEADRQSRIRAFASRAIAAHK
LCAGNGKLLDRLPKSESNVTFLLDQRPLTTQNPLYQDGSSSSPEPNSEVQMVIGFLDRDV
PSPTSPISQMTSWSLPSRIRGRGLYDALCRQALLDPAKWEEQELKAGLKDSREELDADVD
QGGRSTETKLSVREQARQFEQQALAERTPRQSRDSYASLDPDDPLLTAFMFSSSPISVGK
DIPPCIIIAGGDGETPPPPMAQRPTPPVLRKFSSSISNYMTVEPCEITLEFISDSPESPP
TPLPVPSCSLLSPPPVQQDSTPPPTPTPVQSPEPPAQSPTPTRKLRGILKNTGRSANSLD
VKDDSTCEGGLKDSMTVVLKVSESKPGETDGSQSESDSSAQLPN
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgctggtggcgatcggactgtctggagttggcgattggcttgtttgttatc
atcacccaaatctcggctcaaaacactgaggactggcactatgaggagtgtaagttgtca
cggtcgggtccacctgccacaatcgtcaccattgatgaggaaagtccaaatgtacaagaa
cagccaagtcctccatcaaaaggcaggagattgtactcctacagccgcaatacgagcatt
gcgatttctcctatttcctttttccacaagtgcttcatctcctctctcttctactgtctg
tctccacccagttacatcaccaccatcgtggttcaggttcagtgcaccaatgagctggtg
ggaacagttattctgcacgaagtacggatagtggtgagggacagaaatgacaacacgcct
cgtttccagcagcctcgttactatgtatcagttaatgagctcactcctgtcggtaccacc
atcttcaccggcttctcaggaaacaatggagccacggacatcgatgacggaccaaacgga
cagatcgaatacgccattcagtacaacccaaatgacccgatgtcaaacaggaccgtgcgt
gtttctgggacgctgtctggtaatattgttttggcagagcggctgaactatgaggagaga
acgcgctatctaattatagtccaggcccatgaccgggctccgtatccgggaactcgtcgc
acagcaaccactactctaactctggatgtctcggatggagatgatctgggtcctatgttc
ctcccgtgtgttctggtcaacaacacacaggactgtaaccccatcatataccgtgtggct
attcctgagctcactgacccgagcaaactgaaccctctgaatgtgacacctcccattcga
gccatcgaccaggacagaaacatccagccaccctcagacagaccgggagtcatgtacttc
atactggttggtcaacctgctacgtacctagaattcttttcgctcaacaggagcacagct
gagctgcggctgctgaagcctgtggacagagagctgtaccagcacttcaatctcgttatt
aaggccgagcaggataacggtcaccctcttcctgcatacgctgacctgcagattgaaatt
ctggatgagaacaaccaggtgccatatttccagcgttcctcgtaccagggcttcatcagt
gagtctgcctctgttggcaccaccatctcagggagcgccaacctcacggccccgctgggc
atcatcgcactggacaatgacatagaagagacaaaagatcctcagttgaagatcactctg
aatgactacacctccatcttctccatcacatctactggcatcacacgctaccttactcta
ctgaaaccagtggaccgagagatacagaccaactacaccttaacgctggtggcatctgat
ggcgttcaacagagcagacccgtgacggtggacatcctggtcatcgatgcgaatgacaac
acacccactttcggtcaggtgtcctacagtgtggagatcttcactaacatgctgcccgga
gagaccgtcctgcagctgacggctcaggacgctgatgctggtttaaacggcctcatcacg
tacgccatcctggctggagatcaaggtgatttcatcatcaacaaccgcacaggacgaatc
atgttagcaccaggggtcacactgactgtcggccgttcctacgcactgaccgtgagagcg
tcagacaacgctcctgacacagagaggaggagctccataactacagtctacatagaggtt
ctgccacctaacaatcagagtccaccacgattcccccaacagacctacaacctggagatc
agcgagggcatgaggataggagccatactgctgaacctgcaggctacagaccgtgagctg
gatcctatcacctaccagatacaaagtggtgacccgcagcatgtcttcaacctttcacga
actataggtcttctgctgctggccaaacctctggacagagagactattgaccagtatcgc
ctcatcgtcacggcatctgacggccacccaggagggatttccacggccactgtcagcatt
gtcatcacagacgttaatgacaacgatcccagcttcgacctcactctactcagaaacctg
accgtgagggaggaagaggccaatgtgttcgtgggtcaagtcagggccaccgatcctgat
gccgggctcaatggtcagatccggtaccgtttgctctcctttgcatctctgttcaccata
aacgccacgggcagcatcttcactgcggtgccgctggaccgagagactcggagccggtac
gatctgatcgtggaggcgtcagatggagcggtgaaccctcgcagggccaccatcacactg
ttggtggaggtgacagacatcaatgacaacagccctgtgttttcccagcccatctacacc
gtcaacgtcccagaaaacacccccgctggaaccgtcatcctgagactcagtgcggaggat
gccgatctcgtctctaacgtgacctacagaataaaaacagaagcagctcagcagctcttc
gccgtgaaccgtctgaccggcgccgtatcagtcctgcaggcgctagactttgaggacttg
ccagcaggcaacagcacctacacatttgaagtggaggtgttagatcacggaggagtcctt
cctcctggaacggccacagtcatcgttagaatcacggatgtgaatgacttctccccagtc
ttcagacaggcactttataaagggctggtggctccaaatgcagagaaagggacagtcatc
acaactgtgcttgcagaagatcaagaccctccaggtacgcctgccagtaaagtgcgctac
aaagtggatcaggatctgtctccgtacagcggaagtatctttgatgtggagacggacaca
ggacgagttatcaccaaagtcaacctgaacgagcagcccaatgccatcttcaggctggtg
gtcattgcctatgacgatggagagccggtgaagacgaacagaactacagtggaaatcact
gtgcttcagccctccaggattcccatcttcaccgaggaagagtacaggtttagtccggtg
agtgagagcgctcctgtcgggacgcctgtgggaatgattctggccgcagccgtcaacacc
actgtcttttactccatagtgagcggaaatgaaggaggtgagttcatggtcaataaccgc
actgggatcatctacacaaataaccttctggactacgagagcgtgaccagttatgtgctc
cgcgtgcaggccgactccctcgctatcatcctcgccagtctgcgcgctccctccaaaacg
aacacggcgaaggtatttatcgacgtgcaggatgagaatgatcatcctccggtcttcaca
aggtctctttatatcggaggagtgactgaagacactaagaccttcaccacagtactgaaa
gttgtggctacagatatcgacacgggaaactacagtaagatggcctacagactgatcacc
cccccctcacccgaggggcaggacagtttcgtcattgagccgtacactggcgtcatcaag
agcgccatcatgttcagaaacatgcgccggtcctacttcaagtttgaggtcattgccaca
gacaactatggggagggattgagcggcagggctgatgtggtggtgtccgttgtcaatgcc
ttggacatgcaggttgtggtctctaatgtgccgcccactgtggtggaggagaataaagag
cagctgattagtattttggagcgctacgtgcaagatcagatccctggtgctaaagtgata
gtggaatcgattggccctcggcggcacggagaaggttatgaacttgaggactacaccaaa
tcagacctgcaggtgtacgccatcgaccctctcaccaacagagccatctccagacaagag
ctcttcaagtttctggacggcaagattctggacatcaataaagagttccagccgtacctg
ggcgagggcgggcggattctggagatccgttctcctgacatcgtggcgagtgtgaagaag
gaaactcactctttgggggtgctttacaggaggcaggccgagtgtgccaaaactgcccgt
atccagatggctcttcctgccggcaaatcaacaggaggtggcgctccgaccaatctctac
gaggagctgggagatggcggcatgcttggactacaaaggcgccgaaagtctgtaatcgag
gaggcggatcgacagagtcgcataagagcctttgcctctcgtgctatcgccgctcacaaa
ctgtgtgccggaaacggaaagttgctcgacaggttgcccaagtcagaaagcaatgtcacc
ttcctcttggatcaacggccgctcaccacgcaaaatccgctttaccaggatggatcgtca
agtagtcccgagcccaactcggaggtgcaaatggtcattgggtttttggaccgtgatgtc
ccatctccgacaagccccatcagccagatgacttcttggtctttgccgtcccgtattcga
ggacgagggctttacgatgctctgtgccggcaggcactcttggaccctgccaaatgggag
gagcaagagctgaaggcggggcttaaggacagcagggaagagctcgatgctgatgtagat
caaggtggtagaagcacagaaacaaagctgtcggtccgagaacaagccagacagtttgag
cagcaagctttagccgaacggacgccaagacagagccgggactcttacgcatctctagat
ccagacgacccactgctaaccgccttcatgttctcatccagtccaatttctgttggcaag
gacatcccaccctgcattatcattgcagggggtgatggtgagactcctcccccacccatg
gctcagcgtcccactccgcccgtcctgaggaagttcagctccagtatatccaattacatg
acggtggagccttgtgagatcactctggaattcatatcggactctccggaaagtccacca
acccctcttcctgtcccatcctgctctttactttctcctccacctgtgcaacaggactcc
accccaccacctaccccaactcctgttcagtctcctgaaccccccgctcagtctccgact
cctacacgtaagctaagagggatcctcaagaacacaggcagatctgccaacagccttgat
gtgaaagatgacagcacttgcgaaggaggacttaaagactccatgactgttgttctaaaa
gtgtcagaatctaaaccaggtgaaacagatggcagccaatcagaatcagactcttctgct
cagctcccaaactaa
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integrated database retrieval system
