Sporisorium graminicola: EX895_001812
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Entry
EX895_001812 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
sgra
Sporisorium graminicola
Pathway
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_001812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_001812
Spliceosome [BR:
sgra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EX895_001812
Complex C
U5 SnRNP specific factors
EX895_001812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
EFG_III
MMR_HSR1
GTP_EFTU_D2
Ras
Roc
ATG43
EFL1
SRPRB
Septin
Motif
Other DBs
NCBI-GeneID:
40724707
NCBI-ProteinID:
XP_029741266
UniProt:
A0A4U7KX11
LinkDB
All DBs
Position
SGRAM_12:739051..742038
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AA seq
995 aa
AA seq
DB search
MDDYDEFGNYIGPLSDSELGSEDEYAQQPEEDAPPPLEQPAPLEGYDDGEDEERLANMEL
DDEGNIIPQRALIRVDESVSNAVVLHEDKQYYPSASEVYGEDVETMVQEEDAQPLSVPIV
EPVKIRRFAVQEHGLPETRFDRSFLSSLMGFPDMVRNVAVVGHLHHGKTSLLDTLVYETH
KHEVDMDTHMRYTDAHLLERDRGISVKSAPLSLVLEGTKRKSYLLNLIDTPGHTNFQDEV
AAACRLADGVVLVVDVVEGVMCNTVHIVRHCMRQQLPIVLVLNKLDRLVLELRLPPNEAY
YKIRHAIQEVNNCIASFDANPALQLGPERGNVAFASTQMGYCFTLRSFAKLYAETYGAGI
DVDAFAQRLWGNIYYNPESRNFSRKAPDAESKRSFVHFILEPLYKIYSAVLSSDTDSLKR
TLASLGIHLKPAVYKVDVRPLLRIVLNQFFGPSQGLVDLVVDNVPSPKEAAAQRLRRCYT
GPQEGVIHEGMVACDAEAPLVVQVTKLYQTIDAQEFRAFGRVMSGTARPGMRVKVLGEGF
SQDDEEDMALATIEDVGINETRYVVPTEGVPAGNWVLLSGIDASLSKTGTIVDANLPTED
LHIFAPLEHMTQSVLKVSVEPLNPSELPKMLEGLRRINKSYPLAVTKVEESGEHVIMGTG
ELYLDCVLHDLRVLFSEIEIRVSDPVVRFCETVVETSAVKCYASTPNKKNKLTIICEPLE
KGVAEDIEAGVLDIKMPPKQLGKLLQEKYGWDLLASRSVWAFGPDERGANILVDDTLPSE
VDKKLLYAVKESIAQGFQWGCREGPLADEPIRNVKFRILDAELAAEPIHRGGGQIIPTAR
RACYAAFLMATPRLMEPIYEVEVQTPASGIAAVYTILAKRRGHVVKDTPKPGSTLFTVQA
YIPVIDANGFETDLRIATQGQAFALMMFSHWSIVPGDPTDASIKLRPLEPAPPLGLAKDF
VVKTRRRKGLPENVAVASYLDAEMTVALAQTGIEM
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacgacgagtttggaaactacataggtccgctttctgactctgagctcggc
tcagaagatgagtacgcgcagcaacctgaagaagacgcgccaccaccgctagagcaaccc
gcaccactcgaaggttacgacgatggcgaggacgaagagcgtctcgcaaatatggagctc
gacgatgagggcaatataattccacagcgtgccttgatacgcgtcgacgaatctgtgtcc
aacgccgttgtgctgcatgaggacaaacagtactacccatctgcctccgaagtctatggc
gaagatgtcgagaccatggtgcaggaggaagacgcacaacccctttccgtgcccatcgtc
gaaccggtcaagatccgtcgcttcgccgtacaagagcacggcctgccagaaacacgattt
gacagaagttttctatccagcctcatgggtttcccagatatggtaaggaacgtagcagtg
gtggggcacttgcatcacggcaagacaagcttgttagatacactggtctacgaaacgcac
aagcacgaggtggacatggacacgcatatgcgctacaccgacgcgcacctcttggaaaga
gaccgaggtatctcggtcaagtccgcaccgctctcgctcgtcttggaaggcacaaagcgc
aagtcgtaccttctcaacctcatcgacacgccaggacacaccaacttccaggacgaggtc
gccgcagcatgtcgtctggccgacggagtcgtgctcgtcgtcgacgtcgtcgaaggcgtc
atgtgcaacacagtccacatcgtccgtcactgcatgcgtcagcagctccccatcgtgctg
gtgctcaacaagctagaccgtctcgtgctcgagctgcgcctgccacctaacgaagcatac
tacaagatccgacacgcgattcaagaggtcaacaattgcattgcgtcctttgacgccaac
ccggcactgcagctcggccctgaacgcggcaatgtggctttcgcgtccacgcagatgggc
tactgttttacccttcgcagctttgccaagctgtacgcagagacgtatggtgccggtatt
gacgttgatgcctttgctcagcgtctgtggggcaacatctactacaaccccgagtcgcgc
aatttctcccgaaaagcaccagacgcagagagcaagaggtcgttcgtgcatttcatcctc
gaaccgctgtacaagatctactcggccgtcctgtcttccgacaccgactcgctcaagagg
acgctggcgagtttgggcatacatctcaagccggccgtatacaaggtggatgtgcgcccc
ctgctcaggatcgtcttgaaccagttctttgggccgtcgcaagggttagtcgatctggtg
gtggacaacgtgccttcgccgaaggaggctgcagcgcagcggttgcggagatgttacaca
ggtccgcaggagggggtgattcacgagggcatggtggcgtgcgatgcggaggcgccgctc
gtggtccaggtgaccaagctgtaccagacgatcgacgcgcaagagttccgcgcgtttggt
cgtgtcatgtctggcactgcgcgtccagggatgcgcgtcaaagtgctcggtgaaggcttt
tcgcaagacgacgaggaagacatggcgctagccactattgaagatgtcggcatcaacgag
acgcgctacgtcgtccccaccgagggcgtaccagcggggaactgggtgctgctctcaggt
atcgatgcgtccctctccaaaacaggcaccatcgtcgatgccaacctccccaccgaggac
ttgcacatcttcgccccgctcgaacacatgacacagtcggtgctcaaagtgtcggtcgaa
ccacttaacccttccgagctgcctaagatgctcgaaggtctgcgccgcatcaacaaaagc
tacccactggccgtgaccaaggtggaagagtcgggcgagcacgtcatcatgggcacgggc
gagttgtacctcgactgcgtgctgcacgacctgcgtgttctgttctccgagatcgagatc
cgcgtgagcgatcccgtggtgcgcttctgcgagacggtggtggaaacgtcggcggttaag
tgttacgcatcgacgccgaacaagaagaacaagttgacgatcatttgcgagccgctggag
aagggggtcgcggaggacatcgaggctggggtgttggatattaagatgccacccaagcaa
ttgggcaaactgttgcaggaaaagtacgggtgggatctgctggcaagtcgaagcgtgtgg
gcattcgggccggatgagcgcggggcgaacatcttggtcgacgacacgctgccctccgag
gtggacaagaagctgctgtacgccgtcaaggagagcatcgcacaggggttccagtggggg
tgcagggagggtccgctggcagatgaaccgatccgcaacgtcaaattccgcattctcgat
gccgagctcgccgccgagccgatccacaggggaggcgggcagatcatccctaccgcgcga
cgcgcttgctacgcggccttcctcatggccactccgcgcctcatggagccgatctacgaa
gtagaggtgcagacccccgcctcgggcattgcggccgtctacacgatcctcgccaaacgc
cgcgggcacgtggtcaaggacacgcccaagcccggatcaacgctgttcaccgtgcaggcg
tacatccccgtcatcgacgccaacggcttcgagacggatctgcgtatcgctacgcagggc
caagcatttgcgctcatgatgttcagccactggagcattgttcccggtgacccgacggat
gcatcgatcaagctgagaccgctcgagcccgcgccgccgctggggttggccaaggacttc
gtggtcaagacgaggagacgcaagggtttgcccgaaaacgtggcggtggcgtcgtacttg
gatgccgagatgacggtcgccttggctcagactgggattgagatgtag
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