Sphingomonas glaciei: M1K48_12280
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Entry
M1K48_12280 CDS
T08593
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
sglc
Sphingomonas glaciei
Pathway
sglc01501
beta-Lactam resistance
sglc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1K48_12280
01503 Cationic antimicrobial peptide (CAMP) resistance
M1K48_12280
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sglc02000
]
M1K48_12280
01504 Antimicrobial resistance genes [BR:
sglc01504
]
M1K48_12280
Transporters [BR:
sglc02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
M1K48_12280
Antimicrobial resistance genes [BR:
sglc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
M1K48_12280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
SecD_SecF_C
ZT_dimer
Motif
Other DBs
NCBI-ProteinID:
UUR07694
LinkDB
All DBs
Position
complement(2495536..2498730)
Genome browser
AA seq
1064 aa
AA seq
DB search
MSFRNISAWCIRNPVPPIVLFIALLLTGIYAFATMEVTNNPDIDFPAANVTISQPGAAPS
EMVNQVTQKVEAAVRGVEGVDEINSDVREGNSNTFVQFKIGTPTDRAVNDVKAAIDQIRG
DLPDGILEPQVSRVNIGGDGFVFIAVEATDMSLEELSWYVDSLVSRRLLGQAGIAQVSRE
GGVDRQIRVILNPASLQSEGITAAQVNAQLRQINLDAPGGRAEIAGSEQTVRVLGNAKSA
TALADTQIALPGNRFVRLGEIAQVRDSSAEPRSATELDGRPVVSFNVARAKGASDVTAYE
NTWAELRKIEKEDPRIRFVEINNSVDYTKSQYKSSMSALLEGAVLAVLVVFIFLRDIRAT
LISAVAIPLSAIPAFWFMDLMSINLNFLSLLALGLVAGVLVDDAIVEIENIVRHMRMGKS
AYQASIDAADEIGLAVLATTMSIVAVFLPVALMPGISGQFFRNFGYTVVLAVFMSLLVAR
MITPLMAAYFLRSGGIQEHASGKWMERYLNTLRWSIDHDKADAAKDRARGFFGRRLARFR
DHRVWMMGVGFAIFGATIIGIMTLPMTFQPEQDQPNSSIRIGLAPGTTLDQTKSVAARVR
EIVLRNPNVENVFQRSFTSSAFLNVVYKKDREKKSFEIEREITPQLASIADARVNFNSQG
GGGPGSGGRPISLYLGGDDPVKIADAANKIAEEMQTIPTLVAPRVAGDVVRPEIRINPRF
DLAADLGVSTSSLAQTIRIATIGDIDQNSARFSLSDRQVPIIVSLDRSERRDISTLENLP
VPTASGGSVPLKSVAEISFGSGPVTVNRTNQMYRIAIGADLTPGTISGDAWKQIDKLPTL
QNLPAGVQRLQLGDQKWQQELIFNFVLAVLAGIALVFAVLVLLYRRFLAPLVNLGSLLLA
PLGAVVALHVAGMPLSLPVFIGLLMLLGIVAKNSILLVDFAVEMMDHGMTKDEAIVEAGH
KRAQPIVMTTVAMVAGMVPIALSLTGDGSFRSPMGVTVIGGLLLSTFLTLLLVPAYFSLA
IDIETWFGRKFGRHLSATAHEMPGEEADGRSQRPPGSPVPQPAE
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccggaacatttcggcctggtgcatccgcaacccggtccctccgatcgtgctc
ttcatcgcgttgctgctgacgggcatctacgcctttgcgacgatggaggtcaccaacaac
ccggacatcgacttcccggcggccaacgtcaccatctcgcagcctggcgccgctccgtcc
gagatggtcaaccaggtcacccagaaggtcgaagcggcggttcgcggggtcgagggcgtc
gacgagatcaattcggacgtccgcgaaggcaacagcaacaccttcgtccagttcaagatc
ggcactccgaccgaccgtgcggtcaatgacgtcaaggcggcgatcgaccagatccgcggc
gaccttcccgacggcatcctcgagccgcaggtcagccgagtgaacatcggcggcgacggc
ttcgtgttcatcgcggtcgaagcgaccgacatgagcctggaagagctcagctggtatgtc
gacagcctggtgtcgcgccgcctgctgggtcaggccggaatcgcccaggtgagccgcgaa
ggcggcgtcgaccgccagatccgcgtcatccttaatcccgcctcgctccagtcggaggga
atcaccgcggcgcaggtcaatgcgcagctgcgccagatcaatctcgacgccccgggtggc
cgcgctgagatcgccggatccgagcagacggtgcgcgtgctcggcaacgccaagagcgcc
acggcactggccgacacccagatcgccctgcccggaaaccgttttgtccgcctcggcgag
atcgcccaggtccgcgattcctcggccgaaccccgctccgccaccgaactcgacggccgt
ccggtggtcagcttcaacgtcgcccgcgccaagggcgcctcggatgtcaccgcctacgag
aatacctgggccgagttgcgcaagatcgagaaggaggatccgcggatccgcttcgtcgag
atcaacaacagcgtcgattacaccaagagccagtacaagagttcgatgtcggcgctgctc
gaaggcgcggtgctggcagtgctggtcgtcttcatcttccttcgcgacatccgcgcgacg
ctgatctcggcggtcgccatcccgctctccgcgatccccgccttctggttcatggacctc
atgtccatcaacctgaacttcctctccctgctggccctgggcctggtggcgggcgtgctg
gtcgacgacgcgatcgtggagatcgagaacatcgtccgccacatgcggatgggcaagagc
gcgtaccaggcgtcgatcgacgccgcggacgagatcggcctcgccgtgcttgcaaccacc
atgtcgatcgtcgcggtgttcctgccggtcgcgctgatgcccggcatctccggccagttc
ttccgcaacttcggctatacggtcgtgctggcggtgttcatgagcctgctcgtggcgcgc
atgatcacgccgctgatggcggcctatttcctgcgcagcggcggcatccaggaacatgcc
tcgggcaagtggatggagcgctatctcaacacgctccgctggtcgatcgaccacgacaag
gccgatgccgcgaaggaccgtgcgcgcggcttcttcgggcgccggctggcgcgcttccgc
gatcaccgcgtgtggatgatgggcgtcggcttcgcgatcttcggcgccaccatcatcggc
atcatgaccctgccgatgaccttccagccggagcaggatcagccgaacagctcgatccgg
atcggcctcgccccgggcaccacgctcgaccagaccaagtcggtcgccgcccgggtgcgc
gagatcgtcctgcgcaatccgaacgtcgagaacgtcttccagcgcagctttacctcgtca
gcgttcctcaacgtcgtctacaaaaaggaccgcgagaagaagagcttcgagatcgagcgc
gagatcaccccgcagctggcctcgatcgccgatgcccgggtcaacttcaacagccagggc
ggcggcggcccgggcagtggcggacgacccatttcgctctatctcggcggcgacgatccg
gtgaagatcgccgatgcggcgaacaagatcgcggaggagatgcagaccatcccgacgctg
gtcgcgccgcgcgtggcgggcgacgtcgtgcgtcctgaaatccggatcaatccgcgcttc
gacctggccgccgacctgggggtcagcacctcgtcgctggcgcagacgatccgcatcgcg
accatcggcgacatcgaccagaacagcgcccgcttctcgctgtccgaccgccaggttccg
atcatcgtcagcctcgaccgctccgagcggcgggacatctcgaccctcgagaacctgccc
gttccgaccgccagcgggggatcggtgccgctcaagtcggtggccgagatcagcttcggt
tcgggcccggtgacggtgaaccgcaccaaccagatgtaccgcatcgcgattggcgccgac
ctgacgcccggcacgatcagcggcgacgcctggaagcagatcgacaagctgccgactctt
cagaacctgccggccggcgttcagcgcctgcaactgggcgaccagaaatggcagcaggag
ttgatcttcaatttcgtcctggcggtgctggccggaatcgcgctggtgtttgcggtgctg
gtgctgctctaccgccgcttcctcgcgccgttggtcaacctcggttcgcttctgctggcc
ccgctgggcgcggtggtcgcgctccacgtcgcgggcatgccgctcagcctgccggtcttc
atcggcctgctgatgctgctcggcatcgtcgccaagaactcgatcctgctggtcgatttc
gcggtggagatgatggaccatggcatgaccaaggacgaggcgatcgtagaagccgggcac
aagcgcgcccagccgatcgtcatgaccaccgtcgcgatggtcgccggcatggtcccgatc
gcgctcagcctgaccggcgacggcagcttccgctcgccgatgggcgtgacggtgatcggc
ggcctgctgctgtcgaccttcctgaccctgctgctcgtcccggcctatttcagcttggcg
atcgacatcgagacctggttcggacgcaagtttggccgtcacctcagcgccaccgcgcac
gaaatgccgggcgaggaagccgatggccgctcgcagcgccccccgggatcccccgttccg
caaccggcggagtga
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