Shewanella glacialimarina: FJ709_14170
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Entry
FJ709_14170 CDS
T07885
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
sgla
Shewanella glacialimarina
Pathway
sgla01501
beta-Lactam resistance
sgla01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
FJ709_14170
01503 Cationic antimicrobial peptide (CAMP) resistance
FJ709_14170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sgla03036
]
FJ709_14170
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgla02000
]
FJ709_14170
01504 Antimicrobial resistance genes [BR:
sgla01504
]
FJ709_14170
Chromosome and associated proteins [BR:
sgla03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
FJ709_14170
Transporters [BR:
sgla02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
FJ709_14170
Antimicrobial resistance genes [BR:
sgla01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
FJ709_14170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
DUF4785_3rd
Motif
Other DBs
NCBI-ProteinID:
UCX05525
LinkDB
All DBs
Position
3242045..3243133
Genome browser
AA seq
362 aa
AA seq
DB search
MKKFIVFIILLTLPIAGFIISTNKQPQKNTRPERVIPVVTAMVDNHPLAQSVTLVGKLKA
KQSVFLAPQVNGKIADIKVKSNQYVEKGQILITLENAKAKANMTEAQAYYVDELRVQDEF
GRLIHVNAITQTEIEAQKAKVNVASARLAATSADLSYHDLTAPFSGNIGLINFSRGKMVN
AAETLLTLDDLSHLYLDLNIPEHYLSLLSTGMTIHATSRAWADKSFGGNVTAIDSRVNEE
TLNLTVRAEFSNTDGQLKPGMMMSAKIVFPSVSSPIVPVQALEYSGTKRFVYLIDKDNIA
QKTEVELGARIDNKVLINSGLNVGDHIVVQGLVNMRDGIKVNDLSGAKMTSDDRSTQLQE
LK
NT seq
1089 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatttatcgtttttattatcttgcttactctacctattgcaggatttattata
agtacaaataagcagcctcaaaaaaacactcgaccagagcgagttattcccgtggtaacg
gcaatggttgataatcatcctttagcacaatcggttaccttggtcggtaaattaaaagca
aagcagtcggtatttcttgccccacaggtcaatggaaaaatagccgacattaaagttaaa
tcaaatcagtatgtcgaaaaaggccagatattaattacattagaaaacgccaaagccaaa
gcaaatatgactgaagctcaagcatattatgttgatgaactcagagttcaagacgaattt
ggacgacttattcatgttaatgctatcactcaaactgaaattgaagcccaaaaagccaag
gttaatgttgcttcagctagactggctgctacaagtgctgatttaagttaccacgattta
acggctcccttttcaggcaatatcggcctaatcaatttcagccgcggaaaaatggtcaac
gcggctgaaaccttattaaccctcgatgatttgagccatttatacctcgacttaaatatt
cctgagcattatttatctttactcagtactggtatgactatccatgcaacaagtcgcgca
tgggctgataaaagctttggcggtaacgtaacggctatcgattcacgtgttaatgaagaa
accttaaatttgactgtcagagcagaatttagcaatacagatggccagctaaagcctggc
atgatgatgtcagctaaaatagtttttcctagtgtatcctcacctattgtgcctgttcaa
gcacttgaatactcagggactaagcgttttgtatacctcatagataaagataatattgct
caaaaaactgaagttgaacttggggctaggattgataataaagtactgattaatagtggg
ttaaatgttggcgaccatatagtcgttcagggcttagtaaatatgcgcgatggtatcaaa
gtgaatgacttgagtggcgcgaaaatgacttccgatgacaggtcgactcaacttcaggag
ctaaaataa
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