Streptomyces griseoincarnatus: UBV09_18265
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Entry
UBV09_18265 CDS
T11026
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
sgro Streptomyces griseoincarnatus
Pathway
sgro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
UBV09_18265 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgro03400
]
UBV09_18265 (nth)
Enzymes [BR:
sgro01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
UBV09_18265 (nth)
DNA repair and recombination proteins [BR:
sgro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
UBV09_18265 (nth)
Prokaryotic type
UBV09_18265 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HC2
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
WPW20513
LinkDB
All DBs
Position
4023567..4024727
Genome browser
AA seq
386 aa
AA seq
DB search
MGEQISDGGRETAKAAKTAAAGGSASAKKAAPARKTPARKTPAKKATAQKATAQKATAKK
ATAKKPAAKKAAPARGPAAKQASARKAAAAKSSAALKKAPAPRKQVVAPKKATASVPAAP
AKTVAAHPQGESRTALVRRARRVNRELAEVYPYAHPELDFENPFQLVVATVLSAQTTDLR
VNQTTPALFAKYPTPEDLAAADPEEVEEILRPTGFFRAKTKSVIGLSKALVEQFGGEVPG
RLEDLVKLPGVGRKTAFVVLGNAFGRPGITVDTHFQRLVRRWKWTDETDPDKIEAAVGAL
FPKSDWTDLSHHVIWHGRRICHARKPACGACPIAPLCPAYGEGETDPEKAEKLLKYEKAG
RPGQRLRPPQAYLDAGGRAAPPLGAG
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgaacagatctccgatggcggtagggagacggcgaaggccgcgaagacggctgcc
gccggaggatccgcctccgcgaagaaggccgcacctgcgcgcaagacgcctgcgcggaag
acgcctgcgaagaaggccacggcgcagaaagccacggcgcagaaagctacggcgaagaaa
gccaccgcgaagaagcccgccgccaagaaggccgctcccgcccgggggcccgccgcgaag
caggcgtccgccaggaaggccgccgccgccaagtcctccgccgctctcaagaaggccccc
gcgcccaggaagcaggtcgtcgcgcccaagaaggcgaccgcctccgtcccggccgccccg
gcgaagacggtcgccgcgcacccgcagggcgagtcccgtacggcgctggtgcggcgggcc
cgtcgtgtcaaccgcgagctcgccgaggtgtacccgtacgcccaccccgagctggacttc
gagaaccccttccaactcgtcgtcgccacggtgctgtcggcccagaccaccgacctgcgc
gtcaaccagacgacccccgcgctgttcgcgaagtaccccacccccgaggacctggcggcc
gccgacccggaggaggtggaggagatcctccgcccgaccggcttcttccgcgccaagacc
aagtcggtcatcgggctgtcgaaggcgctggtggagcagttcggcggggaggtgccgggc
cgcttggaggacctggtcaagctgcccggtgtgggccgcaagaccgcgttcgtcgtgctc
ggcaacgccttcggtcgccccgggatcaccgtggacacccacttccagcgcctcgtgcgc
cgctggaagtggaccgacgagaccgacccggacaagatcgaggcggcggtcggcgcgctg
ttcccgaagagcgactggaccgacctgtcccaccacgtcatctggcacggccgccgtatc
tgtcacgcccgcaagcccgcctgcggcgcctgcccgatcgccccgctctgcccggcgtac
ggcgagggagagacggacccggagaaggcggagaagctgctgaagtacgagaaggccggc
cggccgggccagcggctgaggcctccgcaggcatatctggacgccgggggcagagcggcc
ccgccgctgggggccggatga
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