KEGG   Sporisorium graminicola: EX895_001307
Entry
EX895_001307      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K11086  small nuclear ribonucleoprotein B and B'
Organism
sgra  Sporisorium graminicola
Pathway
sgra03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    EX895_001307
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgra03019]
    EX895_001307
   03041 Spliceosome [BR:sgra03041]
    EX895_001307
   03032 DNA replication proteins [BR:sgra03032]
    EX895_001307
Messenger RNA biogenesis [BR:sgra03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     EX895_001307
Spliceosome [BR:sgra03041]
 Complex A
  U1 snRNP components
   Sm proteins
    EX895_001307
  U2 snRNP components
    EX895_001307
 Complex B
  U1 snRNP components
    EX895_001307
  U4/U6.U5 tri-snRNP components
    EX895_001307
 Complex C
  U2 snRNP components
    EX895_001307
DNA replication proteins [BR:sgra03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     EX895_001307
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 40724202
NCBI-ProteinID: XP_029741507
UniProt: A0A4U7L2K2
LinkDB
Position
SGRAM_11:join(8142..8522,8668..8942,9061..9088)
AA seq 227 aa
MPPTKPKGGKMMSLINYRLRITLNDSRQIVGQLLAFDAHMNLVLADSQEYRKIKSRKAKA
KAAAASKAANASVEDAEDDEDAPASAGAPDAILEQKRTLGLLILRGENIVSMAIEAPPPA
DDRKQATMQPGPGKGAPMGRGMGLAVPPMAGAPPPMMARPMPYARPPPGMPGMPVPPPGM
PVGPPPGFRPPGFPGMPGGPPPGFPVAPPGGFPPRPPPGFGMPPRPQ
NT seq 684 nt   +upstreamnt  +downstreamnt
atgcctcccacaaagcccaaaggcggcaagatgatgtcgctcatcaactacaggctccgc
atcacgctcaacgactcgcgccagatcgtcggccagctcctcgcattcgacgcacacatg
aatctcgtcctcgccgactcacaggaatatcgcaagatcaagtccagaaaagcaaaggct
aaagcagcagcggctagtaaagcggcaaatgccagtgtcgaggacgctgaagacgacgag
gacgcaccggcatccgcaggtgctcccgatgccattttggagcagaagcggacattgggt
ctgctcattctgcgtggtgaaaacatcgtcagcatggctatcgaggcgcctccgccggcg
gatgacaggaaacaagcgactatgcaacccggtcccggaaaaggcgcgcccatgggccga
ggaatgggtctggcagtgccgcccatggctggagccccacctcctatgatggctcgaccc
atgccctacgcaagaccacctcccggtatgcctggtatgcccgttccacctccaggcatg
cctgtgggcccacctcctggtttccgtccacctggctttcccggcatgcccggcggtcca
cctccgggcttccccgtcgctccaccaggaggtttccctccgcgtcccccgcccggattc
ggtatgccgccccgaccacaatga

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