Strigops habroptila (Kakapo): 115602433
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Entry
115602433 CDS
T08851
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
shab04812
]
115602433 (PKP1)
Cytoskeleton proteins [BR:
shab04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
115602433 (PKP1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT
HEAT_EZ
Adaptin_N
HEAT_2
V-ATPase_H_C
ARMC9_ARM
Mo25
Atx10homo_assoc
Arm_2
Motif
Other DBs
NCBI-GeneID:
115602433
NCBI-ProteinID:
XP_030329440
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All DBs
Position
18:complement(6137823..6178052)
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AA seq
734 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYTKTQTGNSNWGYPLYNGTLKRDVENRRYSSYS
QMEGWGSKHYSKAVCSPARAGSDYCFVQNIKSSRSEPDLYCEPPRGTLRKSQVGGRVEHK
ATLNRQSIYSSCSTQQGTTRTSKKMPARALSCPSSNKPDVVYAQPMMSCKQDVVYGQAQS
GSRICGDEIDGGTMTIQKAIQLLCSSDDKYQAMGAYFLQHTCFQDESAKQEVYRLGGIAK
LVELLRSTNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLT
GLLWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGTCSRTREIIDPEVFFNATGCLR
NLSSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPN
KYTQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTY
LSLMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNSSEVV
RSGASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTNSYGEIMTSACYTLRNLIMSN
PHLGKSYLTSNMINNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMG
SLAGTTFRTLSSRF
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgctccactctccactgaaaacagcgttggcgtatgagtgcttccaagaccaggccagc
tccacgctggctctgccttcggaccacaagctgaaaactaagggcacgggaaaacagcgg
gtccaagagcaagtgatgatgacggtgaagcggcagaagcaaaagtcatctgtgtcatcg
agcgtgggacactccaatcgaggttccatgtacgatggtttagctgatggttatggctat
ggaacatcccggggcagctattacaccaaaacccaaacaggaaacagcaactggggatat
ccgctgtacaacgggacactgaagcgggacgtggagaacaggcgctacagctcgtacagc
cagatggagggctggggcagcaagcactacagcaaggccgtctgcagccccgccagggcc
ggcagcgactactgctttgtgcagaacatcaagagcagccgcagcgagcccgacctctac
tgtgaaccaccccggggcacgctgaggaagagccaggtcgggggccgggtagagcacaag
gctaccttgaaccgccagagcatctacagcagctgcagcacccagcaaggaactaccagg
acaagtaaaaaaatgccagcacgggccctctcctgcccctcaagcaacaagcccgacgtg
gtctatgcccagcccatgatgagctgcaagcaggacgtggtttatggacaggctcagtct
ggctccagaatatgtggtgatgagatagatggtggtacaatgaccatccagaaagccata
caactcctgtgctcctctgatgacaaataccaggctatgggtgcttacttcctccagcac
acctgcttccaggatgagtctgccaagcaagaggtctatcggctggggggaatcgccaag
cttgtggagctgctccgcagcacaaaccagaacgtacagcgggcagcagccggagccctc
cggaacttggtcttcaagaatccaaccaacaagatagaaacccggcggcagaatgggata
agggagtgcgtgagcctcctgcggagaacagggaacactgagattcagaaacaactgaca
ggactgctctggaacctctcctccactgatgagttaaaagaagagttgatacaggaagcc
ctccccgtcttgacagactgtgttatcatccctttctctggctggtctgatggcacctgc
agtaggacaagagaaattattgacccagaagtattcttcaatgctacagggtgtttgaga
aacttgagttctgcagacatggggcgccagacaatgaggaattaccctggcttgatcgat
tcagtcatgacttatgcccagaactgcgtggcttctaaccgacccgatgacaagtccgtg
gagaattgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaac
aaatacacccagctcaaccacatggcccggagcgtttatatggacaaaactctcacaggc
tgtttcaacagcaggagtggtaaaatggagaatgatgagtacggtgtcccccttcctgag
gaggattttaaacccaaaggacccagctggctctaccactctgatgccatccgcacctac
ctgtccctgatggatcagagcaagaaggatgccaccctggaagcttgtgctggagctctg
cagaacctcactgcgagccgagggctgatgtccaatgcaatgagccagttgattggtttg
aaggagaagggtttgcctcgcattgcacggctcctccagtccaacagctctgaagttgtc
cggtctggggcttctttgctgagcaacatgtcccggcatcctgttctccacaaaaccatg
gctcaccaggtgctcccagatgtatcacgtctcctgtcattccagtctggaaataccaac
agctatggcgagatcatgacatcagcatgttacactctgaggaacctcatcatgtccaac
ccacacctgggaaagtcttacttgacaagcaacatgataaataatgtagtaagcctgtgc
cgaaatggctcctgtccaaaagcggccgaagctgctcgcctcctcctgacagatctttgg
tcaaacagggagctccagagtgtgctcaagcagcaaggatttgataagaacatgatggga
tctttagctggaacgaccttcaggaccctctcatccagattttag
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