Strigops habroptila (Kakapo): 115601656
Help
Entry
115601656 CDS
T08851
Symbol
ATN1
Name
(RefSeq) atrophin-1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115601656 (ATN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
115601656
NCBI-ProteinID:
XP_030327816
LinkDB
All DBs
Position
2:10227249..10255376
Genome browser
AA seq
1209 aa
AA seq
DB search
MFSSNRAKENGGPTPKRMKTRQNKDSMSMRSGRKKETPGPREELRSRGRASPGGVSTSSS
DGKAEKSRQATKKGRVEESCAPKGSKQGRTEEISESEGEDTNAPKKTKTEELPCPPSPSD
VDSLDGHSFNDEMSSDPRDIDQDNRSTSPSVYSPGSVENDSDSSSVLSQGPSHSYHHPPL
FPQSPPVAPAPDSLARPPEPSFGLPGEVHPQGPPAGSYHSQLEGQPSRLFQAQAPQTPTS
SSSAATAPPAPPSSSSSSSSSSSSSSSSSHAPLYPTANVVQVGTKIPGGVGGLPAPGGRE
QSLSTKHNPPPTTPISLASVVGGLPPQKTPPANPPAAPPASAPSFPHVSANLPPPPALRP
LNNAAAASSSPGMVGQALSTHLPSPHGMGQDKAPALAPSRYPYAPPPLPPSSSSAQYPQP
SPAQPLPSYSASYGHSFPPPSGLSVSSQPPKYTQPSLPSQPVWSQGPPPYSRPLGNTGSH
PAAPFPGQPPHHQQPPQQHHHGHGSSGGVSPAAAAPPQASGGYPHGLESNSHHPSHATYG
LRLYPPHSQAAYSQAPSAAAAAAPSSSSSSSSSSSSSSSAASSQGSYPGMCTHPPGQSPA
TYTFPPPPPPSPAHGAGPPVTSTATTLSTVIATMASPSAAPYKTVSPPVPPSAVVPYGKR
AASPVPTFQPPAPYKPGSPPASSAAPFRAATPPGYRVASSPVAGGYKAPSPAPSAPAALP
GSMAAPAPPAPPLPLSAAQIKQEPSEEYEPPESPVPPARSPSPPPKVVDVPSHASQSARF
NKHLDRGFNSCSRTDLYFVPLDGSKLAKKRADLVEKVRREAEQKAREEKEREREREKERE
REKERELERSVKMAQEGRPVECSSLGPVPHRPSFEQGSAVATVPPYLGPDTPALRTLSEY
ARPHVMSPSNRNHPFYVPLGAVDPGLLGYNVPAIYSSDPATRERELREREARERDLRDRD
LRERLKPGFEVKPAELEQLHAVPAAAMDPFPRHGGLSLQTAPGLHPAFPFHPGLGHLERE
RLALAAGPTLRPDMSYAERLAAERQHAERVAALSNDPLARLQMLNVTPHHHQHSHIHSHL
HLHQQDAIHAASASVHPLIDPLASGSHLTRIPYPAGTIPNPLLPHPLHENEVLRHQLFAA
PYRDLPGSLSAPMSAAHQLQAMHAQSAELQRLALEQQQWLHAHHPLHGVPLPTQEDYYSH
LKKESDKPL
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatcaaaccgggccaaggagaatgggggtcccacacccaaaagaatgaagacg
cgacagaacaaggactcgatgtcaatgcggagtggacggaagaaagagactccagggccc
cgagaggagctcaggtcacggggccgagcttcccccgggggtgtcagcacctccagcagt
gatggcaaggctgagaagtcccggcaagcgacaaagaaaggccgggtggaggaatcctgt
gcccccaagggcagcaagcagggccgaacagaagagatctcggagagtgaaggggaggac
accaatgctcccaaaaaaaccaagaccgaggagttgccctgtcctccatccccgtctgac
gttgacagccttgatggccacagcttcaacgatgagatgagcagtgacccgcgggacatt
gaccaggataacaggagcacctcacccagcgtctacagccctggcagtgtggagaatgac
tccgactcctcctccgtgctgtcccaggggccgtctcactcctaccaccaccctccgctc
ttcccgcagagcccgccggtagctcccgctcccgacagcctggcccgtccacccgagccc
agcttcgggctcccaggcgaggtgcacccccagggacccccggcggggagctaccactcc
cagctggagggccagccctcacgcctcttccaggctcaagccccacagacacccacctcc
tcctcctctgctgccactgcccctcctgctcctccttcctcctcctcatcctcctcttct
tcctcttcctcctcgtcctcctcctcccatgctcctctttaccctacagccaatgtggtc
caggttgggaccaagattcctggcggtgtggggggtctccccgcaccggggggccgcgag
cagagcctcagcaccaagcacaacccaccacccaccaccccaatctcactggcatcagtg
gtcggggggctcccccctcagaagacgcccccagccaaccctccagctgcccccccggct
tcggccccttccttccctcatgtctccgccaacctgcctccccccccagccctgcggcca
ctcaacaacgctgcggctgcctccagctccccgggcatggtggggcaggccctgagcacc
caccttccctcaccccacggcatggggcaggacaaggcaccggccctggccccctcccgc
tacccctatgccccaccgccgctgccgccctccagctcctcagcccagtacccccagccc
tccccggcccagcccctgcccagttacagtgcttcctatgggcactccttccccccaccc
agcggcctctctgtgtccagccagccccccaagtacacccagccctccctgccctcccag
cccgtctggagccaggggccacccccctacagccgccccctgggcaacacaggctcccac
ccggctgcccccttccctggccagcccccccatcaccagcagcccccccagcagcaccac
cacggccatgggagcagtgggggggtctccccagcagccgcagctcccccccaggcctcc
gggggttacccccacggcttggagtcaaacagccatcatccttcccatgctacctatggg
ctgcgcctctaccctccccacagccaggctgcctacagccaggcaccctcagccgccgcc
gctgcagccccttcttcctcatcctcatcctcctcctcttcctcttcatcctcttccgcc
gcctcttcccaaggaagctaccccggaatgtgcactcaccccccgggccagagtcctgcc
acttacaccttccccccgccgccgcccccctcccctgcccatggggctggccctccagtc
acctccactgccaccaccctctccactgtcatcgctaccatggcctccccctccgcggcc
ccctacaagacagtctcacccccggtacccccatcagccgtggtcccctatggcaagcgg
gcagcctcgcctgttcccacctttcagcccccagccccctacaagccagggtcacccccc
gcttcctcggccgcccctttccgggcagccacccctcctggctaccgggtggcctcctcc
cctgtggcggggggctacaaagccccctcgcctgccccctctgccccagcagccctgcca
gggagcatggctgccccggccccccctgcgcccccgctgcccctcagcgctgcacagatc
aagcaggagccgtcagaggagtacgagccccctgagagccccgtgccaccggctcgcagc
ccctcaccgcctcccaaggtggtggatgtgccaagccacgccagccagtcagccagattc
aacaagcacctggaccgcggcttcaactcctgctcccgcacggatctgtacttcgtgccc
ctcgatggctccaagttggccaagaaaagggcagacctggtggaaaaagtgcggcgagag
gctgagcagaaggcgcgggaagagaaggaacgggagcgggagcgggagaaggagcgggag
cgggagaaggagcgggagctagagaggagcgtgaagatggcccaggagggccggccagtt
gagtgctcatccctggggccggttccccaccgcccctcctttgagcagggcagtgctgta
gcgactgttcctccatacctgggtcctgacaccccggctctgcgcaccctcagtgaatat
gcccggccccacgtcatgtcccccagcaaccgcaaccaccctttctacgtgccactcggt
gcggtcgacccaggcctgctggggtacaacgtcccggccatctacagcagtgatccagcg
acgcgggagcgggagctgagggagcgggaagcccgtgaacgagacctgagggaccgggac
ctgcgtgaacgtctcaagcccggctttgaagtcaagccagccgagctggagcagctccat
gccgtgccagctgctgccatggatccgttcccacgccacggcgggctgagtctgcagaca
gctcccggccttcatcccgcttttcccttccacccagggctgggccacttggagcgggag
aggctggcgctggcagccggcccgacccttcgtcccgacatgtcctatgccgagcgcttg
gcagctgagcgccagcatgccgagcgggtggctgctctcagcaatgaccctctggcccgg
ctgcagatgctcaatgtgacacctcatcatcatcagcattcccacatccactcccacctc
catctccaccagcaggatgccatacatgcagcttcggcctctgttcaccctcttattgac
ccactcgcctcgggatcacacctgacccggataccatacccggctggaaccatcccaaac
cctctcctgcctcaccctctacatgagaatgaagtgctgcgccaccagctttttgctgca
ccctacagggacctgccgggctccctctcggcgcccatgtccgcagcacatcagctccag
gccatgcacgcacagtcagctgagctgcagcgcctggctctggaacagcagcagtggctc
catgcgcatcaccctctgcacggcgtgccgctcccgacgcaggaggattactacagccac
ctgaagaaagaaagtgacaaacccctttaa
DBGET
integrated database retrieval system
