Strigops habroptila (Kakapo): 115602619
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Entry
115602619 CDS
T08851
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab00310
Lysine degradation
shab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115602619 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shab03036
]
115602619 (SETDB1)
Enzymes [BR:
shab01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
115602619 (SETDB1)
Chromosome and associated proteins [BR:
shab03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115602619 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
115602619 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
Tudor_5
SET
MBD
Pre-SET
Chromo_MORC2_6th
DUF4537
ODAD1_CC
zf-C4H2
Phytochelatin
Motif
Other DBs
NCBI-GeneID:
115602619
NCBI-ProteinID:
XP_030329757
LinkDB
All DBs
Position
22:complement(2444128..2461968)
Genome browser
AA seq
1318 aa
AA seq
DB search
MDSQEMKELQQEVMEELGISMEELQELIDKELEQCECVRQRRQQLEQLEKCVRQKEEEVA
RVDRLFDDASRAIDKCESLVKDLYSKLGLQYRESSSEDEELAAKAMEVIEIPDEDDDDVM
SVDPGWKHDPGTGSSRVTKDQTLLQEAVAAIRKSAQDVQKFVDAVNKKTSAQDAPKDAQS
SQEGPGSGQPLGSAAAGGDLSCDEDLNVGMRILGKKRAKTWHKGTLIAIQSVGAGKKYKV
KFDNKGKSLLSGNHIAYDYHPRPEKHYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKDR
FLIFFDDGYASYVKEWELYPICRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQ
LIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQEKK
LSGQARTRPNVGAVRSKGPVVQYTQDLTGAGTQYKPLEQMQAASRAPRSASPQPAEMEKR
PACFLMDGALLLVHLADQTLIQTIRCSDSPLAQARKQVAKKSTSFRPSSVGSGQSSPSPP
VLGDTAGAGRSAAAPQHRLPSSQAGSSALQAFHGMMDRVPNEPSYRAPLEKLFYLPHVCS
YTCLSRVRPLRGDQYRSRNPLLIPLLYDFRRMTARRRLNRKMGFHVLYKTPCGLCLRTMQ
EIERYLFETDCDFLFLEMFCLDPYVLVDRKFQPYKPYYYIADITKGREDVPLSCVNEIDN
TPPPQVAYSKERIPGKGVYINTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQI
NPSSGYQHKRLEECLPTGVYECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRC
LDDIAKGSFVCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSD
SSGVDLKDDEEENTGTEEQEESNEDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGL
SETASKDSGLTRQLHPDEAAVAASCKLPVSEETSKNKVVSWLSSNSMSDGFQDNDSTSSF
KMSEGGEAKASKGEIPGEREKTCAAAPGDVDRELKASKKDEPEDAAKIPGLAELGRMYGY
NPSPPKLEGIRRPTSKTALLQSKRLSLAPQPATDVHSGAGGPFAQDVLTLSSSTDSEGEN
GPAAAGQAPGTANDSDDIQTISSGSEEEEGDEKKNPSSGSGPMKRQVAVKSTRGFALKST
HGIAIKSTTMAAEKGESAPVRRTTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQ
NVFVDTHDLRFPWVAFFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3957 nt
NT seq
+upstream
nt +downstream
nt
atggattcccaggagatgaaggagctgcagcaggaggtgatggaggagctgggaatctcc
atggaggagctgcaggagctcatcgacaaggagctggagcagtgcgagtgcgtgcggcag
cggaggcagcagctggagcagctcgagaagtgcgtgaggcagaaagaagaggaggtggct
cgcgtggacaggctcttcgatgatgcttccagagccattgacaagtgtgagagcctggtg
aaggacctgtattccaagctgggcctgcagtaccgggagagcagctccgaggatgaggag
ctggctgccaaagccatggaagtcattgagatcccggatgaggacgacgacgatgtcatg
agcgttgatccaggctggaagcacgacccaggcactggtagctccagagtcacaaaggat
cagactctgctgcaggaagccgtggctgccatcaggaagtctgcccaggatgtgcagaag
ttcgtggatgctgtgaacaagaaaacaagtgcccaggacgccccgaaagatgcacagagc
tctcaggaaggtcctggctctggccagcccctgggctctgcagcagcagggggggatctc
agctgtgatgaagatctcaacgttggcatgaggatcctgggcaagaagagagccaagaca
tggcacaagggcactctgatcgccatccagagcgtgggtgctggcaagaagtacaaagtg
aagtttgataacaaggggaagagtttgctctctggcaaccacattgcttatgactatcac
ccgcggcctgagaagcactacgtcggcagcagggtcgtggccaaatacaaagatgggaac
caggtctggctctacgccggcatcgtggctgagaccccaaacgtgaagaataaggacagg
ttcctcatcttcttcgatgatggttacgcttcgtatgtcaaggagtgggagctgtaccca
atctgcagacccttgaaaaagacctgggaagacattgaggatgtttcgtgccgggatttc
atcgaggagtacatcacagcctaccccaaccgccccatggtgctgctgaagagcgggcag
ctcatcaaaacagagtgggaagggacctggtggaaatcccgagtggaagaagtggatggc
agcctggtcaagatcctgttcctggatgacaagcgctgcgagtggatttaccggggctcc
acgcgcctcgagcccatgttcagcatgaaaacctccacagcctccacccaggagaagaag
ctgagtggacaagcaagaactcgtcccaatgtgggtgctgtgaggagcaaagggcccgtg
gtccagtacacccaggatctaacgggagctggtacccagtacaagcctttggagcagatg
caggcagcctcacgagccccacgctccgcttctccacagcctgctgagatggagaaaaga
cctgcttgttttctcatggatggggcgctgctgctcgtgcatcttgcagatcagaccctc
atacaaacaatcaggtgctcggacagcccgctggcccaggccaggaagcaagtggccaag
aagagcacctccttccgtcccagctccgtgggctccgggcagtcctccccttccccgcct
gtcctcggtgacaccgctggggcgggcaggagcgctgcggccccgcagcaccgcctgccc
agcagccaggcgggcagcagcgccctgcaggccttccatggcatgatggaccgtgtgccc
aacgagccctcgtaccgagcgcccctggagaagctcttctacctgccccacgtgtgcagc
tacacgtgcctgtcgcgcgtgcggccgctgcgcggtgaccagtaccgcagccggaacccg
ctgctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcctcaaccgc
aagatgggcttccacgtgctctacaaaacgccatgcgggctctgcctccggaccatgcag
gagatcgagcgctacctcttcgagacagactgcgacttcttgttcctggagatgttctgc
ttggatccctacgtgctggtggatcgcaagttccagccctacaaaccctactactacatc
gcggacatcaccaagggcagggaggacgtgcccttgtcctgtgtcaatgagatcgataac
accccacctcctcaggtggcctacagcaaggagaggatcccaggcaaaggggtttacatc
aacaccagctgggagttcctcgtgggctgtgactgcaaagacggctgcagagacaaatca
aaatgtgcctgtcaccagctgactgtccaagcgactggctgcaccccgggggggcagatc
aaccccagctctggataccagcacaaaaggctggaagaatgtctcccaacaggagtttac
gagtgcaacaagaggtgcaagtgcaacgttaacatgtgcaccaaccgcttggtccaacac
ggcctccaggtccggctgcagttattcaagacccagaacaaaggttggggcattcgctgc
ctcgatgacattgctaaaggctcctttgtctgcatctatgcagggaagatcctcacggat
gactttgctgacaaagaggggctggagatgggggacgagtactttgccaacctggatcac
atcgagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcggac
agcagcggggtggacctgaaggacgacgaggaggagaacacgggcacggaggagcaggag
gagtccaacgaggacagctccgacgacaacttctgcaaggacgaggacttcagcacgagc
tcggtgtggcgcagctacgccacgcgccgccagacgcgcggccagaaggagaacggcctc
tcggagacggcctccaaggactcggggctcacccggcagctgcaccccgacgaggcggcc
gtggctgcctcctgcaagctcccggtgtccgaggagacctccaagaacaaggtggtgtcg
tggctgagctccaacagcatgtccgatggcttccaggacaatgacagcacctcctccttc
aagatgagtgaagggggggaagccaaggccagcaaaggggagatcccaggggagagggag
aaaacctgtgctgctgccccgggagacgtggatcgggagctgaaggcatcaaagaaagac
gaacctgaggacgcagccaaaattcccgggctggccgagttgggaaggatgtatggatac
aaccccagccctcccaagctggaggggatccggaggccgacgagcaagaccgcgctgctg
cagagcaaacggctttctctcgccccacagcccgccacggacgtgcactcgggagctggg
ggtccctttgcacaggacgtgctgaccctgtcgagcagcactgacagcgagggtgagaac
ggccccgcggcggcgggacaggccccgggcaccgccaacgacagcgacgacatccagacc
atttcctcgggctccgaggaggaggagggcgatgagaagaagaacccttcctcggggtca
ggtcccatgaagaggcaggtggctgtgaaatccacccggggctttgccctcaagtccacc
catggcatcgccatcaaatccaccaccatggccgccgagaagggcgagagcgcgccggtg
cgcaggaccacgcggcagttctacgacggggaggagtcctgctacatcatcgatgccaag
ctcgaggggaacctgggccgctacctcaaccatagctgcagccccaacctcttcgtgcag
aacgtctttgtggacacccacgacctccgcttcccctgggtcgccttcttcgccagcaag
aggattcgtgcaggcacggagctgacctgggattacaactacgaagtgggcagcgtggaa
ggcaaagagctgctgtgctgctgcggggccatcgagtgccgcgggcggctgctctga
DBGET
integrated database retrieval system
