Strigops habroptila (Kakapo): 115605351
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Entry
115605351 CDS
T08851
Symbol
CACNA2D1
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1 isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
shab
Strigops habroptila (Kakapo)
Pathway
shab04010
MAPK signaling pathway
shab04260
Cardiac muscle contraction
shab04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
shab00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115605351 (CACNA2D1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
115605351 (CACNA2D1)
04261 Adrenergic signaling in cardiomyocytes
115605351 (CACNA2D1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shab04040
]
115605351 (CACNA2D1)
Ion channels [BR:
shab04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
115605351 (CACNA2D1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
MCP-like_PDC_1
dCache_1
DUF3983
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
115605351
NCBI-ProteinID:
XP_030335478
LinkDB
All DBs
Position
3:10452642..10833693
Genome browser
AA seq
1087 aa
AA seq
DB search
MAAGWLLVFSLTLFHSLVMNHSSEGPFPSATTIKSWVDKMQEDLVTLARTASGVEQLAAI
YLKNRDLYTVEANNPRQLVEIAARDIEKLLSNRSKALVRLAKEAEKYQASHQWRDEFGNN
DIIYYNAKDDQNDPEKNDTESGSQRIRPVFEEDPVFRRQTSYQHAAVHIPTDIYEGSTIV
LNELNWTAALDDVFKRNREEDPTLLWQIFGSATGLARYYPASPWVDKSRTPNKIDLYDVR
RRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVIEMLETLSDDDFVNVVSFNSNAQ
NVSCFNHLVQANVRNKKKLKEAVYKISAKGITDYKKGFSYAFEQLLNHSVSRANCNKIIM
LFTDGGEERAQEIFHKYNEDKKVRVFTFSVGQHNYDKGPIQWMACENKGYYYEIPSIGAI
RINTQEYLDVLGRPMVLAGEKAKQVQWTNVYLDALELGLVITGTLPVFNLTKEQNGKINQ
LILGVMGVDVSLEDIKKLTPRFTLCPNGYYFAIDPNGYVLLHPNLQPKNPKSQEPVTLDF
LDAELENDIKVEIRKKMIDGESGEKTFETLVKSQDERYIDKGNRTYTWTAVNGTDYSLAL
VLPSYSFYYIKAKIEEPITQARLAIKKDSETLKLDNFDEAGYTFIAPREYCSDVKKSENN
TEFLLNFNEFIDRNTPSSPSCNTDMVIRVLLDAGFTNELAQNYWSKLSLDGVVAQFVVTD
GGITRVFPKRAGEDWLENAETYEVSFYKRSLDNDNYIFTAPYYNKSGANSYETGIMVSKA
VEITINGKLLKPAVVGIKIDATSWMENFTKTTIKSLCNSEICGCERNSMHVDCVILDDGG
FLLMSNRDEYTQQIGRFFGEIDPGLMRNLINMSLYAFNKSYDYQSVCDPEEEPKQGAGLR
SAYVPTITDILHLGWWASAAAWSILQQLFLSLTFPRFLEAADMEDDDFGAALPKTSCITE
QTQYFFENDDKSFGGIVDCINCSRLYHAEKISNTNLVFIISDSQLLCRSCDPKPLMQAEK
PDEGPNPCEMVKQPRYRKGPDVCFDEAKQEDSADCGGVSGLSPSLWSMVGIQLVLLWLLS
GSRHDQL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggctgctggctggctgctggtctttagcctgacacttttccactccctggtgatgaac
cactcctcggagggacctttcccctcagctaccacgataaaatcatgggtagataagatg
caagaagatctcgtaacattagcacgaactgcaagcggagtggaacagcttgctgcgatt
tatttgaaaaacagagatttgtatactgtagaagccaacaaccctcgtcagctcgtggaa
attgcagccagagacattgaaaaacttctgagtaacaggtctaaagccttggtgcgcctt
gctaaagaagcagagaagtaccaagcatcacatcagtggagggatgagtttgggaataat
gatataatctattacaatgcgaaagacgatcagaatgatcctgaaaagaatgacactgaa
tctggcagccagagaatcagaccagtatttgaagaagatcctgttttccgacggcaaaca
tcttaccaacatgcagcagtccacataccaacagatatttatgaaggctcaacgatagtg
ttaaatgaactcaactggactgcagcattggatgatgtattcaagcggaacagagaagaa
gaccccactttattatggcagatttttggtagtgcaactggcctcgctaggtattaccca
gcttccccatgggtagataaaagtcgaactccaaacaaaatagatctgtatgatgttcgt
agaagaccatggtatatccaaggagctgcatctcccaaagacatgcttattttagtcgat
gcgagcgggagtgtcagtggattgacgctgaagctgatccgcacctcagtcattgagatg
ttagagaccttgtctgacgatgactttgtgaacgtggtttcatttaacagtaatgctcag
aacgtcagttgctttaatcatcttgtccaagctaatgtgaggaacaagaagaagctgaaa
gaagctgtctataaaatctctgctaaaggaatcacagattacaaaaaaggctttagctat
gcatttgaacagctgctaaatcacagtgtctctagagctaactgcaataagattattatg
ttgtttacggatggtggtgaagaaagagcacaggaaattttccataaatacaatgaagac
aaaaaagtacgtgtgttcacattttctgttggtcagcataattatgacaaaggacctata
cagtggatggcctgtgaaaataaaggttattattatgaaattccgtccattggagccata
agaataaacacccaggaatatctggatgttttgggcagaccaatggttttagctggagag
aaggccaaacaagtccaatggacaaatgtctatctggatgctctggagctggggctcgtg
attacaggaaccctacctgtcttcaatctaacaaaggaacaaaatgggaaaataaatcag
ctgattcttggagtaatgggggttgatgtctctttggaggacataaaaaaactgacaccc
cgatttacgctttgtccaaacggatactattttgcaattgatcctaatgggtatgtgcta
cttcatccaaatctccaaccaaagaatcctaaatcccaggagcctgttacactggatttt
ctagacgctgaactggaaaatgatattaaagttgagattcggaaaaaaatgatagatgga
gaaagtggagaaaaaacatttgaaacactggtcaagtcccaagatgagagatacattgat
aaaggaaacagaacatatacatggactgctgtgaatggcactgattacagtttggcattg
gtgttaccatcatacagcttttattatattaaagccaaaatagaagaaccaataactcaa
gccagattggcaatcaaaaaggattcagaaacactgaagcttgataattttgatgaagct
ggctatacatttatagcaccaagagaatattgtagtgatgtaaaaaaatcagaaaacaac
actgaatttctattaaatttcaatgaatttattgacagaaatactccaagcagtccatca
tgtaatactgacatggtcattagagttttgctggatgcaggatttacaaatgaacttgcc
caaaattattggagtaaactgtctcttgatggcgttgttgcacaatttgttgttacagat
ggtggaattactagagtgttcccaaaaagggcaggagaagattggttggaaaatgctgaa
acttatgaagtcagcttctataaacggagtttagataatgacaactatattttcacagct
ccgtactacaacaaaagtggtgccaatagctacgaaacaggtattatggtaagcaaggct
gtggaaataacaattaatgggaagcttctgaaaccagcagttgttggaataaaaattgat
gcaaccagctggatggaaaatttcacaaaaaccacaatcaagagcctgtgcaacagtgaa
atctgtggctgtgagagaaacagtatgcatgtggactgtgttatccttgacgatggtgga
tttcttttgatgtcaaatcgggatgaatatacacaacagattggaagattctttggtgaa
attgatcctggcctgatgagaaacctgattaacatgtccctgtatgcctttaacaagtcg
tatgactatcaatcagtctgcgatcccgaagaagaaccaaagcaaggagctggacttcgt
tctgcttatgtgcctacgataacagatattttgcatctaggatggtgggcttcagcagct
gcctggtctatcttacagcagctgtttttgagcttgacttttccacgtttccttgaagca
gctgatatggaagatgatgattttggtgccgccctgcctaaaacaagctgtatcactgag
caaactcagtatttctttgaaaatgatgataaatccttcggtgggattgtagactgtata
aactgctccagactttatcatgcagagaagatttcaaacaccaatctagtattcattatt
agtgacagccaactgctgtgccgctcctgtgacccaaagccactgatgcaagcagagaag
ccggatgaagggccaaatccttgtgaaatggtcaaacaacctaggtatagaaaaggtcct
gatgtctgttttgatgaagccaaacaggaagattcggccgactgtggtggtgtctctggt
ctgagtccatcactgtggtctatggtaggaattcagttggtcctgctttggctgttatct
ggcagcagacacgaccagttatga
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