Strigops habroptila (Kakapo): 115606662 Help Entry 115606662         CDS       T08851                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism shab  Strigops habroptila (Kakapo) Pathway shab04010   MAPK signaling pathway shab04120   Ubiquitin mediated proteolysis shab04140   Autophagy - animal shab04144   Endocytosis shab04517   IgSF CAM signaling shab04620   Toll-like receptor signaling pathway shab04621   NOD-like receptor signaling pathway shab04622   RIG-I-like receptor signaling pathway shab05132   Salmonella infection shab05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:shab00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115606662 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     115606662 (TRAF6)   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     115606662 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     115606662 (TRAF6)    04140 Autophagy - animal     115606662 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     115606662 (TRAF6)    04621 NOD-like receptor signaling pathway     115606662 (TRAF6)    04622 RIG-I-like receptor signaling pathway     115606662 (TRAF6)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     115606662 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     115606662 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:shab04131]     115606662 (TRAF6)    04121 Ubiquitin system [BR:shab04121]     115606662 (TRAF6) Enzymes [BR:shab01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      115606662 (TRAF6) Membrane trafficking [BR:shab04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     115606662 (TRAF6) Ubiquitin system [BR:shab04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     115606662 (TRAF6) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-TRAF_2 zf-C3HC4_4 Sina_ZnF zf-RING_5 SlyX Med21 RING_XB3-XBAT31 PspA_IM30 TRAF3_RING zf-RING_11 CCDC18_1st CEP104_ZnF DUF4455 CENP-F_leu_zip HAP1_N U-box UPF0242 PMD1-like ATG16 Spc29 zf-C2HC_3 DUF2247 DUF1664 DM DUF16 DUF8221 HMMR_N HAUS1 ADIP ZapB_rel Motif Other DBs NCBI-GeneID:  115606662 NCBI-ProteinID:  XP_030338843 UniProt:  A0A672UBK4 LinkDB All DBs Position 4:complement(59586094..59605372) Genome browser AA seq 543 aa AA seqDB search MSLLYSDNSSGAQDVESGCCAAMASACSAGVKEDSANSGTGNPQSSFTEETQGYDVEFDP PLESKYECPICLMALREAVQTPCGHRFCKGCIVKSIRDAGHKCPVDNEILLENQLFPDNF AKREILSLTVKCPNKGCSMKMELRHLEDHQLQCDFSTVECPQCQGAFQKNRLKEHITQEC PRRQVCCPNCATSMAYEDKELHDQTCPLANVFCEYCNTVLIREQMPNHYDNDCPTAPVPC FYSAFGCPEKMQRNELARHMQEFTQVHMRMMAQSFQNISVTATNPVPFINGLPFEPALFS HVSHATYDCNPEVENFKETIQQLEGRLVRQDHQIRELIAKMETQNTHMAELKRTIRNLEG KITEMEAQQCNGIYIWKIENFSGLQKAQEEERPVVMHSPGFYTGKPGYKLCLRLHIQLPN AQRCANFISLFVHTMQGEYDSHLPWPFQGTIRLSILDQSEGPERQNHEEVMEAKPELLAF QRPTIQRNPKGFGYVTFMHLQTLKQRTFVKDDTLLVRCEVLTRLDLNSLRREGFQARSAD GAM NT seq 1632 nt NT seq  +upstreamnt  +downstreamnt atgagcttactatacagtgataacagtagtggagcccaagacgtggagagcggctgctgc gcagccatggccagtgcctgcagcgctggagtaaaagaagacagtgccaacagtgggact ggaaaccctcagagttctttcacagaggaaacacaaggctatgatgtggagtttgacccc cccttggaaagtaaatatgaatgtccaatctgtttgatggctcttcgagaagcagtgcag acaccatgcggacaccgtttttgcaaaggctgcattgtcaaatccataagagatgcaggt cacaaatgtccagtagacaatgaaattctgcttgaaaatcaactttttcctgacaacttt gctaaacgggaaatcctttccttaacggtgaagtgtcctaacaagggctgcagtatgaag atggagctgaggcatttagaggaccatcagttgcagtgtgatttttccactgtggaatgc ccacagtgccagggagccttccagaagaaccgtctgaaagagcacataacacaggagtgt ccaaggcgtcaagtctgttgtccaaactgtgccacatctatggcctatgaagataaagag cttcatgaccaaacctgcccacttgccaatgtattttgtgaatattgcaacacagtgctc atcagagagcagatgcctaaccattatgacaatgattgtcctactgccccagtgccttgt ttttacagtgcctttgggtgtccagaaaagatgcaaaggaatgaactggcacgacacatg caggagttcactcaggttcacatgagaatgatggctcagagttttcaaaatatcagtgtt actgctacaaatcctgtacccttcatcaatggcttaccctttgagcctgccctcttctca catgtgtcacatgccacatatgattgtaatccagaagttgaaaacttcaaagaaactatt cagcagttggaaggtcgtctggtaagacaagatcaccaaatcagagaactcattgctaaa atggagactcagaacactcacatggcagaactcaaacgtactatccgaaatttggaggga aagattactgaaatggaagcacagcaatgtaatggtatttatatctggaagattgagaac ttcagtggacttcagaaagcccaggaagaagagagacctgttgtgatgcacagtcctggc ttctatactggaaagccaggctacaagctgtgtttgcgcctgcatatccagttaccaaat gctcagcggtgtgctaattttatttctctgtttgtccacactatgcaaggagaatatgac agccatctgccttggcctttccaaggcactatacgactttctattttggatcagtcggaa ggccctgagaggcagaatcatgaagaagtaatggaagccaagccagagttactagccttc cagagaccaacaattcagcgcaatccaaaagggtttggttatgtgactttcatgcacctg caaaccttgaaacaaagaacctttgtaaaggacgatacgcttctggtgcgctgtgaagtt ctaacacgtctagatttaaacagtctccgcagagagggatttcaagctcgcagtgctgat ggagctatgtag

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