Strigops habroptila (Kakapo): 115602448
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Entry
115602448 CDS
T08851
Symbol
AP4B1
Name
(RefSeq) AP-4 complex subunit beta-1
KO
K12401
AP-4 complex subunit beta-1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115602448 (AP4B1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shab04131
]
115602448 (AP4B1)
Membrane trafficking [BR:
shab04131
]
Endosome - Golgi transport
Others
AP-4 complex
115602448 (AP4B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Cnd1
B2-adapt-app_C
HEAT_2
HEAT
PDS5
Motif
Other DBs
NCBI-GeneID:
115602448
NCBI-ProteinID:
XP_030329472
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Position
18:complement(4160795..4168418)
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AA seq
739 aa
AA seq
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MPYLGGEEVVRELRRALSNPHVQADRMRYRNAVLRVIRHMAQGVDVSGLFPEMVKASAVS
DVVQKKLVSLYVRAQAPRQPQLALLAVNTLRKDCAHPSPAVRGLALRSMCGLRMPGIQEY
LQQPLLSGLRDKASYVRRVAVLGCAKMLKLQGDCEVDGALVNELYSLLRDPDPIVVVNCL
RALEEILKKEGGVVINKPIAHHLLNRMADLDQWGQSEVLTFLLRYKPRSEEELFDILNLL
DGCLKSSSPSVVMAATKLFLVLAREYPHVQADVLVRVKGPLLSACTSESRELCFTALCHV
RQILRSLPGHFSSHYKKFFCSYSEPHYIKCQKMDVLCELVNDENVQQVLEELKSYCTDVS
VELAQGAIFAIGNIARTYTEQCVGILTELLGLQQEHITSAVIQAFRDLVWLCPQCTDAVC
QALPSCEDTIQDSEGKQALIWLLGTHGEKVPNAPYVLEDFVENVKSEMFPAVKMELLTAL
VRLFLSRPAECQDMLGRLLYFCIEEEMDMAVRDRGLFYYRLLQSGVEEVKRVLCSPKSDP
SLGLLEDKTEQPVNTWASEFNTLAPVYGRERWALVTAHQPAEPSYTCSHIDSSNRDTESL
ISEENKEVLEVHPDTGSLTLIPDVYLTAEQFEKTWLSLDTNWHLSLPWCGTVHPDTIQTA
LHVVHIQTIAMSKAGVQPWKAYLSAQDNTGCLFLTELLLEAADSEMQVSVKQSEAKPEAM
QTFISALKTVMGTVAGLES
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacctggggggcgaggaggtggtgcgggagctccgtcgggcactgtccaacccg
cacgtacaagcggatcggatgcggtaccgcaatgccgtcctgcgtgttatccggcacatg
gcgcagggtgtggacgtgtcggggctgttcccagagatggtgaaggccagcgcggtgtcc
gacgtggtgcagaagaagctggtgtcgctgtacgtgcgggcgcaggcgccgcggcagccg
cagctggcgctgctggcggtcaacacgctgcgcaaggactgcgcccaccccagccccgct
gtgaggggactcgccctccgcagcatgtgcggcctcaggatgcctggcatccaggagtac
ctccagcagcccctcctcagcggcctgcgggataaagcctcctacgtgcgcagagtggcc
gtactcggctgtgcgaagatgctgaagctgcagggggactgcgaagtggatggtgctttg
gtgaatgagctgtacagtttgcttcgcgacccggatcctattgtagttgtgaattgtctg
agggcattagaagagatcttgaagaaggaggggggagttgtcatcaacaaacccattgcc
catcatctcctcaacaggatggcagatctggatcagtgggggcagagcgaggtgcttacc
ttccttctgcgctacaaaccccgcagtgaggaggaactctttgacatactcaatttactg
gatggctgtctcaaaagcagcagccccagcgttgtgatggcagccaccaagcttttccta
gtgctggccagggagtacccgcatgtgcaggcagatgttctggtgagagtgaagggacca
ctgctgtctgcctgcacctctgagagcagagagctctgcttcactgcactgtgccacgtg
cgtcagatccttcgtagccttcctggccatttcagcagccactacaaaaagttcttctgt
tcgtattcggagccccactacatcaaatgccagaagatggatgtgttgtgtgagctggtg
aatgatgaaaacgtacagcaagtgctggaggagctgaagagttattgcactgatgtatcg
gtagagcttgcccaaggggcgatctttgccataggcaatattgctaggacatacacagaa
cagtgtgtggggattctgacagagctcctggggcttcagcaggaacatatcacttcagca
gtcatacaggctttccgggatctggtttggctgtgtccccagtgcacagatgcagtgtgt
caggcactgcctagctgcgaggacaccatccaggacagtgagggcaagcaagccttgatc
tggctcctgggcacacatggtgagaaagtaccaaatgccccatatgttttagaggacttt
gtggagaacgtgaaatcagagatgtttccagcagtgaagatggagcttctgacagcactg
gttcgccttttcctgtcccgtcctgctgagtgtcaggacatgctagggagactgctctac
ttctgcatagaggaggagatggatatggcagtacgagaccgtggattgttctactatcgc
cttttgcagtctggtgtggaagaagtgaaacgggtcctgtgtagccccaagtctgatccc
tctctggggcttctggaagacaaaactgagcaacctgtgaatacgtgggcttcagagttt
aatactcttgcaccagtttatggtagagaacgctgggcacttgtcactgctcaccagcca
gcagaaccctcttacacttgttctcatattgactccagcaacagagacacagagtcactg
atttctgaagagaataaagaagtcctcgaggtgcatcctgatacaggcagcctgacctta
attcctgatgtttacctgactgcagaacagtttgagaagacctggctgagcttggacaca
aactggcacctttctctgccctggtgtgggacagttcatccagataccatacagacagct
cttcacgttgtccacatacagactattgctatgagcaaagctggtgtccagccatggaaa
gcttatctcagtgctcaggataacacaggttgcctcttcctcacagagctcttgctcgag
gcagcagattcggagatgcaggtttcagtcaagcagagtgaggcaaagccagaggcaatg
cagacctttatttcagcattaaagacagtcatggggacggttgctgggctggagtcctga
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