Scandinavium goeteborgense: A8O29_019120
Help
Entry
A8O29_019120 CDS
T06630
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K02535
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:
3.5.1.108
]
Organism
sgoe
Scandinavium goeteborgense
Pathway
sgoe00540
Lipopolysaccharide biosynthesis
sgoe01100
Metabolic pathways
Module
sgoe_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sgoe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
A8O29_019120 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgoe01005
]
A8O29_019120 (lpxC)
Enzymes [BR:
sgoe01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
A8O29_019120 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
sgoe01005
]
Lipid A
A8O29_019120 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
Motif
Other DBs
NCBI-ProteinID:
QKN83298
LinkDB
All DBs
Position
complement(3830408..3831325)
Genome browser
AA seq
305 aa
AA seq
DB search
MIKQRTLKRIVQATGVGLHTGKKVTLTLRPAPANTGVIYRRTDLNPPVDFPADAKSVRDT
MLCTCLVNEHDVRISTVEHLNAALAGLGIDNIMIEVDAPEIPIMDGSAAPFVYLLLDAGI
DELNCAKKFVRIKDTVRVEDGDKWAEFKPFNGFSLDFTIDFNHPAIDGSNQRYAMNFSAD
AFMRQISRARTFGFMRDIEYLQSRGLCLGGSFDCAIVVDDYRVLNEDGLRFEDEFVRHKM
LDAIGDLFMCGHNIIGAFTAYKSGHALNNKLLQAVLAKQEAWEFVTFEDDAELPLAFKAP
SLVLA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacaaaggactcttaaacgtatcgttcaggcgactggtgtcggtttacatact
ggcaagaaggtcacactgacgctgcgccctgcgccggcaaataccggggtcatctatcgt
cgcaccgacttgaatccaccggttgattttccggcagatgccaaatctgtgcgtgatacc
atgctctgtacttgccttgtcaacgagcatgacgtgcggatttcaacggttgagcactta
aatgccgccctggcgggtctgggtatcgacaacatcatgattgaagtcgatgcgcctgaa
atcccgattatggatggcagcgctgccccgttcgtttatctgctgctcgacgcaggcatt
gatgaactgaactgtgcgaagaaatttgtgcgcattaaagacacggttcgcgtagaagac
ggcgacaaatgggctgaattcaaaccgtttaatggtttctcgttggatttcaccatcgac
tttaaccatccggcgattgacggcagcaaccagcgttatgctatgaacttctctgcggat
gcgttcatgcgtcagattagccgagcacgtacttttggtttcatgcgtgatatcgaatat
ctgcagtcccgtggtttgtgcctgggcggcagcttcgattgtgccatcgttgttgacgat
tatcgcgtactgaacgaagacggtttgcgctttgaagatgaatttgtacgccacaaaatg
ctggatgctatcggtgacctctttatgtgtggtcacaatatcatcggtgcattcaccgcg
tacaaatcaggtcacgcactgaataataaactgctgcaggcagtcctggccaaacaggaa
gcctgggagtttgtgaccttcgaagacgacgctgaactgccactggcattcaaagcaccg
tcattggttctggcgtaa
DBGET
integrated database retrieval system
