KEGG   Sporisorium graminicola: EX895_005829
Entry
EX895_005829      CDS       T09331                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
sgra  Sporisorium graminicola
Pathway
sgra03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgra00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EX895_005829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgra03019]
    EX895_005829
Messenger RNA biogenesis [BR:sgra03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     EX895_005829
SSDB
Motif
Pfam: Lysine_decarbox ABC_tran LDcluster4 AAA_21 AAA_25 AAA_29 AAA_28 RsgA_GTPase nSTAND3 FtsK_SpoIIIE MMR_HSR1 AAA_16 AAA_15 AAA_22 Arf AAA_23
Other DBs
NCBI-GeneID: 40728724
NCBI-ProteinID: XP_029736734
UniProt: A0A4V6ET19
LinkDB
Position
SGRAM_8:complement(145233..146900)
AA seq 555 aa
MSGYTDSICVFCGSSPGSKPEYMAAAASVGHAIAKHNYRLVYGGGSRGCMSGVSQAVFEA
GGHVLGVIPQVMATTVPSGHPGHKSGGATVVSKEGTGPTVHNPDAGSGLAETVVVQSMHE
RKQRMAAESNLGFIGLPGGYGTFEEVMEMVTWTQLGIHRKPMVLLNVNGFYTPMKQQIDL
AVEEGFISKAGQQLISVVDCDASNIAACGDAVLAEAVRLAKEVSSSGSGYWDWNKPQGPV
STAEGGVIDDAANKPLQLADGEQLAVEVSNLTFSFNPDIPPSLERCNLHLKRGSRCLLIG
ANGAGKSTLLRLLAGKKLCDSKVRVFGKDVFRDSPSGVTYLGTEWAMNPVVRSDIVVSTF
LDSVGGYRHKARRDRLLDILDVDLTWHMHAISDGERRRVQLCMGLMEPWDLLLLDEVTVD
LDVQVRADLLDFLQQETEERGATIIYATHIFDGLQSFPTHLAHMRLGTTTTTLPIDWPAT
NPADIAALPPTASADKDRDLSPLLNVSLAWLREDKVVRAEEESKRGRTRGANRKNETTDS
EKFFSKYDYSQTVTR
NT seq 1668 nt   +upstreamnt  +downstreamnt
atgagcggctacaccgactcgatatgcgtgttctgcggctcttcgcccggaagcaagccc
gaatacatggcggcggcggccagcgtcggccatgccatcgccaagcacaactatcgtcta
gtctacggcggtggctcccgcggatgcatgagcggcgtctctcaggccgtgttcgaagcg
ggtggacatgtcctcggtgtcatccctcaagtcatggccaccaccgttccctctggtcac
cctggtcacaagtccggtggagcgactgtcgtgtccaaggaaggcaccggtcctaccgtc
cacaacccggacgccggctcaggtctagccgagaccgtggtggtgcagtccatgcacgag
aggaagcagcgtatggctgcggagagtaacttgggcttcatcggccttccaggtgggtac
ggcacgtttgaagaggtcatggagatggtcacttggacgcagctgggcattcaccgcaag
cccatggtgctactcaacgtcaacggcttctacactcctatgaagcagcagatcgatctg
gctgttgaagagggctttatctccaaggctgggcagcagctcatcagtgtggtggactgc
gacgcttccaacattgctgcgtgcggtgacgctgtgctcgccgaggctgtgcgtctcgcc
aaagaggtttcttccagcggatccggctactgggactggaacaagccgcaaggacccgtc
agcactgccgaaggtggcgtcatcgacgacgctgccaacaaacctctccagctcgccgat
ggtgaacaactggcggtggaagtgtccaaccttacgtttagcttcaacccggacatcccc
ccttctctcgaacgctgcaatctgcacctcaagcgcggctcgcgctgtctattgattggt
gccaacggtgcaggcaaatcgacgctgttgcgcttgcttgctggaaagaagctgtgcgac
tcgaaggtgcgcgtattcggtaaggatgtgttccgcgactctccctcgggcgtcacgtat
ctcggcaccgagtgggcgatgaatcccgtggtgcgctccgacatcgtcgtttccaccttc
ctggactccgtgggaggctaccgtcacaaggcgcgtcgcgatcgtctgctcgatattttg
gatgttgacctcacgtggcacatgcatgctatctcggacggcgagcgacgacgtgtccag
ctttgcatggggttgatggagccctgggacctgctgttgctcgacgaagtgactgtggat
ctcgatgtgcaagtccgtgcggatctgctcgactttttgcagcaagagacggaggagagg
ggcgcgacgatcatctacgctacacacatctttgatgggcttcagagcttcccgacgcac
ttggcgcacatgcggctgggcaccacgacgacgacgctccccatcgattggcccgcgacc
aatccggccgacatcgctgctctgcctccgacggcaagtgcggataaggacagggacctg
tcacccctgctcaatgtctccttggcttggctgagggaggacaaggtagtcagggcggag
gaggagtccaaacgtggaaggaccagaggtgcgaacagaaaaaacgagacgaccgactcg
gagaagtttttcagcaagtacgattactcacagactgttactcgttaa

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