Strigops habroptila (Kakapo): 115603644
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Entry
115603644 CDS
T08851
Symbol
TRPC6
Name
(RefSeq) short transient receptor potential channel 6 isoform X1
KO
K04969
transient receptor potential cation channel subfamily C member 6
Organism
shab
Strigops habroptila (Kakapo)
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115603644 (TRPC6)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115603644 (TRPC6)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
Cas8b_C
Cmr1_C
Motif
Other DBs
NCBI-GeneID:
115603644
NCBI-ProteinID:
XP_030331553
UniProt:
A0A672TQL1
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Position
2:109534120..109627508
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AA seq
894 aa
AA seq
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MSQAQPYAPRKSSSPAAGARRNDSQDYLLLDAEPCEESALPPYAFYPVRGNENRLALRRQ
TILREKGRRQASRGPAYMFNDHSTSLSLEEERFLDAAEYGNIPVIRKMLEECPSLNVNCV
DYMGQNALQLAVANEHLEITELLLKKENLSRVGDALLLAISKGYVRIVEAILNHPAFAEG
KRLTLSPSQSELQHDDFYAYDEDGTRFSHDVTPIILAAHCHEYEIVHTLLRKGARIDRPH
DYFCKCSECNQKQKHDSFSHSRSRINAYKGLASPAYLSLSSEDPVMTALELSNELAVLAN
IEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVEMSHNNEHGRPSLSRLKLA
IKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAVGLPFLSMAYWIAPC
SKLGRIMRGPFMKFVAHAASFTIFLGLLVMNAADRFDGTKLRPNETTGNVKQLFRMKTSC
FSWMEMLIISWVIGMIWSECKEIWSQGPKEYLFELWNMLDFGMLAIFAASFIARFMAFWH
ASRAQNFVDANMKDLTSPTLEPNIKYYTLARINWDPSDPQIISEGLYAIAVVLSFSRIAY
ILPANESFGPLQISLGRTVKDIFKFMVIFIMVFVAFMIGMFNLYSYYLGAKQNEAFTTVE
ESFKTLFWAIFGLSEVKSVVINYKHKFIENTGYVLYGVYNVTMVIVLLNMLIAMINSSFQ
EIEDDADVEWKFARAKLWFSYFEEGRTLPVPFNLVPSPKSLLYVLLRIKKCISKPFLCQK
KSFQEDAEMNKLGQRKQSSIRSSDEIHLNSLNNPPRQYQKIMKRLIKRYVLKAQIDKESD
EVNEGELKEIKQDISSLRYELLEEKSQNSEDLAELIRKLGEKLSIDSKEEESER
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcagccctacgccccgcggaagagcagctccccggcggccggcgcccgg
cggaacgacagccaagactacctgctgctcgacgcggagccctgcgaggagagcgccctg
ccgccttacgccttctaccccgtccgaggcaacgagaacagactagcactacgacgacag
accattctccgggagaaggggaggaggcaggccagtcgtgggccagcctatatgtttaat
gaccactcaacaagtctttctctggaggaagagcgctttttggatgcagcagaatatgga
aatattccagtgattcgcaaaatgctggaagaatgtccctcactcaacgtgaattgtgtg
gactacatggggcagaatgccttgcagctagcagttgccaatgagcacctggagatcaca
gaacttctgctgaagaaggagaacctgtctcgggttggggatgccttgcttttggctatt
agcaaaggttacgttcggatagtggaagccatcctaaaccatcccgcatttgctgaaggc
aagaggcttacattgagtcctagccagtcagaactccagcatgatgacttttatgcatat
gatgaagatgggacacgtttttcccatgatgttacaccgatcattctggccgctcattgc
catgagtatgagattgtccacactctgctgagaaaaggagctcggatcgataggccacat
gactatttctgcaagtgcagtgaatgcaatcagaaacaaaaacatgactctttcagccat
tcaagatccagaatcaatgcctacaaaggtctggccagccctgcttatctgtctttgtcc
agtgaagatcctgtaatgactgccttagagctcagcaatgagctggccgttcttgccaac
attgagaaagagttcaagaatgattacaagaaattgtctatgcaatgcaaggattttgta
gttggactccttgatttgtgcagaaatacagaagaagtagaagctattttaaatggtgat
gtagagatgagccataataatgaacatggtcgccccagccttagccgcttaaaacttgcc
attaagtatgaagttaaaaagtttgtagcacatccaaactgccagcaacaacttctttca
atctggtatgagaatttgtcaggtttacggcagcagaccatggcagtgaagtttctggtt
gttcttgctgttgcagtaggactgcccttcctttcaatggcttactggattgctccttgc
agtaagctggggaggataatgcgtggaccatttatgaagtttgtagcccatgcagcctct
ttcaccatttttcttggtctacttgtcatgaatgcagctgacagatttgatggcaccaaa
cttcgacctaatgaaacgacaggcaatgtaaaacagctatttaggatgaaaacatcgtgt
ttctcatggatggagatgctcattatttcttgggtaataggcatgatatggtctgaatgt
aaagaaatttggtctcagggtccaaaggaatacctttttgagttatggaatatgcttgat
tttggtatgttagcaatttttgcagcatcgttcatagcaaggtttatggcattttggcat
gcatccagagcccagaacttcgtcgatgcaaatatgaaagatctgacaagtccaacattg
gagcccaacataaaatactacaccttggccagaataaactgggatccgtctgatcctcag
atcatatctgaaggcctgtatgcaattgcggtagtattaagtttctccagaatagcctac
atcttaccagctaatgaaagctttggaccactgcagatatcacttggcagaactgtgaaa
gacatcttcaagttcatggtgatatttatcatggtgtttgtggctttcatgataggcatg
tttaatctctattcctactatctgggggcaaaacaaaatgaagcattcacaactgttgaa
gaaagtttcaagacattgttctgggctatatttggactctcagaagttaaatcagttgtc
atcaattataaacacaaatttattgaaaatactggttatgtcctttatggagtctataat
gttaccatggtcattgtcttactcaacatgcttattgcaatgatcaacagttcgttccag
gaaattgaggatgatgctgatgtagaatggaaatttgcaagggctaaactttggttttct
tactttgaggaagggagaactcttccagtacccttcaacttagtgccaagccccaaatct
ttgctttatgttctactcagaatcaaaaaatgtatttctaaaccatttctgtgccaaaag
aagagctttcaggaggatgcagagatgaacaagcttggtcaaaggaaacaatcaagtata
agaagctcagatgaaatccacttaaacagtttaaacaatcctccaaggcaataccagaaa
ataatgaagcgcctcattaaaagatatgtactgaaagctcagatagataaggagagtgat
gaagtcaatgaaggtgaactgaaggaaattaaacaggacatctcaagtctccgatatgaa
ctccttgaggaaaaatctcaaaattctgaggatctggcagaacttataaggaaacttggg
gaaaaactgtcaattgactctaaggaagaagaaagcgagagataa
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