Sporisorium graminicola: EX895_004140
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Entry
EX895_004140 CDS
T09331
Name
(RefSeq) hypothetical protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
sgra
Sporisorium graminicola
Pathway
sgra03008
Ribosome biogenesis in eukaryotes
sgra03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sgra00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EX895_004140
09122 Translation
03008 Ribosome biogenesis in eukaryotes
EX895_004140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sgra03041
]
EX895_004140
03009 Ribosome biogenesis [BR:
sgra03009
]
EX895_004140
Spliceosome [BR:
sgra03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
EX895_004140
Ribosome biogenesis [BR:
sgra03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
EX895_004140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
40727035
NCBI-ProteinID:
XP_029738837
UniProt:
A0A4U7KV32
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All DBs
Position
SGRAM_23:complement(join(37773..37793,37921..38280))
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AA seq
126 aa
AA seq
DB search
MSAPNPKAFPLADATLTNQILDLIQQASHYKQLKKGANEATKTLNRGICEFIVMAADVEP
IEIVLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVVSASVTTNEARELQSQIQTVKLA
IERLLI
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctcccaaccccaaggcgttccctctggccgatgccacgctcaccaaccagatc
ctcgatctcatccagcaggcttcgcactacaagcagctgaagaagggtgccaacgaggcc
accaagacgctcaaccgcggtatctgcgagttcatcgtcatggccgccgacgtcgagccc
atcgagattgtgctgcaccttcctttgctttgcgaggacaagaacgtgccctacgttttc
gtgccctccaagaccgctcttggaagggcctgcggtgtctcgcgccccgttgtctccgcc
tcggttaccaccaatgaggctcgtgagctccagagccagatccagaccgtcaagcttgct
atcgagcgtctccttatctaa
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