Shewanella glacialimarina: FJ709_00660
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Entry
FJ709_00660 CDS
T07885
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sgla
Shewanella glacialimarina
Pathway
sgla01501
beta-Lactam resistance
sgla01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FJ709_00660
01503 Cationic antimicrobial peptide (CAMP) resistance
FJ709_00660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgla03036
]
FJ709_00660
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_00660
01504 Antimicrobial resistance genes [BR:
sgla01504
]
FJ709_00660
Chromosome and associated proteins [BR:
sgla03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FJ709_00660
Transporters [BR:
sgla02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FJ709_00660
Antimicrobial resistance genes [BR:
sgla01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FJ709_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
CusB_dom_1
HlyD_3
Biotin_lipoyl_2
Tail_tube
RibLong
DUF1344
Arabino_trans_N
OST_P2
DUF2103
SOAR
Motif
Other DBs
NCBI-ProteinID:
UCX03161
LinkDB
All DBs
Position
complement(157280..158428)
Genome browser
AA seq
382 aa
AA seq
DB search
MHKALKIAAVITATLWLTACGKQDEGAQAQQERPPTPVGVMVVTAQSQSIQVELPGRSKS
FLEAEVRPQVSGIITERGFIEGKEVTKGQSLYQIDSATYKAALVSAEADLASANAGLESA
KAKAARYQTLVKTNSVSVQDFDEAKAAYKEALASVTVAQAAINTAKINLEYTEVKAPIAG
RIGKSSVTAGALVTANQSSTLATIQQLDPINVDIAQSSVQLLRLKSKLKAGKLQKSDNAT
VTLILEDGTTYDQQGTMQFAEVSVDEATGSVTLRAEFPNPDGVLLPGMYVRARLDTGTDP
QAILVPQRAITRNTKGQAMAMIVNQDNNVEVRIVTTAEVIDNQWRIIDGLQAGDKLIVEG
LQKIRPGAAVSPQVLTEDTPQK
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagcattgaaaattgccgcagtgataactgcgacgttatggttaacagcctgt
ggcaaacaagacgaaggagcgcaggctcaacaagagcgcccacctactccggttggtgta
atggtagtgacagcacagtcacagtcgattcaagtagagctaccgggtcgcagtaaatcg
tttttagaagctgaagttcgtccacaagtgtctggtattattactgaacgtggatttatt
gaaggtaaagaggtcactaaaggtcaatctctttatcaaatcgattcagctacctataaa
gcggctttagttagcgcagaagctgatttagccagtgctaacgcaggtttagaatctgct
aaagcgaaagcggcgcgctaccaaacattggtaaaaactaattcggtcagtgtacaagat
tttgatgaagcaaaagccgcttataaagaagccttagcatctgtaaccgttgcgcaagcc
gctattaacacagctaaaatcaatcttgaatatactgaagtaaaagccccaattgcgggt
cgcataggtaaatcatcagtaacagcaggtgctttagtcaccgcaaaccaaagcagcact
ttggcgacgattcaacaattagaccctatcaatgttgatattgctcaatctagtgtgcag
ttattacgccttaaaagtaagctaaaagcgggtaagttacaaaaaagtgacaatgctact
gttacgctgattttagaagacggtaccacttatgatcagcaaggtacgatgcaatttgct
gaggtcagtgttgacgaggctaccgggtctgtcacattacgtgctgaattccctaaccct
gatggtgtactgttacctggtatgtatgtgcgtgcacgtttagatacaggtactgatcca
caagctattttagtgcctcaacgcgccattactcgcaataccaaaggtcaggcaatggct
atgattgttaatcaagataacaatgtcgaagtgcgtattgtcactactgctgaagtaatt
gataaccaatggcgcatcattgatggcctccaagctggcgataaattaattgtagaaggc
ttacaaaaaattcgtccaggtgcggcggtatcaccacaggtattaactgaagatactcca
caaaaatag
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integrated database retrieval system
