Sporisorium graminicola: EX895_001962
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Entry
EX895_001962 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K07936
GTP-binding nuclear protein Ran
Organism
sgra
Sporisorium graminicola
Pathway
sgra03008
Ribosome biogenesis in eukaryotes
sgra03013
Nucleocytoplasmic transport
sgra03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EX895_001962
03008 Ribosome biogenesis in eukaryotes
EX895_001962
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
EX895_001962
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgra03019
]
EX895_001962
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_001962
03016 Transfer RNA biogenesis [BR:
sgra03016
]
EX895_001962
03036 Chromosome and associated proteins [BR:
sgra03036
]
EX895_001962
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgra04147
]
EX895_001962
04031 GTP-binding proteins [BR:
sgra04031
]
EX895_001962
Messenger RNA biogenesis [BR:
sgra03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EX895_001962
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
EX895_001962
Pre-60S particles
EX895_001962
Transfer RNA biogenesis [BR:
sgra03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
EX895_001962
Chromosome and associated proteins [BR:
sgra03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
EX895_001962
Spindle formation proteins
EX895_001962
Exosome [BR:
sgra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EX895_001962
GTP-binding proteins [BR:
sgra04031
]
Small (monomeric) G-proteins
Ran Family
Ran
EX895_001962
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
Gtr1_RagA
G-alpha
MMR_HSR1
GTP_EFTU
Pox_A32
DUF5118
AAA_7
AAA_16
AAA_24
DUF5906
TsaE
Septin
AAA_22
ATPase
Motif
Other DBs
NCBI-GeneID:
40724857
NCBI-ProteinID:
XP_029741416
LinkDB
All DBs
Position
SGRAM_12:1189621..1190274
Genome browser
AA seq
217 aa
AA seq
DB search
MSAENQEIPQFKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLQFHTNFGTIC
FNVWDTAGQEKFGGLRDGYYIQGQCGIIMFDVTSRITYKNVPNWHRDLERVCENIPIVLC
GNKVDVKERKVKTGAVTFHRKKNLQYFEISAKSNYNFEKPFLWLARKLVGNPTLEFAAAP
ALAPPEVQVDQALMAQYDAELQRAAAAPLPDEDDGDL
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccgagaaccaggagatcccccagttcaagctcgtcctcgtcggtgacggtggt
acgggcaagaccactttcgtcaagcgtcacttgaccggagagtttgagaagaagtacatc
gccacgctcggtgtcgaggtgcaccctctccagttccacaccaacttcggtaccatctgc
ttcaacgtctgggacactgcgggacaggagaagttcggcggtctccgtgacggctactac
attcagggccagtgcggtatcatcatgttcgatgtgacttcgcgcatcacctacaagaac
gtgcccaactggcaccgtgacttggagcgcgtttgcgagaacatccccatcgtgctctgc
ggtaacaaggtcgacgtcaaggagcgcaaggtcaagaccggcgccgtcaccttccaccgc
aagaagaacctccagtacttcgagatctcggccaagtccaactacaacttcgagaagcct
ttcctctggttggcacgaaagctcgtcggcaaccctaccctcgagttcgccgccgctccc
gctcttgcccctcccgaggttcaggtcgaccaggcccttatggctcagtacgacgccgag
ctccagcgcgccgctgctgctcccctgcccgacgaggacgacggtgacctctaa
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