KEGG   Streptomyces gilvosporeus: B1H19_28105
Entry
B1H19_28105       CDS       T05165                                 
Name
(GenBank) DNA ligase (NAD(+)) LigA
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
sgv  Streptomyces gilvosporeus
Pathway
sgv03030  DNA replication
sgv03410  Base excision repair
sgv03420  Nucleotide excision repair
sgv03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sgv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    B1H19_28105
   03410 Base excision repair
    B1H19_28105
   03420 Nucleotide excision repair
    B1H19_28105
   03430 Mismatch repair
    B1H19_28105
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sgv03032]
    B1H19_28105
   03400 DNA repair and recombination proteins [BR:sgv03400]
    B1H19_28105
Enzymes [BR:sgv01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     B1H19_28105
DNA replication proteins [BR:sgv03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     B1H19_28105
DNA repair and recombination proteins [BR:sgv03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     B1H19_28105
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     B1H19_28105
   MMR (mismatch excision repair)
    DNA ligase
     B1H19_28105
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      B1H19_28105
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT HHH_5 Nlig-Ia HHH
Other DBs
NCBI-ProteinID: ARF57540
UniProt: A0A1V0TXL0
LinkDB
Position
6268886..6271102
AA seq 738 aa
MAGEQHAAVSDVPAAAREQHAQLAEQIEEHRFRYYVKDAPVVSDAEFDKLLRSLEALEDE
HPTLRTPDSPTQKVAGSYATEFTEVAHRERMLSLDNAFDNDELAAWAERIAGELGGDAKS
AGYHFLCELKVDGLAVNLTYEHGRLTRAATRGDGRTGEDITPNVRTIAEIPHRLKGDRIP
ELVEVRGEVYFPMEKFLELNERLVADGKPPFANPRNAAAGSLRQKDPKVTATRPLHMVVH
GVGAREGFAIDRQSQAYDLLHEWGLPTAAHARVVDSLEAVRAFIAHYGDPVIRRTAVEHE
IDGVVVKLDEIPLQGRLGSTARAPRWAIAWKYPPEEVNTKLVDIKVGVGRTGRVTPYAQV
EPVTVAGSEVEFATLHNQEVVKAKGVLIGDTVVLRKAGDVIPEILGPVVDLRDGSEREFV
MPAECPECGTPLRAMKEGDIDLRCPNARTCPAQLRERVSYLAGRECLDIENFGEVAAAAL
TGPLEPATPPLADEGDLFDLTIEDLLPIKAYVLDKDSGLPKRDPKTGHEKVVTVFANQKG
EPKKNALAMLENIAKAKDRPLARIINGLSIRHVGPVAAQALAREFRSLERIEQATEEELA
ATEGVGPTIAAALKEWFAEEWHQQIIEKWRASGVRMEEEQTGEEGPRPLEGVTVVVTGTL
QSHTRDGAKESLQTLGAKVTGSVSKKTGFVVVGDNPGSKYDKAMQLKVPVLDEDGFAVLL
ERGPEAARAVAVTPPEGE
NT seq 2217 nt   +upstreamnt  +downstreamnt
gtggctggcgaacagcacgcagcggtatccgatgtgcccgcagcggcgcgggagcagcat
gcgcagctcgctgagcagatcgaggagcaccgcttccggtattacgtgaaggacgccccg
gtcgtcagcgacgcggagttcgacaagctgctgcgctccctggaagccctggaggacgag
catccgacgctgcgcaccccggattcgccgacgcagaaggtggccggctcctacgccacg
gagttcaccgaggtcgcgcaccgcgagcggatgctctccctggacaacgccttcgacaac
gacgagttggcggcctgggccgagcggatcgccggcgagctgggcggcgacgccaagagc
gccggctaccacttcctgtgcgagctgaaggtcgacggcctcgccgtcaacctcacctac
gagcacggccgcctcacccgcgccgccacccgcggcgacggccgcaccggcgaggacatc
acccccaacgtccgcaccatcgccgagatcccgcaccgcctcaagggcgaccggatcccc
gagctggtcgaggtgcgcggcgaggtctacttcccgatggagaagttcctcgagctcaac
gaacgcctggtggccgacggcaaaccgccgttcgccaacccccgtaacgccgcggccggt
tcgctgcgccagaaggaccccaaggtcaccgcgacccgcccgctgcacatggtcgtgcac
ggcgtcggcgcccgcgagggcttcgccatcgaccgtcagtcgcaggcgtacgacctgctg
cacgaatggggcctgccgacggcggcgcacgcccgggtggtcgactccctggaggcggtg
cgcgcgttcatcgcccactacggcgaccccgtcatccgccgtacggccgtcgagcacgag
atcgacggcgtggtcgtcaagctggacgagatcccgctccagggccgcctcggctccacg
gcgcgcgcgccgcgctgggcgatcgcctggaagtatccgccggaggaggtcaacaccaag
ctggtcgacatcaaggtgggggtcggccgcaccggccgggtgacgccgtacgcacaggtg
gaaccggtcaccgtcgcgggctccgaggtcgagttcgccacgctgcacaaccaggaggtc
gtcaaggccaagggcgtgctcatcggggacacggtggtgctgcgcaaggccggtgacgtg
atcccggagatcctcggcccggtcgtcgacctgcgggacggcagcgagcgcgagttcgtg
atgcccgccgaatgccccgagtgcggtacgccgctgcgggccatgaaggagggcgacatc
gacctgcgctgccccaacgcgcgtacctgccctgcccagttgagggagcgggtctcctat
ctggccggccgggagtgcctggacatcgagaacttcggcgaggtcgccgccgcggcgctc
acgggaccgctggagcccgccacccctccgctggccgacgagggcgacctcttcgacctg
accatcgaggacctgctgcccatcaaggcgtacgtcctcgacaaggacagcggactgccc
aagcgcgaccccaaaacgggccacgagaaggtcgtcacggtcttcgccaatcagaagggc
gagccgaagaagaacgccctcgcgatgctggagaacatcgcgaaggccaaggacaggccc
ctggcccggatcatcaacggcctgtcgatccggcatgtcggcccggtcgccgcccaggcc
ctcgcccgtgaattccgttccctggagcggatcgagcaggccaccgaggaggagctggcc
gccaccgagggcgtcgggccgaccatcgcggccgcgctcaaggaatggttcgccgaggaa
tggcaccagcagatcatcgagaagtggcgggcgtccggcgtccggatggaggaggagcag
acgggcgaggagggcccgcgtccgctggaaggcgtcaccgtcgtggtgacgggcacactt
cagtcacacaccagagatggcgcgaaagaatccctccagactctcggagcgaaggtgacc
ggttccgtttcgaagaagaccggtttcgtagtggtgggggataacccgggttcgaagtac
gacaaggccatgcagctgaaggtgcctgtcctggacgaggacggcttcgcggtgctgctg
gaaaggggtcccgaggcggcacgggcggtagcggtcactccgcctgagggggagtga

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