Scandinavium goeteborgense: A8O29_000530
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Entry
A8O29_000530 CDS
T06630
Name
(GenBank) efflux RND transporter permease subunit
KO
K18142
multidrug efflux pump
Organism
sgoe
Scandinavium goeteborgense
Module
sgoe_M00696
Multidrug resistance, efflux pump AcrEF-TolC
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sgoe02000
]
A8O29_000530
01504 Antimicrobial resistance genes [BR:
sgoe01504
]
A8O29_000530
Transporters [BR:
sgoe02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
A8O29_000530
Antimicrobial resistance genes [BR:
sgoe01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
A8O29_000530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
DUF7697
Motif
Other DBs
NCBI-ProteinID:
QKN79842
LinkDB
All DBs
Position
pSg66741_1:complement(100823..103936)
Genome browser
AA seq
1037 aa
AA seq
DB search
MSKFFITRPIFAWVLAILLMLAGGLAIMKLPVAQYPTIAPPAVAITAVYPGADAKTVEDT
VTQVIEQKMNGIDNLMYMSSVSDSTGAVTITITFNSSADPDIAQVQVQNKLQLAMPLLPQ
EVQQQGINVQKSSSSFLLVAGFVSDDPSATQEDITDYVASNIQDSISRLNGVGAVQLFGA
QYAMRIWLNADSLNKYQLTPVDVINQLKVQNNQIAAGQLGGAPSIANQQLNASIIVQTRL
KDMKEFGNILLKVNSDGSQVRLKDIARIGLGGENYNTVAKINGKVASGLGIKLATGANAL
DTANAIKAKLNDLQPYFPQGLQTVYPYDTTPFITISISEVVKTLLEAIVLVFLVMYLFLQ
NLRATLIPTIAVPVVLLGTFAVLETCGYSINTLTMFGMVLAIGLLVDDAIVVVENVERVM
VEEGLPPKEATLKSMEQIQGALVGIATVLSAVFVPMAFFGGSTGAIYRQFSITIVSAMAL
SVLVALILTPALCATLLKPVAKGSHAVQTGFFGWFNEKFEKSTNHYTDSVQKILRKTGRY
LLLYVGILVAMVVLFIRLPTSFLPDEDQGVFMTMVQLPSGATQARTQKVLDQVSNYYLTK
EKANVRSVFTVNGFSYSGQGQNTGLAFVSLKSWDEREGKQNGVKAIIGRANRTFSQIKDG
IVIGFNLPAIIELGTATGFDFELIDKANLGHQALTQARNQLLGMIKQRPDALTRVRPNGL
EDTPQFKLDIDQEKAQALGISLTDIDQTVSSALGGSYVNDFIDRGRVKKVYVQGDAPFRM
LPDDINNWFVRGTDGQMVPFNAFSEAHWMTGSPRLERFNGLPSMEILGEAAPGKSTGEAM
LMIESMAAKLPAGVGYDWTGMSYQERLSGDQAPALYGISLLIVFLCLAALYESWSVPFSV
MLVVPLGVVGALLAASLRGLNNDVYFQVGLLTTIGLSAKNAILIVEFAKDLMEKERKELM
EAILEASRMRLRPILMTSLAFILGVLPLVISTGAGSGAQNAVGTGVMGGMLTATLLAIFF
VPVFYVVVQRRFGMQKN
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaattctttatcactcgccctattttcgcgtgggtgctggcgattttactaatg
ctggccggtgggctggcgataatgaaactaccggttgcacaatacccgacaattgctcca
cctgcggtagccattacagccgtttatccaggggctgacgccaagactgtagaggataca
gtcacgcaggttatcgaacaaaaaatgaatggtatcgacaacctgatgtatatgtcatca
gtgagtgattccacaggggctgttactattacgatcacctttaattcctcggccgatccg
gacattgcccaggttcaggtgcagaacaaacttcagctggccatgccactcttgcctcaa
gaagtgcaacagcagggaatcaacgttcagaaatcaagtagtagttttctactggttgct
ggctttgtttccgacgatccttcagcgactcaagaagatattaccgattatgttgcttca
aatatccaggattccatcagccgactgaatggtgttggtgcggtacagcttttcggcgca
cagtacgctatgcgcatctggctaaatgcagattcattgaacaaatatcagctcacgccg
gtggatgtgattaatcagcttaaggttcaaaataaccaaattgcggccggacaactcggc
ggggcgccatcgatagccaatcagcagcttaatgcatcgattattgtccagactcgcctc
aaagatatgaaagaatttggcaatattttgctgaaggttaatagcgatggttcacaggtc
cgcctgaaggacattgcccgcattgggctgggtggcgagaactataataccgtggccaaa
attaatggcaaagtggcatccggattggggattaagcttgcaacgggtgctaatgcgctg
gataccgctaatgctatcaaagcaaaactcaacgatctgcaaccttactttccgcagggg
ctgcagacggtttacccttacgataccacgccgtttattaccatctcgatcagcgaagtc
gtgaagacgctattggaagcaatcgtactggtattcctagttatgtatttgttcctgcaa
aaccttcgcgccacgcttattccgacaatagccgttcccgtggttctgcttggtactttt
gcggtactggaaacctgtggttactccataaataccttaacgatgtttggcatggtgctg
gcaataggtctacttgtcgatgatgcgattgttgtggtggaaaacgttgaacgcgtgatg
gttgaggaaggactccctccgaaagaggcgacgttaaaatcgatggaacaaattcagggg
gcattggtcggtattgcgactgtactctcagcggtgtttgtgccgatggctttcttcggc
ggatccaccggggctatttatcgccagttttccataaccattgtatccgcgatggcgttg
tcggttctggtagcattaattttaacgcctgcattgtgcgccacgctcctcaagccagta
gcaaaaggtagccacgctgtgcaaaccggtttttttggttggtttaacgagaaattcgaa
aagagcacaaatcattacaccgatagcgtgcagaaaatcctgcgcaaaactgggcgttac
ctcttgctgtatgtggggatccttgtggcgatggtggtactatttatacgtttgccaaca
tcatttctaccggatgaggaccagggcgtttttatgacgatggtccagctcccgtcgggt
gcaacacaggcccgaacgcagaaagtgcttgatcaggtatcgaattactatttgacaaaa
gaaaaagcgaacgtccgttctgtatttacagtgaatggctttagttatagcggccagggg
caaaatacaggccttgcgtttgtcagccttaaatcgtgggacgaacgtgaaggtaaacaa
aatggggtgaaagccatcattgggcgggcgaatagaaccttctctcaaatcaaagatggt
attgttattggttttaacctaccggcaattatcgagttaggcactgcgacaggttttgac
ttcgaactgattgataaagcgaaccttggacatcaggcgctaactcaggctcgtaaccaa
ttattggggatgattaagcagcgccctgatgcgctcacccgagtgcgtccgaatggactt
gaagacacaccacaattcaagctagacatcgatcaagaaaaagcacaggccttggggata
tcgctgactgatatcgatcagaccgtttcttctgcgttgggcgggagttatgtgaatgat
ttcattgaccgtggacgtgtgaaaaaagtttatgtgcagggtgatgcgccatttcgaatg
ttacccgatgatatcaataactggtttgtgcgtggaacagacggacaaatggttccattc
aatgcgttctcggaagcgcactggatgacgggctcgccgcgtcttgaacgctttaacggc
ttgccatcaatggaaatcctgggtgaagccgcgccaggaaaaagtaccggagaagcgatg
ctgatgattgagtcaatggcggcgaaattacccgcaggtgttggatacgactggacgggc
atgtcatatcaggaaaggttatctggcgatcaagcgcctgctctgtatggtatttcgtta
ttgatcgtcttcttgtgcctggccgcactttatgagagctggtctgttccattctcggtg
atgttagttgtgccactgggcgtggttggcgcattgcttgcggccagcctgcgtgggttg
aataacgacgtttacttccaggttggcttactgaccaccattggcctgtcagcgaaaaat
gccattttaatagtcgagtttgctaaagatctaatggagaaagagagaaaagagttgatg
gaagctattcttgaagcttctcgtatgcgtttacgaccaattctgatgacgtcattagcc
tttattttaggtgtattaccgttggttatcagtactggcgcaggctccggcgcacaaaac
gctgtgggcaccggggttatggggggaatgctcaccgctactttgcttgcaatcttcttt
gttcccgttttctatgtcgtggtacagcgcagattcggtatgcaaaaaaattaa
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