KEGG   Strigops habroptila (Kakapo): 115605825
Entry
115605825         CDS       T08851                                 
Symbol
RBX1
Name
(RefSeq) E3 ubiquitin-protein ligase RBX1 isoform X1
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
shab  Strigops habroptila (Kakapo)
Pathway
shab03420  Nucleotide excision repair
shab04110  Cell cycle
shab04114  Oocyte meiosis
shab04120  Ubiquitin mediated proteolysis
shab04141  Protein processing in endoplasmic reticulum
shab04310  Wnt signaling pathway
shab04350  TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:shab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    115605825 (RBX1)
   04120 Ubiquitin mediated proteolysis
    115605825 (RBX1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115605825 (RBX1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115605825 (RBX1)
   04350 TGF-beta signaling pathway
    115605825 (RBX1)
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    115605825 (RBX1)
   04114 Oocyte meiosis
    115605825 (RBX1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:shab04121]
    115605825 (RBX1)
   03400 DNA repair and recombination proteins [BR:shab03400]
    115605825 (RBX1)
Enzymes [BR:shab01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     115605825 (RBX1)
Ubiquitin system [BR:shab04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   115605825 (RBX1)
  Multi subunit type E3
   SCF complex
    Ring finger protein
     115605825 (RBX1)
   Cul2 complex
     115605825 (RBX1)
   Cul3 complex
     115605825 (RBX1)
   Cul4 complex
     115605825 (RBX1)
   Cul7 complex
     115605825 (RBX1)
   Cul8 complex
     115605825 (RBX1)
   Cul9 complex
     115605825 (RBX1)
DNA repair and recombination proteins [BR:shab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      115605825 (RBX1)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      115605825 (RBX1)
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 DUF8003 PHD_NSD
Other DBs
NCBI-GeneID: 115605825
NCBI-ProteinID: XP_030336706
UniProt: A0A672TQY7
LinkDB
Position
3:77321368..77332452
AA seq 108 aa
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq 327 nt   +upstreamnt  +downstreamnt
atggcggccgcgatggatgtggacacccctagcggcactaacagcggcgcgggcaagaag
cgcttcgaagtgaagaaatggaatgcagtagctctgtgggcttgggacattgtggttgat
aactgtgccatttgcagaaaccatattatggatctatgcatagaatgtcaagcgaaccaa
gcatcagctacctctgaagagtgcacggttgcatggggtgtctgcaatcatgctttccac
ttccactgcatctctcgctggctcaaaactcgccaagtatgtccgctggacaacagggaa
tgggagttccaaaagtatggacactag

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