Sinocyclocheilus grahami (golden-line barbel): 107602054
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Entry
107602054 CDS
T04918
Name
(RefSeq) lysine-specific demethylase 2B-like isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
sgh
Sinocyclocheilus grahami (golden-line barbel)
Pathway
sgh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sgh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107602054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgh03000
]
107602054
04121 Ubiquitin system [BR:
sgh04121
]
107602054
03036 Chromosome and associated proteins [BR:
sgh03036
]
107602054
Enzymes [BR:
sgh01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
107602054
Transcription factors [BR:
sgh03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
107602054
Ubiquitin system [BR:
sgh04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
107602054
Chromosome and associated proteins [BR:
sgh03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
107602054
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
107602054
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
Cupin_8
JmjC
LRR_4
RpoY
Motif
Other DBs
NCBI-GeneID:
107602054
NCBI-ProteinID:
XP_016149929
LinkDB
All DBs
Position
Unknown
AA seq
1280 aa
AA seq
DB search
MEACAESGRKLRSICRRMYDENEDLSDVEEITNIRGFSVEDKLESNSYNSEFVQYMEGKD
FSYEYVQREALRTPLIFKAKDGLGIRMPDPEFTVSEIKGLVGSRRAVDVMDVSTQKGSEM
SMAQFVRYYETPEDERDKLFNVISLEFSHTKLENLIKRPTVVDLVDWVDNMWPRHLKQKQ
TEATNVMSEMKYPKVQRYCLMSVKGCFTDFHIDFGGTSVWYHVFKGRKVFWLIPPSPHNL
SLYEDWVLSGKQSDFFLGDRSDGCQRVELKQGYTFFIPSGWIHAVYTPEDTLVFGGNILH
SFNIPMQLTVYEIENRTKVNSTFRYPFFYEMCWYVLERYVNCLTRRSHLSLEFRIHAAEP
KLVTESLVSAPRLDMEEDSCETRLERTEGTTQPSSTVPPYQTFKSPANDSEDSFKSLPSE
CPKTPSGSPGTEHSGKWTHLTEFELNGLKALVEKLESLPETKKCVPEGIEDPQALLDDVK
VVLKEHADDNPKLAITGSPIVCWPKKTGKPRPLNRPKTKMGSSPSAAPGSTAGGVKLSSS
RGSSSARRRRTRCRKCEACMRKECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTA
VCLVCGEAGKEDTVENEEDKFNMMLMECSICNEIIHPGCLKEKDSGSVVNDELPNCWECP
KCNHAGKTGKQKRGPGFKYASNLPGSLLKDQRMNRDIKEEPESNMSTESYTSTVSPVMKK
KTEREDNPTCKSEDAFKKRSPKLEDNPLRKKRKLFEKDSDSDSNVKKKKKRSKPEDLSTS
NVLGQIKTEREDYEDNRQELERRDFSFVPSEEEDGDDEEEEEEEEETMKEKSSREENGKL
VHKTSTVWEGDQSQGGFNQAGPSSDSGVDTQLRSQRKTKRKPRLPNKELSKELSKQLNQE
IQKTEDCLAHQNGRAVKTEPDSDGEVRKPLRNGSSHLRDWLGPKRELNGSLREQVPVNWI
RTTPTPVIRPTPCRSPPKCVQMERHVIRPPPISPPPDGLPLDDGKNHVMQREVWMAVFSH
LTHQDLCVCMRVCKTWNRWCCDKRLWTTIDLNRCKSITPLMLSGIIRRQPVSLDLSWTNI
SKKQLSWLINRLPGLRILLLAGCSWAAVSALCTSSCPLLRTLDVQWVEGLKDNQIRDLLS
PPTDNRPGQLDSRSKLRNVENLCLAGLDITDVSLKLIIKHMPSLSQLDLSYCNHITDQSV
NILTAAGTTTRDSLTHINLSVCNKVTDLSLTYFKRCGNICHIDLRYCKQVTKEGCEQFIA
EMSVSVQFRLIEEKLLSKLS
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgtgtgcggaatccggacgcaaactgcgctcgatctgcagaaggatgtacgat
gagaacgaggacttgtcagatgtggaggagatcacaaacatcaggggcttcagcgtggag
gacaaacttgagagcaattcatacaacagcgaatttgttcagtatatggagggaaaagat
ttttcttatgaatatgttcaaagagaggcactgcgaactccgctcatatttaaagccaaa
gatggactgggaattaggatgccggatccagaatttactgtaagtgaaatcaagggtttg
gttggcagcaggcgggctgttgacgtgatggacgttagcacacagaagggctccgagatg
agcatggcacagtttgtccgctactatgagacgcccgaggatgaacgtgacaagctgttc
aacgtcatcagcctggagttcagtcacaccaaactggagaatttaatcaagagacccact
gtggtggatctggtggattgggtggacaatatgtggccgcggcatcttaaacagaaacaa
accgaagccacaaatgtcatgtctgagatgaaatatcccaaagttcagagatactgtctg
atgagtgtaaaaggctgtttcactgacttccacatcgactttggcggcacatcagtatgg
taccatgtcttcaaaggaaggaaggtcttctggctgattcctccaagcccacacaatctg
tctctgtatgaggactgggtgctgtcaggcaaacagagtgatttcttcctgggtgaccgt
tcagacggctgtcagcgagtagagctgaaacagggctacacgttcttcatcccttcaggt
tggatccatgccgtctacactccagaagacaccctggtgtttggcggaaatattttacac
agttttaacattcccatgcagctcactgtctacgaaattgaaaacagaacaaaggtgaac
tccacattccgctaccctttcttctatgagatgtgctggtatgtgttggagaggtacgtg
aactgcttgaccagacgttcgcacctcagcctggagttccgcattcacgctgctgaaccc
aagcttgtaactgagagtcttgtctctgctcctcggctggacatggaggaggactcgtgt
gagacacggttagagaggacagaggggacgacccagccctcctccactgtccctccctat
cagaccttcaaatccccggccaatgattctgaagacagcttcaagtccctgccttcagag
tgtcccaagactccgtctggctcacctggaacagaacattccggcaaatggacccacttg
acagagtttgagctaaatggactcaaggccttggtggagaaactggaatcccttccggag
acaaagaaatgcgttccagagggcatcgaggatccacaagcactgctagatgacgtgaag
gttgtgttaaaggaacatgcagatgacaatccaaagttggccatcactggttctcctatt
gtatgctggccaaagaagacgggcaagccacggccgctcaatcggccaaaaacaaagatg
ggctcgtctccatcggctgctccaggctcaacagcaggaggagtgaagctctcgtccagt
cgcggttcatctagtgcccggcgcagacggacacgctgcaggaagtgcgaggcatgtatg
cgcaaagagtgtggcgaatgccacttctgcaaagacatgaagaagtttggtggaccaggt
cgcatgaagcagtcctgtatcatgagacagtgcatagcgcctgttctacctcacactgct
gtgtgtctggtgtgcggagaggctgggaaagaagacaccgtagagaatgaggaggacaag
ttcaacatgatgcttatggagtgctctatctgcaacgagatcatccatccaggatgcttg
aaggagaaggattctggcagtgttgtaaatgacgagttgccaaattgctgggagtgtcca
aaatgcaatcatgctggaaagactgggaaacaaaaaagaggcccagggtttaagtacgcc
tctaatctccctggctctctgctcaaagaccagcgaatgaaccgggatataaaggaagag
ccggaatcgaacatgtctacagagtcctacacctcaactgtttcacctgtcatgaagaag
aagacagaacgagaggacaaccctacctgcaagtcagaagacgcctttaagaaacgttct
cccaaattggaggacaacccactccgcaagaagagaaaactctttgaaaaggactcagac
tcagattccaatgtcaagaaaaagaagaagcgctcaaagcctgaagatctctcaacctct
aatgtcctgggacagataaagacagaaagagaggattatgaggataacagacaggaattg
gagaggagagatttcagttttgtgccctcagaagaagaggatggagatgatgaagaggag
gaggaagaagaagaggagacaatgaaggagaagagtagccgagaggagaatgggaagctt
gtgcacaagacctccactgtatgggaaggcgaccaatcacagggcggttttaaccaagca
gggcccagcagcgactcgggtgttgatacacagttgaggagccagcgaaaaaccaaacgc
aaacctcgtctacccaacaaagaactgagcaaagaactaagcaaacaacttaatcaggag
atccagaagacagaggattgtctggctcatcaaaatggcagggcggtgaagaccgaacca
gatagtgatggagaagtcagaaaaccactgaggaatggcagcagtcatctgagagactgg
ctgggacctaagcgggaactaaacggatccttgcgagagcaggtcccggttaactggatc
aggactacacctacccctgtcattcggccaacaccttgccgctctccaccgaaatgtgtt
cagatggagcgtcacgttattcgcccccctccgatcagcccccctccggatggcctgccc
ctagatgatgggaagaatcacgtcatgcagagagaggtgtggatggcagtgttcagccac
ctcacacaccaagacctctgtgtctgcatgcgggtctgcaagacctggaacagatggtgt
tgtgataaaagactgtggaccacgatcgatctgaaccggtgcaagtcaatcactccacta
atgctgagcggcattatccgcagacagccagtctccctggacctgagttggaccaacatc
tctaagaagcagctcagctggctaatcaacagattacctggtctgaggattctgttgctg
gcaggctgttcgtgggcagctgtatcagctttatgcacatctagttgtcctttgctaaga
actttagatgtgcagtgggtagagggactcaaggacaaccagataagagacttgctctcc
ccaccgacagacaacaggccaggtcagttggacagcagaagtaaactgaggaacgtggag
aatctctgtctagctggtctggacatcacagatgtgtccctgaagctgatcataaaacat
atgccttcactgtcccaattggaccttagttactgtaaccacatcaccgaccagagtgtg
aatatcctcacggcagccggcaccacgaccagagactctcttactcacatcaacctttca
gtttgtaacaaagttacagacttgtcgttgacctacttcaagcgctgcggaaacatttgt
cacatcgacctgcggtactgcaaacaggtgaccaaagagggttgtgagcagttcatcgca
gagatgtctgtcagcgtgcagttcagactgattgaagaaaaactactgagcaaactgagc
tag
DBGET
integrated database retrieval system
