Streptomyces gardneri: H4W23_38850
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Entry
H4W23_38850 CDS
T07252
Name
(GenBank) response regulator transcription factor
KO
K18352
two-component system, OmpR family, response regulator VanR
Organism
sgx
Streptomyces gardneri
Pathway
sgx01502
Vancomycin resistance
sgx02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sgx00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
H4W23_38850
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
H4W23_38850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sgx02022
]
H4W23_38850
01504 Antimicrobial resistance genes [BR:
sgx01504
]
H4W23_38850
Two-component system [BR:
sgx02022
]
OmpR family
VanS-VanR (actinomycete type vancomycin resistance)
H4W23_38850
Antimicrobial resistance genes [BR:
sgx01504
]
Gene sets
Vancomycin resistance modules
Vancomycin resistance, D-Ala-D-Lac type [MD:
M00651
]
H4W23_38850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
Trans_reg_C
NIBRIN_BRCT_II
Motif
Other DBs
NCBI-ProteinID:
QPK49980
LinkDB
All DBs
Position
complement(8671590..8672297)
Genome browser
AA seq
235 aa
AA seq
DB search
MRVLIVEDEPYLAEAVRDGLRLEAIAADIAGDGDSALELLSVHSYDLAVLDRDIPGPSGD
EVARRIVASGSGIPILMLTAADRIDDKASGFELGADDYLTKPFELRELVLRLRALDRRRP
YARPPVREIAGLRLDPFRREVFRDGRFVALTRKQFAVLDVLVAAEGGVVSAEELLERAWD
ENTDPFTNAVRITVSALRKRLGEPWIIATVPGVGYRIDTEPDASPDTGRPGITHA
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtactgatcgtggaggacgagccgtacctggccgaagccgtccgtgacggtctc
cggctggaggcgatcgccgccgacatcgccggcgacggcgactccgccctggaactgctc
tccgtccactcctacgacctcgcggtcctcgaccgcgacatccccggcccctccggcgac
gaggtcgcccggcgcatcgtcgcctccggcagcggcatcccgatcctcatgctcacggcc
gccgaccgcatcgacgacaaggcctccggcttcgagctcggcgccgacgactacctcacc
aaaccgttcgagctgcgggagctcgtcctgcggctgagggcgctcgaccgcagacgcccg
tacgcacggcccccggtccgcgagatcgcgggcctgcgtctcgaccccttccgccgggag
gtcttccgcgacggtcgcttcgtcgcactcacgcgcaaacagttcgcggtgctcgacgtc
ctggtcgccgccgagggcggagtcgtcagtgccgaggagctgctggagcgggcctgggac
gagaacaccgaccccttcaccaacgccgtccgcatcaccgtctccgcgctgcgcaaacgg
ctcggcgagccgtggatcatcgcgaccgtgccgggtgtcggctaccgcatcgacaccgag
cccgacgcctcccccgataccggccgccccggcatcacccatgcgtag
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