Scandinavium goeteborgense: A8O29_015275
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Entry
A8O29_015275 CDS
T06630
Symbol
rlmC
Name
(GenBank) 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
KO
K03212
23S rRNA (uracil747-C5)-methyltransferase [EC:
2.1.1.189
]
Organism
sgoe
Scandinavium goeteborgense
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgoe03009
]
A8O29_015275 (rlmC)
Enzymes [BR:
sgoe01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.189 23S rRNA (uracil747-C5)-methyltransferase
A8O29_015275 (rlmC)
Ribosome biogenesis [BR:
sgoe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A8O29_015275 (rlmC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
MTS
Methyltransf_25
Methyltransf_4
Cons_hypoth95
Methyltransf_15
Methyltransf_12
Methyltransf_11
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QKN82585
LinkDB
All DBs
Position
complement(2999682..3000809)
Genome browser
AA seq
375 aa
AA seq
DB search
MQCALHDAGRCRSCQWLEQPVSQQLAAKMADLQQLLSSSTVEEWCAPVSGPETGFRNKAK
MVVSGSVEKPLLGMLHRDGTPEDLCDCPLYPASFAPVFTALKPFIARAGLTPYNVARKRG
ELKYLLLTESQLDGGMMLRFVLRSDAKLEQLRAALPSLQAQLPQLKVISVNIQPVHMAIM
EGEQEIFLTDQQALAERFNDVPLWIRPQSFFQTNPTVARELYATARNWVRALPVQHMWDL
FCGVGGFGLHCATPEMQLTGIEISAEAIACANESAAELGLQNLHFQALDSTQFATDQGSV
PELVLVNPPRRGIGNALCDYLSDMAPPFIIYSSCNAQSMAKDFSHLPDYRVARVQLFDMF
PHTAHYEVLTLLIRR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgcgcactccatgatgccggacgctgtcgttcctgtcagtggctcgaacagccg
gtatcccaacagcttgccgccaaaatggcggatcttcagcaactgctgtcgtcttcgacg
gtagaagagtggtgcgcgccggttagcggcccggaaacgggttttcgtaacaaagccaaa
atggtggtcagcggtagcgtcgaaaaaccactgctcgggatgctgcatcgcgatggtact
ccggaagatttatgcgactgcccgctatatcccgcctcgtttgccccggtatttaccgcc
ctgaaaccgtttatcgcccgtgcgggcctgacgccgtataacgtcgcgcgtaaacggggc
gagctaaaatatctgctgctgaccgaaagccagctcgacggcggaatgatgctgcgcttt
gttctgcgctctgacgccaaactggaacagctgcgcgcggcgctgccgtcattacaggct
cagttgccgcagctcaaagtgatttcagtgaatatccagccggtgcacatggcaatcatg
gaaggcgagcaggagattttcctcactgaccagcaggcgctggccgagcgtttcaacgac
gtgccgctgtggatccgcccgcaaagtttcttccagactaacccgacggtggcgagggaa
ctgtatgccaccgcgcgcaattgggtgcgagccttaccggttcagcatatgtgggatctc
ttttgcggcgtgggcggttttgggttgcactgcgccacaccagaaatgcagctgaccggg
atagaaatctcagcggaagccattgcttgtgcgaatgagtcggcagcggaactgggacta
cagaatctgcattttcaggcgctcgattccacgcagtttgcgaccgatcagggcagcgtg
ccggagctggtgctggtgaatccgccgcgccgtgggattggcaacgcgttatgcgactat
ctcagcgacatggcgccgccgtttattatctattccagttgtaacgcgcagtcgatggcg
aaagatttcagtcatctgccggattaccgggtggcgcgcgtgcagctgtttgatatgttc
cctcacactgcgcattacgaagtgctgacgctgttgattcgacgttaa
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